RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 Q6ZVH6 145 aa11.3□□□□□ -0.6
SCARB2-216ENST00000639300 SPXQ9BT56 116 aa11.3□□□□□ -0.6
SCARB2-216ENST00000639300 FN1P02751 2386 aaKnown RBP11.3□□□□□ -0.6
SCARB2-216ENST00000639300 GAGE12BA1L429 117 aa11.3□□□□□ -0.6
SCARB2-216ENST00000639300 ZNF415Q09FC8 603 aa11.3□□□□□ -0.6
SCARB2-216ENST00000639300 TMEM95Q3KNT9 176 aa11.3□□□□□ -0.6
SCARB2-216ENST00000639300 TCTEX1D4Q5JR98 221 aa11.3□□□□□ -0.6
SCARB2-216ENST00000639300 TP53TG1Q9Y2A0 90 aa11.3□□□□□ -0.6
SCARB2-216ENST00000639300 LINC01549A6NIU2 74 aa11.3□□□□□ -0.6
SCARB2-216ENST00000639300 TTC32Q5I0X7 151 aa11.3□□□□□ -0.6
SCARB2-216ENST00000639300 Q8N8P6 123 aa11.3□□□□□ -0.6
SCARB2-216ENST00000639300 MRPL35Q9NZE8 188 aaKnown RBP11.3□□□□□ -0.6
SCARB2-216ENST00000639300 Q5PR19 223 aa11.29□□□□□ -0.6
SCARB2-216ENST00000639300 PTPRSQ13332 1948 aa11.29□□□□□ -0.6
SCARB2-216ENST00000639300 IGLV11-55A0A075B6I3 123 aa11.29□□□□□ -0.6
SCARB2-216ENST00000639300 TRAV8-2A0A0B4J237 113 aa11.29□□□□□ -0.6
SCARB2-216ENST00000639300 LRRK2Q5S007 2527 aa11.29□□□□□ -0.6
SCARB2-216ENST00000639300 TEX22C9J3V5 150 aa11.29□□□□□ -0.6
SCARB2-216ENST00000639300 RPL36AP83881 106 aaKnown RBP11.29□□□□□ -0.6
SCARB2-216ENST00000639300 Q8N7P7 452 aa11.29□□□□□ -0.6
SCARB2-216ENST00000639300 RPL36ALQ969Q0 106 aaKnown RBP11.29□□□□□ -0.6
SCARB2-216ENST00000639300 IGHV3-16A0A0C4DH30 117 aa11.28□□□□□ -0.6
SCARB2-216ENST00000639300 SDHAF1A6NFY7 115 aa11.28□□□□□ -0.6
SCARB2-216ENST00000639300 ADARB2-AS1A8MUL3 147 aa11.28□□□□□ -0.6
SCARB2-216ENST00000639300 GATA3P23771 443 aa11.28□□□□□ -0.6
SCARB2-216ENST00000639300 ERG28Q9UKR5 140 aa11.28□□□□□ -0.6
SCARB2-216ENST00000639300 NUP210LQ5VU65 1888 aa11.28□□□□□ -0.6
SCARB2-216ENST00000639300 IGHV4-59P01825 116 aa11.28□□□□□ -0.6
SCARB2-216ENST00000639300 DKK2Q9UBU2 259 aa11.28□□□□□ -0.6
SCARB2-216ENST00000639300 TRAV13-1A0A0B4J241 112 aa11.28□□□□□ -0.6
SCARB2-216ENST00000639300 ESDP10768 282 aa11.28□□□□□ -0.6
SCARB2-216ENST00000639300 ZNF503Q96F45 646 aa11.28□□□□□ -0.6
SCARB2-216ENST00000639300 ZFP36P26651 326 aaKnown RBP11.28□□□□□ -0.6
SCARB2-216ENST00000639300 IGF2BP2-AS1Q96M15 143 aa11.28□□□□□ -0.6
SCARB2-216ENST00000639300 ZNF747Q9BV97 191 aa11.28□□□□□ -0.6
SCARB2-216ENST00000639300 MRPL52Q86TS9 123 aaKnown RBP11.27□□□□□ -0.6
SCARB2-216ENST00000639300 GTSF1Q8WW33 167 aa11.27□□□□□ -0.6
SCARB2-216ENST00000639300 PKD1L2Q7Z442 2459 aa11.27□□□□□ -0.6
SCARB2-216ENST00000639300 GNRH2O43555 120 aa11.27□□□□□ -0.61
SCARB2-216ENST00000639300 Q8N9W7 124 aa11.27□□□□□ -0.61
SCARB2-216ENST00000639300 WIPF2Q8TF74 440 aaPredicted RBP11.27□□□□□ -0.61
SCARB2-216ENST00000639300 IGHV4-38-2P0DP08 117 aa11.27□□□□□ -0.61
SCARB2-216ENST00000639300 PAX2Q02962 417 aa11.27□□□□□ -0.61
SCARB2-216ENST00000639300 PGPEP1Q9NXJ5 209 aa11.27□□□□□ -0.61
SCARB2-216ENST00000639300 CFHR4Q92496 578 aa11.26□□□□□ -0.61
SCARB2-216ENST00000639300 NRGNQ92686 78 aa11.26□□□□□ -0.61
SCARB2-216ENST00000639300 SMIM2Q9BVW6 85 aa11.26□□□□□ -0.61
SCARB2-216ENST00000639300 Q96MF0 132 aa11.26□□□□□ -0.61
SCARB2-216ENST00000639300 COX8AP10176 69 aa11.26□□□□□ -0.61
SCARB2-216ENST00000639300 ZNF625Q96I27 306 aaPredicted RBP11.26□□□□□ -0.61
SCARB2-216ENST00000639300 SCGB1A1P11684 91 aa11.26□□□□□ -0.61
SCARB2-216ENST00000639300 DEFB112Q30KQ8 113 aa11.26□□□□□ -0.61
SCARB2-216ENST00000639300 LGALS9BQ3B8N2 356 aa11.26□□□□□ -0.61
SCARB2-216ENST00000639300 LGALS9CQ6DKI2 356 aa11.26□□□□□ -0.61
SCARB2-216ENST00000639300 IGHV7-4-1A0A0J9YVY3 117 aa11.25□□□□□ -0.61
SCARB2-216ENST00000639300 INSP01308 110 aa11.25□□□□□ -0.61
SCARB2-216ENST00000639300 MTURNQ8N3F0 131 aa11.25□□□□□ -0.61
SCARB2-216ENST00000639300 NPBQ8NG41 125 aa11.25□□□□□ -0.61
SCARB2-216ENST00000639300 IGHV4-30-2A0A087WSY4 118 aa11.25□□□□□ -0.61
SCARB2-216ENST00000639300 TMEM238C9JI98 176 aa11.25□□□□□ -0.61
SCARB2-216ENST00000639300 PRAC2D3DTV9 90 aa11.25□□□□□ -0.61
SCARB2-216ENST00000639300 IGHV1OR15-1A0A075B7D0 117 aa11.25□□□□□ -0.61
SCARB2-216ENST00000639300 A8MWV9 139 aa11.25□□□□□ -0.61
SCARB2-216ENST00000639300 IGKV1D-37A0A075B6S9 117 aa11.25□□□□□ -0.61
SCARB2-216ENST00000639300 CDKN1BP46527 198 aa11.25□□□□□ -0.61
SCARB2-216ENST00000639300 MTORP42345 2549 aa11.24□□□□□ -0.61
SCARB2-216ENST00000639300 BUB3O43684 328 aa11.24□□□□□ -0.61
SCARB2-216ENST00000639300 DEFB130BP0DP73 79 aa11.24□□□□□ -0.61
SCARB2-216ENST00000639300 DEFB130AP0DP74 79 aa11.24□□□□□ -0.61
SCARB2-216ENST00000639300 DAZAP2Q15038 168 aaPredicted RBP11.24□□□□□ -0.61
SCARB2-216ENST00000639300 PLEKHB2Q96CS7 222 aa11.24□□□□□ -0.61
SCARB2-216ENST00000639300 KIR2DL5BA0A0G2JN68 375 aa11.24□□□□□ -0.61
SCARB2-216ENST00000639300 KIR2DL5BA0A0G2JPC4 375 aa11.24□□□□□ -0.61
SCARB2-216ENST00000639300 DEFB1P60022 68 aa11.24□□□□□ -0.61
SCARB2-216ENST00000639300 KIR2DL5AQ8N109 375 aa11.24□□□□□ -0.61
SCARB2-216ENST00000639300 C11orf68Q9H3H3 251 aaKnown RBP11.24□□□□□ -0.61
SCARB2-216ENST00000639300 LINC00158P58513 81 aa11.23□□□□□ -0.61
SCARB2-216ENST00000639300 KLF5Q13887 457 aaPredicted RBP11.23□□□□□ -0.61
SCARB2-216ENST00000639300 TRPT1Q86TN4 253 aaKnown RBP11.23□□□□□ -0.61
SCARB2-216ENST00000639300 CFHR3Q02985 330 aa11.23□□□□□ -0.61
SCARB2-216ENST00000639300 IGHV3-38A0A0C4DH36 116 aa11.23□□□□□ -0.61
SCARB2-216ENST00000639300 CFAP161Q6P656 301 aa11.23□□□□□ -0.61
SCARB2-216ENST00000639300 LY6G5BQ8NDX9 201 aa11.23□□□□□ -0.61
SCARB2-216ENST00000639300 M0R2P5 195 aa11.22□□□□□ -0.61
SCARB2-216ENST00000639300 FANCD2OSQ96PS1 177 aa11.22□□□□□ -0.61
SCARB2-216ENST00000639300 INS-IGF2F8WCM5 200 aa11.22□□□□□ -0.61
SCARB2-216ENST00000639300 EIF4EBP1Q13541 118 aaPredicted RBP11.22□□□□□ -0.61
SCARB2-216ENST00000639300 DEFB136Q30KP8 78 aa11.22□□□□□ -0.61
SCARB2-216ENST00000639300 KLF12Q9Y4X4 402 aa11.22□□□□□ -0.61
SCARB2-216ENST00000639300 EML5Q05BV3 1969 aa11.22□□□□□ -0.61
SCARB2-216ENST00000639300 A0A087WX48 190 aa11.22□□□□□ -0.61
SCARB2-216ENST00000639300 PRB1P04280 392 aa11.22□□□□□ -0.61
SCARB2-216ENST00000639300 CRYGCP07315 174 aa11.22□□□□□ -0.61
SCARB2-216ENST00000639300 PCP2Q8IVA1 136 aa11.22□□□□□ -0.61
SCARB2-216ENST00000639300 TIMM21Q9BVV7 248 aa11.22□□□□□ -0.61
SCARB2-216ENST00000639300 BVES-AS1Q5T3Y7 98 aa11.21□□□□□ -0.61
SCARB2-216ENST00000639300 PRADC1Q9BSG0 188 aa11.21□□□□□ -0.61
SCARB2-216ENST00000639300 F8VRH5 84 aa11.21□□□□□ -0.61
SCARB2-216ENST00000639300 MALP21145 153 aa11.21□□□□□ -0.61
SCARB2-216ENST00000639300 AJUBAQ96IF1 538 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms