RNA–Protein interactions for RNA: ENST00000639848.1

HLA-B-256, Transcript of major histocompatibility complex, class I, B, human

BASIC

Gene HLA-B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-B-256	ENST00000639848	PEX7	O00628	323 aa		14.09	□□□□□ -0.15
HLA-B-256	ENST00000639848	CCL18	P55774	89 aa		14.09	□□□□□ -0.15
HLA-B-256	ENST00000639848	PRNT	Q86SH4	94 aa		14.09	□□□□□ -0.15
HLA-B-256	ENST00000639848	MBD3L1	Q8WWY6	194 aa		14.09	□□□□□ -0.15
HLA-B-256	ENST00000639848	RASL10A	Q92737	203 aa		14.09	□□□□□ -0.15
HLA-B-256	ENST00000639848	SDF2L1	Q9HCN8	221 aa		14.09	□□□□□ -0.15
HLA-B-256	ENST00000639848	IGHV3-16	A0A0C4DH30	117 aa		14.08	□□□□□ -0.16
HLA-B-256	ENST00000639848	GCG	P01275	180 aa		14.08	□□□□□ -0.16
HLA-B-256	ENST00000639848	PFN1	P07737	140 aa	Known RBP	14.08	□□□□□ -0.16
HLA-B-256	ENST00000639848	SLA	Q13239	276 aa		14.08	□□□□□ -0.16
HLA-B-256	ENST00000639848	FAM213B	Q8TBF2	198 aa		14.08	□□□□□ -0.16
HLA-B-256	ENST00000639848	C8orf49	Q96NF6	230 aa		14.08	□□□□□ -0.16
HLA-B-256	ENST00000639848		A0A0J9YY99	117 aa		14.07	□□□□□ -0.16
HLA-B-256	ENST00000639848	ZNF80	P51504	273 aa	Predicted RBP	14.07	□□□□□ -0.16
HLA-B-256	ENST00000639848	SFT2D1	Q8WV19	159 aa		14.07	□□□□□ -0.16
HLA-B-256	ENST00000639848	LINC00479	Q96M42	142 aa		14.07	□□□□□ -0.16
HLA-B-256	ENST00000639848	GNRH2	O43555	120 aa		14.06	□□□□□ -0.16
HLA-B-256	ENST00000639848	TYMS	P04818	313 aa		14.06	□□□□□ -0.16
HLA-B-256	ENST00000639848	VSIG2	Q96IQ7	327 aa		14.06	□□□□□ -0.16
HLA-B-256	ENST00000639848	TRAV34	A0A0B4J273	112 aa		14.05	□□□□□ -0.16
HLA-B-256	ENST00000639848		M0R2P5	195 aa		14.05	□□□□□ -0.16
HLA-B-256	ENST00000639848	C1QB	P02746	253 aa		14.05	□□□□□ -0.16
HLA-B-256	ENST00000639848	LGALSL	Q3ZCW2	172 aa	Predicted RBP	14.05	□□□□□ -0.16
HLA-B-256	ENST00000639848	EIF5AL1	Q6IS14	154 aa	Known RBP	14.05	□□□□□ -0.16
HLA-B-256	ENST00000639848		Q6ZR54	194 aa		14.05	□□□□□ -0.16
HLA-B-256	ENST00000639848		Q86TA4	180 aa		14.05	□□□□□ -0.16
HLA-B-256	ENST00000639848	PRO0255	Q9UI72	69 aa		14.05	□□□□□ -0.16
HLA-B-256	ENST00000639848	H2AFB1	P0C5Y9	115 aa		14.04	□□□□□ -0.16
HLA-B-256	ENST00000639848	CST9LP1	Q5W188	147 aa		14.04	□□□□□ -0.16
HLA-B-256	ENST00000639848	ZNRF2	Q8NHG8	242 aa		14.04	□□□□□ -0.16
HLA-B-256	ENST00000639848	FMC1	Q96HJ9	113 aa		14.04	□□□□□ -0.16
HLA-B-256	ENST00000639848	C11orf21	Q9P2W6	132 aa		14.04	□□□□□ -0.16
HLA-B-256	ENST00000639848	ZFP30	Q9Y2G7	519 aa		14.04	□□□□□ -0.16
HLA-B-256	ENST00000639848	LINC00588	Q9Y4M8	146 aa		14.04	□□□□□ -0.16
HLA-B-256	ENST00000639848	DNAH10	Q8IVF4	4471 aa		14.03	□□□□□ -0.16
HLA-B-256	ENST00000639848	IGLV2-18	A0A075B6J9	118 aa		14.03	□□□□□ -0.16
HLA-B-256	ENST00000639848	TRBV6-1	A0A0K0K1D8	114 aa		14.03	□□□□□ -0.16
HLA-B-256	ENST00000639848	IGHV3-53	P01767	116 aa		14.03	□□□□□ -0.16
HLA-B-256	ENST00000639848	RAB5C	P51148	216 aa		14.03	□□□□□ -0.16
HLA-B-256	ENST00000639848	FHL2	Q14192	279 aa		14.03	□□□□□ -0.16
HLA-B-256	ENST00000639848	LINC00336	Q6ZUF6	198 aa		14.03	□□□□□ -0.16
HLA-B-256	ENST00000639848	COX8C	Q7Z4L0	72 aa		14.03	□□□□□ -0.16
HLA-B-256	ENST00000639848	FRAS1	Q86XX4	4008 aa		14.02	□□□□□ -0.16
HLA-B-256	ENST00000639848		M0R2N4	97 aa		14.02	□□□□□ -0.17
HLA-B-256	ENST00000639848	PAX4	O43316	350 aa		14.02	□□□□□ -0.17
HLA-B-256	ENST00000639848	PAGE4	O60829	102 aa		14.02	□□□□□ -0.17
HLA-B-256	ENST00000639848	HHLA3	Q9XRX5	114 aa		14.02	□□□□□ -0.17
HLA-B-256	ENST00000639848		A0A096LPF7	62 aa		14.01	□□□□□ -0.17
HLA-B-256	ENST00000639848	TRAV4	A0A0B4J268	109 aa		14.01	□□□□□ -0.17
HLA-B-256	ENST00000639848	FABP5P3	A8MUU1	101 aa		14.01	□□□□□ -0.17
HLA-B-256	ENST00000639848	CRYBA4	P53673	196 aa		14.01	□□□□□ -0.17
HLA-B-256	ENST00000639848	UBE2G1	P62253	170 aa		14.01	□□□□□ -0.17
HLA-B-256	ENST00000639848	TRGV4	A0A0C4DH28	118 aa		14	□□□□□ -0.17
HLA-B-256	ENST00000639848	AKAP14	Q86UN6	197 aa		14	□□□□□ -0.17
HLA-B-256	ENST00000639848	ZNF479	Q96JC4	524 aa		14	□□□□□ -0.17
HLA-B-256	ENST00000639848	UPK3B	Q9BT76	320 aa		14	□□□□□ -0.17
HLA-B-256	ENST00000639848	ICOS	Q9Y6W8	199 aa		14	□□□□□ -0.17
HLA-B-256	ENST00000639848	BIRC6	Q9NR09	4857 aa		13.99	□□□□□ -0.17
HLA-B-256	ENST00000639848	TRAV1-1	A0A0B4J248	108 aa		13.99	□□□□□ -0.17
HLA-B-256	ENST00000639848	ESRG	Q1W209	222 aa		13.99	□□□□□ -0.17
HLA-B-256	ENST00000639848	SLC51B	Q86UW2	128 aa		13.99	□□□□□ -0.17
HLA-B-256	ENST00000639848	OR4C5	Q8NGB2	326 aa		13.99	□□□□□ -0.17
HLA-B-256	ENST00000639848	PTH2	Q96A98	100 aa		13.99	□□□□□ -0.17
HLA-B-256	ENST00000639848	C9orf85	Q96MD7	179 aa		13.99	□□□□□ -0.17
HLA-B-256	ENST00000639848	MRPS16	Q9Y3D3	137 aa	Known RBP	13.99	□□□□□ -0.17
HLA-B-256	ENST00000639848	MUC4	Q99102	2169 aa		13.98	□□□□□ -0.17
HLA-B-256	ENST00000639848		A0A1B0GV50	99 aa		13.98	□□□□□ -0.17
HLA-B-256	ENST00000639848	LTA	P01374	205 aa		13.98	□□□□□ -0.17
HLA-B-256	ENST00000639848	S100A9	P06702	114 aa	Known RBP	13.98	□□□□□ -0.17
HLA-B-256	ENST00000639848	SFTA3	P0C7M3	94 aa		13.98	□□□□□ -0.17
HLA-B-256	ENST00000639848	ZNF876P	Q49A33	203 aa		13.98	□□□□□ -0.17
HLA-B-256	ENST00000639848	IGKV3D-20	A0A0C4DH25	116 aa		13.97	□□□□□ -0.17
HLA-B-256	ENST00000639848	NBDY	A0A0U1RRE5	68 aa		13.97	□□□□□ -0.17
HLA-B-256	ENST00000639848	TEX46	H3BTG2	121 aa		13.97	□□□□□ -0.17
HLA-B-256	ENST00000639848	CIDEA	O60543	219 aa		13.97	□□□□□ -0.17
HLA-B-256	ENST00000639848	AKR1C3	P42330	323 aa		13.97	□□□□□ -0.17
HLA-B-256	ENST00000639848	SULT1A2	P50226	295 aa		13.97	□□□□□ -0.17
HLA-B-256	ENST00000639848	MRPL23	Q16540	153 aa	Known RBP	13.97	□□□□□ -0.17
HLA-B-256	ENST00000639848	SOHLH1	Q5JUK2	328 aa		13.97	□□□□□ -0.17
HLA-B-256	ENST00000639848	ZC2HC1A	Q96GY0	325 aa		13.97	□□□□□ -0.17
HLA-B-256	ENST00000639848	NACA	E9PAV3	2078 aa		13.97	□□□□□ -0.17
HLA-B-256	ENST00000639848	RTL8C	O15255	209 aa		13.96	□□□□□ -0.17
HLA-B-256	ENST00000639848	ORM1	P02763	201 aa		13.96	□□□□□ -0.17
HLA-B-256	ENST00000639848	RNASE3	P12724	160 aa	Known RBP	13.96	□□□□□ -0.17
HLA-B-256	ENST00000639848	FAM162B	Q5T6X4	162 aa		13.96	□□□□□ -0.17
HLA-B-256	ENST00000639848		Q9H8V8	135 aa		13.96	□□□□□ -0.17
HLA-B-256	ENST00000639848	MANBAL	Q9NQG1	85 aa		13.96	□□□□□ -0.17
HLA-B-256	ENST00000639848	hCG_2014768	A0A024R1R8	64 aa		13.95	□□□□□ -0.18
HLA-B-256	ENST00000639848		C9JCJ5	164 aa		13.95	□□□□□ -0.18
HLA-B-256	ENST00000639848	CRIP1	P50238	77 aa		13.95	□□□□□ -0.18
HLA-B-256	ENST00000639848	PIK3CD-AS1	Q5SR53	167 aa		13.95	□□□□□ -0.18
HLA-B-256	ENST00000639848	C1orf134	Q5TEV5	83 aa		13.95	□□□□□ -0.18
HLA-B-256	ENST00000639848	SCO2	A0A1W2PP80	73 aa		13.94	□□□□□ -0.18
HLA-B-256	ENST00000639848		B4DEV8	164 aa		13.94	□□□□□ -0.18
HLA-B-256	ENST00000639848	S100A4	P26447	101 aa	Known RBP	13.94	□□□□□ -0.18
HLA-B-256	ENST00000639848	ASIP	P42127	132 aa		13.94	□□□□□ -0.18
HLA-B-256	ENST00000639848	ZNF674	Q2M3X9	581 aa		13.94	□□□□□ -0.18
HLA-B-256	ENST00000639848	TTC32	Q5I0X7	151 aa		13.94	□□□□□ -0.18
HLA-B-256	ENST00000639848	DNLZ	Q5SXM8	178 aa		13.94	□□□□□ -0.18
HLA-B-256	ENST00000639848	TXNDC17	Q9BRA2	123 aa		13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms