RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 IGLC3P0DOY3 106 aa11.25□□□□□ -0.61
SCARB2-208ENST00000638372 GP9P14770 177 aa11.25□□□□□ -0.61
SCARB2-208ENST00000638372 DEFB136Q30KP8 78 aa11.25□□□□□ -0.61
SCARB2-208ENST00000638372 ERG28Q9UKR5 140 aa11.25□□□□□ -0.61
SCARB2-208ENST00000638372 TMEM238C9JI98 176 aa11.25□□□□□ -0.61
SCARB2-208ENST00000638372 KIR3DS1Q14943 382 aa11.25□□□□□ -0.61
SCARB2-208ENST00000638372 TRAV8-2A0A0B4J237 113 aa11.24□□□□□ -0.61
SCARB2-208ENST00000638372 Q8N7P7 452 aa11.24□□□□□ -0.61
SCARB2-208ENST00000638372 FAM167A-AS1Q96KT0 104 aa11.24□□□□□ -0.61
SCARB2-208ENST00000638372 IGLV11-55A0A075B6I3 123 aa11.24□□□□□ -0.61
SCARB2-208ENST00000638372 J3QLI3 93 aa11.24□□□□□ -0.61
SCARB2-208ENST00000638372 BRWD1-AS2P59051 145 aa11.24□□□□□ -0.61
SCARB2-208ENST00000638372 Q8N9W7 124 aa11.24□□□□□ -0.61
SCARB2-208ENST00000638372 ZNF625Q96I27 306 aaPredicted RBP11.24□□□□□ -0.61
SCARB2-208ENST00000638372 DSCAML1Q8TD84 2053 aa11.24□□□□□ -0.61
SCARB2-208ENST00000638372 Q8N8P6 123 aa11.24□□□□□ -0.61
SCARB2-208ENST00000638372 MORN3Q6PF18 240 aaPredicted RBP11.23□□□□□ -0.61
SCARB2-208ENST00000638372 TRPT1Q86TN4 253 aaKnown RBP11.23□□□□□ -0.61
SCARB2-208ENST00000638372 PLEKHB2Q96CS7 222 aa11.23□□□□□ -0.61
SCARB2-208ENST00000638372 CHAC1Q9BUX1 264 aa11.23□□□□□ -0.61
SCARB2-208ENST00000638372 J3QKU1 62 aa11.23□□□□□ -0.61
SCARB2-208ENST00000638372 IGLV2-23P01705 113 aa11.23□□□□□ -0.61
SCARB2-208ENST00000638372 ESDP10768 282 aa11.23□□□□□ -0.61
SCARB2-208ENST00000638372 RNF114Q9Y508 228 aa11.23□□□□□ -0.61
SCARB2-208ENST00000638372 GAGE12JA6NER3 117 aa11.23□□□□□ -0.61
SCARB2-208ENST00000638372 GAGE1Q13065 139 aa11.23□□□□□ -0.61
SCARB2-208ENST00000638372 GAGE4Q13068 117 aa11.23□□□□□ -0.61
SCARB2-208ENST00000638372 GAGE5Q13069 117 aa11.23□□□□□ -0.61
SCARB2-208ENST00000638372 GAGE13Q4V321 117 aa11.23□□□□□ -0.61
SCARB2-208ENST00000638372 PYGO2Q9BRQ0 406 aa11.23□□□□□ -0.61
SCARB2-208ENST00000638372 GNRH2O43555 120 aa11.22□□□□□ -0.61
SCARB2-208ENST00000638372 ELANEP08246 267 aa11.22□□□□□ -0.61
SCARB2-208ENST00000638372 LY6G5BQ8NDX9 201 aa11.22□□□□□ -0.61
SCARB2-208ENST00000638372 NPBQ8NG41 125 aa11.22□□□□□ -0.61
SCARB2-208ENST00000638372 IGHV3-38A0A0C4DH36 116 aa11.22□□□□□ -0.61
SCARB2-208ENST00000638372 CRPP02741 224 aa11.22□□□□□ -0.61
SCARB2-208ENST00000638372 FASNP49327 2511 aaKnown RBP11.22□□□□□ -0.61
SCARB2-208ENST00000638372 M0R2P5 195 aa11.22□□□□□ -0.61
SCARB2-208ENST00000638372 ZNF124Q15973 351 aa11.22□□□□□ -0.61
SCARB2-208ENST00000638372 C11orf1Q9H5F2 150 aa11.22□□□□□ -0.61
SCARB2-208ENST00000638372 RBMY1BA6NDE4 496 aaKnown RBP11.21□□□□□ -0.61
SCARB2-208ENST00000638372 RBMY1EA6NEQ0 496 aaKnown RBP11.21□□□□□ -0.61
SCARB2-208ENST00000638372 TEX22C9J3V5 150 aa11.21□□□□□ -0.61
SCARB2-208ENST00000638372 RBMY1DP0C7P1 496 aaKnown RBP11.21□□□□□ -0.61
SCARB2-208ENST00000638372 RBMY1A1P0DJD3 496 aaKnown RBP11.21□□□□□ -0.61
SCARB2-208ENST00000638372 RBMY1CP0DJD4 496 aa11.21□□□□□ -0.61
SCARB2-208ENST00000638372 NUPR1O60356 82 aa11.21□□□□□ -0.61
SCARB2-208ENST00000638372 MRPL35Q9NZE8 188 aaKnown RBP11.21□□□□□ -0.61
SCARB2-208ENST00000638372 VPREB3Q9UKI3 123 aa11.21□□□□□ -0.61
SCARB2-208ENST00000638372 PKD1L2Q7Z442 2459 aa11.21□□□□□ -0.61
SCARB2-208ENST00000638372 CGB3P0DN86 165 aa11.21□□□□□ -0.61
SCARB2-208ENST00000638372 CGB7P0DN87 165 aa11.21□□□□□ -0.61
SCARB2-208ENST00000638372 MAJINQ3KP22 176 aa11.21□□□□□ -0.61
SCARB2-208ENST00000638372 TIMM21Q9BVV7 248 aa11.21□□□□□ -0.61
SCARB2-208ENST00000638372 SMIM2Q9BVW6 85 aa11.21□□□□□ -0.61
SCARB2-208ENST00000638372 C10orf142B7Z368 130 aa11.21□□□□□ -0.62
SCARB2-208ENST00000638372 TSPAN13O95857 204 aa11.21□□□□□ -0.62
SCARB2-208ENST00000638372 GATA1P15976 413 aaPredicted RBP11.21□□□□□ -0.62
SCARB2-208ENST00000638372 HOXD3P31249 432 aaPredicted RBP11.21□□□□□ -0.62
SCARB2-208ENST00000638372 CFHR4Q92496 578 aa11.21□□□□□ -0.62
SCARB2-208ENST00000638372 CEP192Q8TEP8 1941 aa11.21□□□□□ -0.62
SCARB2-208ENST00000638372 MTORP42345 2549 aa11.2□□□□□ -0.62
SCARB2-208ENST00000638372 PAX4O43316 350 aa11.2□□□□□ -0.62
SCARB2-208ENST00000638372 CKS1BP61024 79 aa11.2□□□□□ -0.62
SCARB2-208ENST00000638372 PRIMA1Q86XR5 153 aa11.2□□□□□ -0.62
SCARB2-208ENST00000638372 MSRB1Q9NZV6 116 aa11.2□□□□□ -0.62
SCARB2-208ENST00000638372 C6orf226Q5I0X4 101 aa11.2□□□□□ -0.62
SCARB2-208ENST00000638372 AJUBAQ96IF1 538 aa11.2□□□□□ -0.62
SCARB2-208ENST00000638372 PGPEP1Q9NXJ5 209 aa11.2□□□□□ -0.62
SCARB2-208ENST00000638372 A8MWV9 139 aa11.2□□□□□ -0.62
SCARB2-208ENST00000638372 GAGE12BA1L429 117 aa11.19□□□□□ -0.62
SCARB2-208ENST00000638372 RHODO00212 210 aa11.19□□□□□ -0.62
SCARB2-208ENST00000638372 GAGE7O76087 117 aa11.19□□□□□ -0.62
SCARB2-208ENST00000638372 GAGE12FP0CL80 117 aa11.19□□□□□ -0.62
SCARB2-208ENST00000638372 GAGE12GP0CL81 117 aa11.19□□□□□ -0.62
SCARB2-208ENST00000638372 GAGE12IP0CL82 117 aa11.19□□□□□ -0.62
SCARB2-208ENST00000638372 TMEM86BQ8N661 226 aa11.19□□□□□ -0.62
SCARB2-208ENST00000638372 C10orf105Q8TEF2 133 aa11.19□□□□□ -0.62
SCARB2-208ENST00000638372 ZNF462Q96JM2 2506 aa11.19□□□□□ -0.62
SCARB2-208ENST00000638372 BUB3O43684 328 aa11.19□□□□□ -0.62
SCARB2-208ENST00000638372 FRMD6-AS1P0C7T7 363 aa11.19□□□□□ -0.62
SCARB2-208ENST00000638372 DEFB121Q5J5C9 76 aa11.19□□□□□ -0.62
SCARB2-208ENST00000638372 P0C879 139 aa11.19□□□□□ -0.62
SCARB2-208ENST00000638372 CD5LO43866 347 aa11.19□□□□□ -0.62
SCARB2-208ENST00000638372 FBXL19-AS1Q494R0 122 aa11.19□□□□□ -0.62
SCARB2-208ENST00000638372 ZNRF2Q8NHG8 242 aa11.19□□□□□ -0.62
SCARB2-208ENST00000638372 C1orf229Q6ZS94 237 aaPredicted RBP11.18□□□□□ -0.62
SCARB2-208ENST00000638372 UBE2V1Q13404 147 aa11.18□□□□□ -0.62
SCARB2-208ENST00000638372 RASL10AQ92737 203 aa11.18□□□□□ -0.62
SCARB2-208ENST00000638372 MUC22E2RYF6 1773 aaPredicted RBP11.18□□□□□ -0.62
SCARB2-208ENST00000638372 AZU1P20160 251 aa11.18□□□□□ -0.62
SCARB2-208ENST00000638372 ZNF295-AS1Q8N0V1 137 aa11.18□□□□□ -0.62
SCARB2-208ENST00000638372 C3orf56Q8N813 242 aa11.18□□□□□ -0.62
SCARB2-208ENST00000638372 DKK2Q9UBU2 259 aa11.17□□□□□ -0.62
SCARB2-208ENST00000638372 PRAC2D3DTV9 90 aa11.17□□□□□ -0.62
SCARB2-208ENST00000638372 PRRC2AP48634 2157 aaKnown RBP11.17□□□□□ -0.62
SCARB2-208ENST00000638372 KIAA1549Q9HCM3 1950 aa11.17□□□□□ -0.62
SCARB2-208ENST00000638372 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.17□□□□□ -0.62
SCARB2-208ENST00000638372 DEFB1P60022 68 aa11.17□□□□□ -0.62
SCARB2-208ENST00000638372 PMVKQ15126 192 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms