RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 Q8N2B8 174 aa5.67□□□□□ -1.5
SCARB2-209ENST00000638409 OR2T10Q8NGZ9 312 aa5.67□□□□□ -1.5
SCARB2-209ENST00000638409 BTF3L4Q96K17 158 aa5.67□□□□□ -1.5
SCARB2-209ENST00000638409 LINC01587Q99440 93 aa5.67□□□□□ -1.5
SCARB2-209ENST00000638409 RNF5Q99942 180 aa5.67□□□□□ -1.5
SCARB2-209ENST00000638409 PSMG3Q9BT73 122 aaPredicted RBP5.67□□□□□ -1.5
SCARB2-209ENST00000638409 MRPL20Q9BYC9 149 aaKnown RBP5.67□□□□□ -1.5
SCARB2-209ENST00000638409 WDR61Q9GZS3 305 aaKnown RBP5.67□□□□□ -1.5
SCARB2-209ENST00000638409 OR2D2Q9H210 308 aa5.67□□□□□ -1.5
SCARB2-209ENST00000638409 KBTBD11O94819 623 aa5.67□□□□□ -1.5
SCARB2-209ENST00000638409 MEF2BQ02080 365 aaPredicted RBP5.67□□□□□ -1.5
SCARB2-209ENST00000638409 CYP2G1PQ6ZSU1 146 aa5.67□□□□□ -1.5
SCARB2-209ENST00000638409 RPP25LQ8N5L8 163 aaKnown RBP5.67□□□□□ -1.5
SCARB2-209ENST00000638409 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.67□□□□□ -1.5
SCARB2-209ENST00000638409 SLC39A9Q9NUM3 307 aa5.67□□□□□ -1.5
SCARB2-209ENST00000638409 H0YJW9 148 aa5.66□□□□□ -1.5
SCARB2-209ENST00000638409 S100GP29377 79 aa5.66□□□□□ -1.5
SCARB2-209ENST00000638409 THBS3P49746 956 aa5.66□□□□□ -1.5
SCARB2-209ENST00000638409 LY6EQ16553 131 aa5.66□□□□□ -1.5
SCARB2-209ENST00000638409 TNFRSF19Q9NS68 423 aa5.66□□□□□ -1.5
SCARB2-209ENST00000638409 TRAV8-2A0A0B4J237 113 aa5.66□□□□□ -1.5
SCARB2-209ENST00000638409 PPP5D1E7EU14 171 aa5.66□□□□□ -1.5
SCARB2-209ENST00000638409 HRASP01112 189 aa5.66□□□□□ -1.5
SCARB2-209ENST00000638409 C6orf99Q4VX62 202 aa5.66□□□□□ -1.5
SCARB2-209ENST00000638409 ZNF585BQ52M93 769 aa5.66□□□□□ -1.5
SCARB2-209ENST00000638409 NPBQ8NG41 125 aa5.66□□□□□ -1.5
SCARB2-209ENST00000638409 HSD17B10Q99714 261 aaKnown RBP5.66□□□□□ -1.5
SCARB2-209ENST00000638409 PYGO2Q9BRQ0 406 aa5.66□□□□□ -1.5
SCARB2-209ENST00000638409 C19orf24Q9BVV8 132 aa5.66□□□□□ -1.5
SCARB2-209ENST00000638409 MOB4Q9Y3A3 225 aa5.66□□□□□ -1.5
SCARB2-209ENST00000638409 RBM7Q9Y580 266 aaKnown RBP5.66□□□□□ -1.5
SCARB2-209ENST00000638409 M0R1X1 148 aa5.65□□□□□ -1.5
SCARB2-209ENST00000638409 CD24P25063 80 aa5.65□□□□□ -1.5
SCARB2-209ENST00000638409 SPINK9Q5DT21 86 aa5.65□□□□□ -1.5
SCARB2-209ENST00000638409 CLEC19AQ6UXS0 136 aa5.65□□□□□ -1.5
SCARB2-209ENST00000638409 PDPNQ86YL7 162 aa5.65□□□□□ -1.5
SCARB2-209ENST00000638409 ORAOV1Q8WV07 137 aa5.65□□□□□ -1.5
SCARB2-209ENST00000638409 WASHC3Q9Y3C0 194 aa5.65□□□□□ -1.5
SCARB2-209ENST00000638409 SLC25A6P12236 298 aa5.65□□□□□ -1.51
SCARB2-209ENST00000638409 PSMB3P49720 205 aa5.65□□□□□ -1.51
SCARB2-209ENST00000638409 SERF2P84101 59 aa5.65□□□□□ -1.51
SCARB2-209ENST00000638409 ACOT6Q3I5F7 207 aaPredicted RBP5.65□□□□□ -1.51
SCARB2-209ENST00000638409 C5orf56Q8N8D9 126 aa5.65□□□□□ -1.51
SCARB2-209ENST00000638409 VN1R17PQ8TDU5 208 aa5.65□□□□□ -1.51
SCARB2-209ENST00000638409 SLC35E1Q96K37 410 aa5.65□□□□□ -1.51
SCARB2-209ENST00000638409 MIEN1Q9BRT3 115 aa5.65□□□□□ -1.51
SCARB2-209ENST00000638409 GNB1LQ9BYB4 327 aa5.65□□□□□ -1.51
SCARB2-209ENST00000638409 RNASE7Q9H1E1 156 aaKnown RBP5.65□□□□□ -1.51
SCARB2-209ENST00000638409 C2CD3Q4AC94 2353 aa5.65□□□□□ -1.51
SCARB2-209ENST00000638409 JMJD1CQ15652 2540 aa5.64□□□□□ -1.51
SCARB2-209ENST00000638409 IGHV3-72A0A0B4J1Y9 119 aa5.64□□□□□ -1.51
SCARB2-209ENST00000638409 FAM236DA0A1B0GTK5 79 aa5.64□□□□□ -1.51
SCARB2-209ENST00000638409 NDUFA3O95167 84 aa5.64□□□□□ -1.51
SCARB2-209ENST00000638409 APOA2P02652 100 aa5.64□□□□□ -1.51
SCARB2-209ENST00000638409 FAM236CP0DP71 79 aa5.64□□□□□ -1.51
SCARB2-209ENST00000638409 HES1Q14469 280 aa5.64□□□□□ -1.51
SCARB2-209ENST00000638409 FAM78BQ5VT40 261 aa5.64□□□□□ -1.51
SCARB2-209ENST00000638409 LSM10Q969L4 123 aaKnown RBP5.64□□□□□ -1.51
SCARB2-209ENST00000638409 ZNF702PQ9H963 129 aa5.64□□□□□ -1.51
SCARB2-209ENST00000638409 FKBP11Q9NYL4 201 aa5.64□□□□□ -1.51
SCARB2-209ENST00000638409 NPPCP23582 126 aa5.64□□□□□ -1.51
SCARB2-209ENST00000638409 G6PCP35575 357 aa5.64□□□□□ -1.51
SCARB2-209ENST00000638409 COA6Q5JTJ3 125 aaKnown RBP5.64□□□□□ -1.51
SCARB2-209ENST00000638409 PRNTQ86SH4 94 aa5.64□□□□□ -1.51
SCARB2-209ENST00000638409 TMEM256Q8N2U0 113 aa5.64□□□□□ -1.51
SCARB2-209ENST00000638409 TCTEX1D1Q8N7M0 179 aa5.64□□□□□ -1.51
SCARB2-209ENST00000638409 NKAPP1Q8N9T2 125 aa5.64□□□□□ -1.51
SCARB2-209ENST00000638409 Q8N9W7 124 aa5.64□□□□□ -1.51
SCARB2-209ENST00000638409 LINC01006Q8NI28 216 aa5.64□□□□□ -1.51
SCARB2-209ENST00000638409 IGHV3OR16-9A0A0B4J2B5 98 aa5.63□□□□□ -1.51
SCARB2-209ENST00000638409 CTXND1A0A1B0GTU2 59 aa5.63□□□□□ -1.51
SCARB2-209ENST00000638409 CLPSL1A2RUU4 121 aa5.63□□□□□ -1.51
SCARB2-209ENST00000638409 RBFOX2O43251 390 aaKnown RBP eCLIP5.63□□□□□ -1.51
SCARB2-209ENST00000638409 NUPR1O60356 82 aa5.63□□□□□ -1.51
SCARB2-209ENST00000638409 ZNF253O75346 499 aa5.63□□□□□ -1.51
SCARB2-209ENST00000638409 TRBV12-3P01733 135 aa5.63□□□□□ -1.51
SCARB2-209ENST00000638409 LINC00205P59089 165 aa5.63□□□□□ -1.51
SCARB2-209ENST00000638409 RPL30P62888 115 aaKnown RBP5.63□□□□□ -1.51
SCARB2-209ENST00000638409 BLCAPP62952 87 aa5.63□□□□□ -1.51
SCARB2-209ENST00000638409 RTL8BQ17RB0 113 aa5.63□□□□□ -1.51
SCARB2-209ENST00000638409 TMEM14EPQ6UXP3 125 aa5.63□□□□□ -1.51
SCARB2-209ENST00000638409 LINC01551Q86U37 167 aa5.63□□□□□ -1.51
SCARB2-209ENST00000638409 ACY3Q96HD9 319 aa5.63□□□□□ -1.51
SCARB2-209ENST00000638409 DERL1Q9BUN8 251 aa5.63□□□□□ -1.51
SCARB2-209ENST00000638409 ZNF580Q9UK33 172 aa5.63□□□□□ -1.51
SCARB2-209ENST00000638409 KRASP01116 189 aa5.63□□□□□ -1.51
SCARB2-209ENST00000638409 IGKV1-16P04430 117 aa5.63□□□□□ -1.51
SCARB2-209ENST00000638409 ATP5G1P05496 136 aa5.63□□□□□ -1.51
SCARB2-209ENST00000638409 OR10J1P30954 320 aa5.63□□□□□ -1.51
SCARB2-209ENST00000638409 LINC00337Q8N6G1 96 aa5.63□□□□□ -1.51
SCARB2-209ENST00000638409 ZNF705FA8MVS1 300 aaPredicted RBP5.62□□□□□ -1.51
SCARB2-209ENST00000638409 TMEM250H0YL14 139 aa5.62□□□□□ -1.51
SCARB2-209ENST00000638409 IGLV2-23P01705 113 aa5.62□□□□□ -1.51
SCARB2-209ENST00000638409 IGHG2P01859 326 aa5.62□□□□□ -1.51
SCARB2-209ENST00000638409 ZNF705DP0CH99 300 aaPredicted RBP5.62□□□□□ -1.51
SCARB2-209ENST00000638409 ZNF705BP0CI00 300 aaPredicted RBP5.62□□□□□ -1.51
SCARB2-209ENST00000638409 ATP5G3P48201 142 aa5.62□□□□□ -1.51
SCARB2-209ENST00000638409 TMEM147Q9BVK8 224 aa5.62□□□□□ -1.51
SCARB2-209ENST00000638409 TIMM9Q9Y5J7 89 aa5.62□□□□□ -1.51
SCARB2-209ENST00000638409 ATRQ13535 2644 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms