RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 H7C1H1 209 aa9.42□□□□□ -0.9
GFAP-228ENST00000638488 CRLF1O75462 422 aa9.42□□□□□ -0.9
GFAP-228ENST00000638488 CD3EP07766 207 aa9.42□□□□□ -0.9
GFAP-228ENST00000638488 MRPL23Q16540 153 aaKnown RBP9.42□□□□□ -0.9
GFAP-228ENST00000638488 MRPL20Q9BYC9 149 aaKnown RBP9.42□□□□□ -0.9
GFAP-228ENST00000638488 H3BVH4 76 aa9.42□□□□□ -0.9
GFAP-228ENST00000638488 PLGLAQ15195 96 aa9.42□□□□□ -0.9
GFAP-228ENST00000638488 LINC01600Q96MT4 127 aa9.42□□□□□ -0.9
GFAP-228ENST00000638488 C8orf49Q96NF6 230 aa9.42□□□□□ -0.9
GFAP-228ENST00000638488 TMSB15BA0A087X1C1 80 aa9.41□□□□□ -0.9
GFAP-228ENST00000638488 B9A039 149 aa9.41□□□□□ -0.9
GFAP-228ENST00000638488 SLC25A20O43772 301 aa9.41□□□□□ -0.9
GFAP-228ENST00000638488 NDUFA3O95167 84 aa9.41□□□□□ -0.9
GFAP-228ENST00000638488 LRBAP50851 2863 aa9.41□□□□□ -0.9
GFAP-228ENST00000638488 SRSF2Q01130 221 aaKnown RBP9.41□□□□□ -0.9
GFAP-228ENST00000638488 LY6DQ14210 128 aa9.41□□□□□ -0.9
GFAP-228ENST00000638488 ARFGEF3Q5TH69 2177 aa9.41□□□□□ -0.9
GFAP-228ENST00000638488 NDUFA11Q86Y39 141 aa9.41□□□□□ -0.9
GFAP-228ENST00000638488 NAV3Q8IVL0 2385 aa9.41□□□□□ -0.9
GFAP-228ENST00000638488 SPTBN4Q9H254 2564 aa9.41□□□□□ -0.9
GFAP-228ENST00000638488 AAMDCQ9H7C9 122 aa9.41□□□□□ -0.9
GFAP-228ENST00000638488 TPRP12270 2363 aaKnown RBP9.41□□□□□ -0.9
GFAP-228ENST00000638488 C10orf55Q5SWW7 151 aa9.4□□□□□ -0.9
GFAP-228ENST00000638488 CSDC2Q9Y534 153 aaKnown RBP9.4□□□□□ -0.9
GFAP-228ENST00000638488 SCGB2A1O75556 95 aa9.4□□□□□ -0.9
GFAP-228ENST00000638488 PF4V1P10720 104 aa9.4□□□□□ -0.9
GFAP-228ENST00000638488 LYZP61626 148 aa9.4□□□□□ -0.9
GFAP-228ENST00000638488 LAGE3Q14657 143 aa9.4□□□□□ -0.9
GFAP-228ENST00000638488 CDSNQ15517 529 aa9.4□□□□□ -0.9
GFAP-228ENST00000638488 RUSC1-AS1Q66K80 236 aa9.4□□□□□ -0.9
GFAP-228ENST00000638488 DNAJC30Q96LL9 226 aa9.4□□□□□ -0.9
GFAP-228ENST00000638488 COL6A6A6NMZ7 2263 aa9.39□□□□□ -0.91
GFAP-228ENST00000638488 ASCL2Q99929 193 aa9.39□□□□□ -0.91
GFAP-228ENST00000638488 LY6HO94772 140 aa9.39□□□□□ -0.91
GFAP-228ENST00000638488 SRSF9Q13242 221 aaKnown RBP eCLIP9.39□□□□□ -0.91
GFAP-228ENST00000638488 SFTA2Q6UW10 78 aa9.39□□□□□ -0.91
GFAP-228ENST00000638488 C10orf126Q8N4M7 172 aa9.39□□□□□ -0.91
GFAP-228ENST00000638488 ODF3Q96PU9 254 aa9.39□□□□□ -0.91
GFAP-228ENST00000638488 IGHV3-72A0A0B4J1Y9 119 aa9.38□□□□□ -0.91
GFAP-228ENST00000638488 LOXP28300 417 aaPredicted RBP9.38□□□□□ -0.91
GFAP-228ENST00000638488 RPL13AP40429 203 aaKnown RBP9.38□□□□□ -0.91
GFAP-228ENST00000638488 LINC01587Q99440 93 aa9.38□□□□□ -0.91
GFAP-228ENST00000638488 SHANK2-AS3Q9BTD1 123 aa9.38□□□□□ -0.91
GFAP-228ENST00000638488 ZNF815PA8K554 130 aa9.38□□□□□ -0.91
GFAP-228ENST00000638488 ATP5J2P56134 94 aa9.38□□□□□ -0.91
GFAP-228ENST00000638488 Q6ZQT7 251 aa9.38□□□□□ -0.91
GFAP-228ENST00000638488 C15orf53Q8NAA6 179 aa9.38□□□□□ -0.91
GFAP-228ENST00000638488 ABCA4P78363 2273 aa9.38□□□□□ -0.91
GFAP-228ENST00000638488 TRAV8-4A0A0B4J246 113 aa9.37□□□□□ -0.91
GFAP-228ENST00000638488 ENSAO43768 121 aaKnown RBP9.37□□□□□ -0.91
GFAP-228ENST00000638488 GAS8-AS1O95177 125 aa9.37□□□□□ -0.91
GFAP-228ENST00000638488 EGR2P11161 476 aaPredicted RBP9.37□□□□□ -0.91
GFAP-228ENST00000638488 PDE6HQ13956 83 aa9.37□□□□□ -0.91
GFAP-228ENST00000638488 SCGB1D4Q6XE38 83 aa9.37□□□□□ -0.91
GFAP-228ENST00000638488 H3BRN7 92 aa9.37□□□□□ -0.91
GFAP-228ENST00000638488 HLA-DMBP28068 263 aa9.37□□□□□ -0.91
GFAP-228ENST00000638488 KLRB1Q12918 225 aa9.37□□□□□ -0.91
GFAP-228ENST00000638488 PRADC1Q9BSG0 188 aa9.37□□□□□ -0.91
GFAP-228ENST00000638488 C9JAW5 83 aa9.36□□□□□ -0.91
GFAP-228ENST00000638488 WIPF1O43516 503 aa9.36□□□□□ -0.91
GFAP-228ENST00000638488 IGLV2-23P01705 113 aa9.36□□□□□ -0.91
GFAP-228ENST00000638488 COX6B1P14854 86 aa9.36□□□□□ -0.91
GFAP-228ENST00000638488 Q8N1Y9 231 aa9.36□□□□□ -0.91
GFAP-228ENST00000638488 UCNP55089 124 aa9.36□□□□□ -0.91
GFAP-228ENST00000638488 VMA21Q3ZAQ7 101 aa9.36□□□□□ -0.91
GFAP-228ENST00000638488 C17orf77Q96MU5 243 aa9.36□□□□□ -0.91
GFAP-228ENST00000638488 PRR25Q96S07 402 aa9.36□□□□□ -0.91
GFAP-228ENST00000638488 ONECUT1Q9UBC0 465 aa9.36□□□□□ -0.91
GFAP-228ENST00000638488 MSRB1Q9NZV6 116 aa9.35□□□□□ -0.91
GFAP-228ENST00000638488 DCHS2Q6V1P9 2916 aa9.35□□□□□ -0.91
GFAP-228ENST00000638488 MRPS12O15235 138 aaKnown RBP9.35□□□□□ -0.91
GFAP-228ENST00000638488 DUSP14O95147 198 aaKnown RBP9.35□□□□□ -0.91
GFAP-228ENST00000638488 APELAP0DMC3 54 aa9.35□□□□□ -0.91
GFAP-228ENST00000638488 IGHV1-8P0DP01 117 aa9.35□□□□□ -0.91
GFAP-228ENST00000638488 ADORA2A-AS1P86434 159 aa9.35□□□□□ -0.91
GFAP-228ENST00000638488 HCP5Q6MZN7 132 aa9.35□□□□□ -0.91
GFAP-228ENST00000638488 PRO1854Q9UHT4 67 aa9.35□□□□□ -0.91
GFAP-228ENST00000638488 TACC2O95359 2948 aa9.35□□□□□ -0.91
GFAP-228ENST00000638488 CHD8Q9HCK8 2581 aa9.35□□□□□ -0.91
GFAP-228ENST00000638488 ANKHD1Q8IWZ3 2542 aaKnown RBP9.35□□□□□ -0.91
GFAP-228ENST00000638488 M0R3E3 92 aa9.35□□□□□ -0.91
GFAP-228ENST00000638488 CFC1BP0CG36 223 aa9.35□□□□□ -0.91
GFAP-228ENST00000638488 CFC1P0CG37 223 aa9.35□□□□□ -0.91
GFAP-228ENST00000638488 SLC25A16P16260 332 aa9.35□□□□□ -0.91
GFAP-228ENST00000638488 DTX2Q86UW9 622 aa9.35□□□□□ -0.91
GFAP-228ENST00000638488 NTN5Q8WTR8 489 aaPredicted RBP9.35□□□□□ -0.91
GFAP-228ENST00000638488 PLEKHB2Q96CS7 222 aa9.35□□□□□ -0.91
GFAP-228ENST00000638488 PSMG3-AS1Q96PY0 264 aa9.35□□□□□ -0.91
GFAP-228ENST00000638488 SPANXDQ9BXN6 97 aa9.35□□□□□ -0.91
GFAP-228ENST00000638488 TPSG1Q9NRR2 321 aa9.35□□□□□ -0.91
GFAP-228ENST00000638488 TRAV2A0A0B4J234 112 aa9.34□□□□□ -0.91
GFAP-228ENST00000638488 P0DMU3 169 aa9.34□□□□□ -0.91
GFAP-228ENST00000638488 FAM231AP0DMU4 169 aa9.34□□□□□ -0.91
GFAP-228ENST00000638488 FAM231CP0DMU5 169 aa9.34□□□□□ -0.91
GFAP-228ENST00000638488 GATA1P15976 413 aaPredicted RBP9.34□□□□□ -0.91
GFAP-228ENST00000638488 COX7A1P24310 79 aa9.34□□□□□ -0.91
GFAP-228ENST00000638488 TMEM155Q4W5P6 130 aa9.34□□□□□ -0.91
GFAP-228ENST00000638488 IL17RELQ6ZVW7 336 aa9.34□□□□□ -0.91
GFAP-228ENST00000638488 NRACQ8N912 160 aa9.34□□□□□ -0.91
GFAP-228ENST00000638488 NEXN-AS1Q8NBZ9 246 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms