RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 ISOC2Q96AB3 205 aa6.59□□□□□ -1.35
SCARB2-225ENST00000640900 PYGO2Q9BRQ0 406 aa6.59□□□□□ -1.35
SCARB2-225ENST00000640900 BIN3Q9NQY0 253 aa6.59□□□□□ -1.35
SCARB2-225ENST00000640900 PLAC8L1A1L4L8 177 aa6.58□□□□□ -1.36
SCARB2-225ENST00000640900 SMIM9A6NGZ8 99 aa6.58□□□□□ -1.36
SCARB2-225ENST00000640900 KRBOX1C9JBD0 128 aa6.58□□□□□ -1.36
SCARB2-225ENST00000640900 SPRY2O43597 315 aa6.58□□□□□ -1.36
SCARB2-225ENST00000640900 CXCL1P09341 107 aa6.58□□□□□ -1.36
SCARB2-225ENST00000640900 CEBPGP53567 150 aa6.58□□□□□ -1.36
SCARB2-225ENST00000640900 PNRC1Q12796 327 aaPredicted RBP6.58□□□□□ -1.36
SCARB2-225ENST00000640900 OR5I1Q13606 314 aa6.58□□□□□ -1.36
SCARB2-225ENST00000640900 ANXA2RQ3ZCQ2 193 aa6.58□□□□□ -1.36
SCARB2-225ENST00000640900 NIPSNAP3BQ9BS92 247 aa6.58□□□□□ -1.36
SCARB2-225ENST00000640900 OSTCQ9NRP0 149 aa6.58□□□□□ -1.36
SCARB2-225ENST00000640900 GOLT1BQ9Y3E0 138 aa6.58□□□□□ -1.36
SCARB2-225ENST00000640900 DYNC2H1Q8NCM8 4307 aaKnown RBP6.58□□□□□ -1.36
SCARB2-225ENST00000640900 DNAH7Q8WXX0 4024 aa6.57□□□□□ -1.36
SCARB2-225ENST00000640900 STAB2Q8WWQ8 2551 aa6.57□□□□□ -1.36
SCARB2-225ENST00000640900 IGHV1OR15-1A0A075B7D0 117 aa6.57□□□□□ -1.36
SCARB2-225ENST00000640900 DEFB135Q30KP9 77 aa6.57□□□□□ -1.36
SCARB2-225ENST00000640900 DEFB121Q5J5C9 76 aa6.57□□□□□ -1.36
SCARB2-225ENST00000640900 Q8NAQ8 132 aa6.57□□□□□ -1.36
SCARB2-225ENST00000640900 C11orf72Q8NBR9 251 aa6.57□□□□□ -1.36
SCARB2-225ENST00000640900 NUDT10Q8NFP7 164 aa6.57□□□□□ -1.36
SCARB2-225ENST00000640900 IL17DQ8TAD2 202 aa6.57□□□□□ -1.36
SCARB2-225ENST00000640900 RNASE8Q8TDE3 154 aaKnown RBP6.57□□□□□ -1.36
SCARB2-225ENST00000640900 NUDT11Q96G61 164 aa6.57□□□□□ -1.36
SCARB2-225ENST00000640900 RCHY1Q96PM5 261 aa6.57□□□□□ -1.36
SCARB2-225ENST00000640900 F8W036 122 aa6.56□□□□□ -1.36
SCARB2-225ENST00000640900 J3KRW8 73 aa6.56□□□□□ -1.36
SCARB2-225ENST00000640900 CT83Q5H943 113 aa6.56□□□□□ -1.36
SCARB2-225ENST00000640900 SFRP2Q96HF1 295 aa6.56□□□□□ -1.36
SCARB2-225ENST00000640900 KCNS1Q96KK3 526 aa6.56□□□□□ -1.36
SCARB2-225ENST00000640900 SPATA25Q9BR10 227 aa6.56□□□□□ -1.36
SCARB2-225ENST00000640900 SSBP4Q9BWG4 385 aaPredicted RBP6.56□□□□□ -1.36
SCARB2-225ENST00000640900 SCRT2Q9NQ03 307 aa6.56□□□□□ -1.36
SCARB2-225ENST00000640900 V9GYV3 84 aa6.56□□□□□ -1.36
SCARB2-225ENST00000640900 IGHV3-16A0A0C4DH30 117 aa6.55□□□□□ -1.36
SCARB2-225ENST00000640900 PRM2P04554 102 aa6.55□□□□□ -1.36
SCARB2-225ENST00000640900 TYMSP04818 313 aa6.55□□□□□ -1.36
SCARB2-225ENST00000640900 NHLRC4P0CG21 123 aaPredicted RBP6.55□□□□□ -1.36
SCARB2-225ENST00000640900 MGST1P10620 155 aaKnown RBP6.55□□□□□ -1.36
SCARB2-225ENST00000640900 AZU1P20160 251 aa6.55□□□□□ -1.36
SCARB2-225ENST00000640900 FOXA3P55318 350 aaPredicted RBP6.55□□□□□ -1.36
SCARB2-225ENST00000640900 IBA57Q5T440 356 aaKnown RBP6.55□□□□□ -1.36
SCARB2-225ENST00000640900 ZNF493Q6ZR52 646 aa6.55□□□□□ -1.36
SCARB2-225ENST00000640900 OR11H2Q8NH07 326 aa6.55□□□□□ -1.36
SCARB2-225ENST00000640900 PTH2Q96A98 100 aa6.55□□□□□ -1.36
SCARB2-225ENST00000640900 C9orf85Q96MD7 179 aa6.55□□□□□ -1.36
SCARB2-225ENST00000640900 LINC01587Q99440 93 aa6.55□□□□□ -1.36
SCARB2-225ENST00000640900 RNASE7Q9H1E1 156 aaKnown RBP6.55□□□□□ -1.36
SCARB2-225ENST00000640900 FAM231BA6NCW3 169 aa6.54□□□□□ -1.36
SCARB2-225ENST00000640900 ZNF705GA8MUZ8 300 aaPredicted RBP6.54□□□□□ -1.36
SCARB2-225ENST00000640900 B4DEV8 164 aa6.54□□□□□ -1.36
SCARB2-225ENST00000640900 GNRH2O43555 120 aa6.54□□□□□ -1.36
SCARB2-225ENST00000640900 SNAI2O43623 268 aa6.54□□□□□ -1.36
SCARB2-225ENST00000640900 P01737 135 aa6.54□□□□□ -1.36
SCARB2-225ENST00000640900 IGLC6P0CF74 106 aa6.54□□□□□ -1.36
SCARB2-225ENST00000640900 MED14OSP0DP75 135 aa6.54□□□□□ -1.36
SCARB2-225ENST00000640900 RNASE3P12724 160 aaKnown RBP6.54□□□□□ -1.36
SCARB2-225ENST00000640900 MIFP14174 115 aa6.54□□□□□ -1.36
SCARB2-225ENST00000640900 RPL19P84098 196 aaKnown RBP6.54□□□□□ -1.36
SCARB2-225ENST00000640900 DAZ2Q13117 558 aaKnown RBP6.54□□□□□ -1.36
SCARB2-225ENST00000640900 ADIRFQ15847 76 aa6.54□□□□□ -1.36
SCARB2-225ENST00000640900 MUC21Q5SSG8 566 aa6.54□□□□□ -1.36
SCARB2-225ENST00000640900 PRR27Q6MZM9 219 aa6.54□□□□□ -1.36
SCARB2-225ENST00000640900 FAM159AQ6UWV7 190 aa6.54□□□□□ -1.36
SCARB2-225ENST00000640900 LINC00612Q8N6U2 182 aa6.54□□□□□ -1.36
SCARB2-225ENST00000640900 TMEM263Q8WUH6 116 aaKnown RBP6.54□□□□□ -1.36
SCARB2-225ENST00000640900 CNFNQ9BYD5 112 aa6.54□□□□□ -1.36
SCARB2-225ENST00000640900 C11orf68Q9H3H3 251 aaKnown RBP6.54□□□□□ -1.36
SCARB2-225ENST00000640900 RPP21Q9H633 154 aaKnown RBP6.54□□□□□ -1.36
SCARB2-225ENST00000640900 RETNQ9HD89 108 aa6.54□□□□□ -1.36
SCARB2-225ENST00000640900 MUC4Q99102 2169 aa6.53□□□□□ -1.36
SCARB2-225ENST00000640900 TRGV11A0A075B6L2 103 aa6.53□□□□□ -1.36
SCARB2-225ENST00000640900 A0A087WWC5 75 aa6.53□□□□□ -1.36
SCARB2-225ENST00000640900 TMEM238LA0A1B0GVL6 79 aa6.53□□□□□ -1.36
SCARB2-225ENST00000640900 TMEM189A5PLL7 270 aa6.53□□□□□ -1.36
SCARB2-225ENST00000640900 NXPH4O95158 308 aa6.53□□□□□ -1.36
SCARB2-225ENST00000640900 ORM1P02763 201 aa6.53□□□□□ -1.36
SCARB2-225ENST00000640900 OR5AL1P0C617 328 aa6.53□□□□□ -1.36
SCARB2-225ENST00000640900 TCL1AP56279 114 aa6.53□□□□□ -1.36
SCARB2-225ENST00000640900 ERVFC1-1P60608 527 aa6.53□□□□□ -1.36
SCARB2-225ENST00000640900 RPS20P60866 119 aaKnown RBP6.53□□□□□ -1.36
SCARB2-225ENST00000640900 RRN3P1Q2M238 152 aa6.53□□□□□ -1.36
SCARB2-225ENST00000640900 PIK3CD-AS1Q5SR53 167 aa6.53□□□□□ -1.36
SCARB2-225ENST00000640900 CLRN3Q8NCR9 226 aa6.53□□□□□ -1.36
SCARB2-225ENST00000640900 OR2D3Q8NGH3 330 aa6.53□□□□□ -1.36
SCARB2-225ENST00000640900 OR10G8Q8NGN5 311 aa6.53□□□□□ -1.36
SCARB2-225ENST00000640900 GTSF1Q8WW33 167 aa6.53□□□□□ -1.36
SCARB2-225ENST00000640900 ANAPC16Q96DE5 110 aa6.53□□□□□ -1.36
SCARB2-225ENST00000640900 DAZAP1Q96EP5 407 aaKnown RBP6.53□□□□□ -1.36
SCARB2-225ENST00000640900 C16orf74Q96GX8 76 aa6.53□□□□□ -1.36
SCARB2-225ENST00000640900 GFRA4Q9GZZ7 299 aa6.53□□□□□ -1.36
SCARB2-225ENST00000640900 TMEM242Q9NWH2 141 aa6.53□□□□□ -1.36
SCARB2-225ENST00000640900 IL36BQ9NZH7 164 aa6.53□□□□□ -1.36
SCARB2-225ENST00000640900 MDFICQ9P1T7 246 aa6.53□□□□□ -1.36
SCARB2-225ENST00000640900 IGHV4-4A0A075B6R2 117 aa6.52□□□□□ -1.37
SCARB2-225ENST00000640900 IGHV4-28A0A0C4DH34 117 aa6.52□□□□□ -1.37
SCARB2-225ENST00000640900 SMIM27A0A1W2PRY6 76 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 170.9 ms