RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 ASCL2Q99929 193 aa9.29□□□□□ -0.92
CAPN3-221ENST00000638141 MSRB1Q9NZV6 116 aa9.29□□□□□ -0.92
CAPN3-221ENST00000638141 J3KT08 172 aa9.29□□□□□ -0.92
CAPN3-221ENST00000638141 ORMDL2Q53FV1 153 aa9.29□□□□□ -0.92
CAPN3-221ENST00000638141 TOMM6Q96B49 74 aa9.29□□□□□ -0.92
CAPN3-221ENST00000638141 TRBV10-2A0A0K0K1G8 114 aa9.28□□□□□ -0.92
CAPN3-221ENST00000638141 M0R3E3 92 aa9.28□□□□□ -0.92
CAPN3-221ENST00000638141 CRYGBP07316 175 aa9.28□□□□□ -0.92
CAPN3-221ENST00000638141 ATXN8Q156A1 80 aa9.28□□□□□ -0.92
CAPN3-221ENST00000638141 DEFB121Q5J5C9 76 aa9.28□□□□□ -0.92
CAPN3-221ENST00000638141 HCP5Q6MZN7 132 aa9.28□□□□□ -0.92
CAPN3-221ENST00000638141 SLC25A29Q8N8R3 303 aa9.28□□□□□ -0.92
CAPN3-221ENST00000638141 A0A0B4J2C4 111 aa9.28□□□□□ -0.92
CAPN3-221ENST00000638141 I3L2K1 104 aa9.28□□□□□ -0.92
CAPN3-221ENST00000638141 GATA1P15976 413 aaPredicted RBP9.28□□□□□ -0.92
CAPN3-221ENST00000638141 LINC01620Q4KN68 170 aa9.28□□□□□ -0.92
CAPN3-221ENST00000638141 PAPPA-AS1Q5QFB9 102 aa9.28□□□□□ -0.92
CAPN3-221ENST00000638141 RAI1Q7Z5J4 1906 aaPredicted RBP9.27□□□□□ -0.92
CAPN3-221ENST00000638141 IGLV3-9A0A075B6K5 115 aa9.27□□□□□ -0.93
CAPN3-221ENST00000638141 H3BMM0 161 aa9.27□□□□□ -0.93
CAPN3-221ENST00000638141 NDUFA7O95182 113 aa9.27□□□□□ -0.93
CAPN3-221ENST00000638141 ATP5G1P05496 136 aa9.27□□□□□ -0.93
CAPN3-221ENST00000638141 EFNA4P52798 201 aa9.27□□□□□ -0.93
CAPN3-221ENST00000638141 ERCC8Q13216 396 aa9.27□□□□□ -0.93
CAPN3-221ENST00000638141 UBE2WQ96B02 151 aa9.27□□□□□ -0.93
CAPN3-221ENST00000638141 INTS1Q8N201 2190 aaKnown RBP9.27□□□□□ -0.93
CAPN3-221ENST00000638141 A0A1W2PNU3 283 aaPredicted RBP9.27□□□□□ -0.93
CAPN3-221ENST00000638141 IGKV1-17P01599 117 aa9.27□□□□□ -0.93
CAPN3-221ENST00000638141 IGHV3-33P01772 117 aa9.27□□□□□ -0.93
CAPN3-221ENST00000638141 LINC00694P0DN24 101 aa9.27□□□□□ -0.93
CAPN3-221ENST00000638141 EBI3Q14213 229 aa9.27□□□□□ -0.93
CAPN3-221ENST00000638141 DNAJC13O75165 2243 aa9.27□□□□□ -0.93
CAPN3-221ENST00000638141 CHD8Q9HCK8 2581 aa9.26□□□□□ -0.93
CAPN3-221ENST00000638141 GLRXP35754 106 aa9.26□□□□□ -0.93
CAPN3-221ENST00000638141 ZNF80P51504 273 aaPredicted RBP9.26□□□□□ -0.93
CAPN3-221ENST00000638141 CRIP2P52943 208 aaPredicted RBP9.26□□□□□ -0.93
CAPN3-221ENST00000638141 HERVK_113P61574 105 aa9.26□□□□□ -0.93
CAPN3-221ENST00000638141 C3orf22Q8N5N4 141 aa9.26□□□□□ -0.93
CAPN3-221ENST00000638141 TMEM101Q96IK0 257 aa9.26□□□□□ -0.93
CAPN3-221ENST00000638141 SCGB3A1Q96QR1 104 aa9.26□□□□□ -0.93
CAPN3-221ENST00000638141 CCL13Q99616 98 aa9.26□□□□□ -0.93
CAPN3-221ENST00000638141 VKORC1Q9BQB6 163 aa9.26□□□□□ -0.93
CAPN3-221ENST00000638141 SMIM2Q9BVW6 85 aa9.26□□□□□ -0.93
CAPN3-221ENST00000638141 ZNRD1Q9P1U0 126 aa9.26□□□□□ -0.93
CAPN3-221ENST00000638141 IGHV4-4A0A075B6R2 117 aa9.26□□□□□ -0.93
CAPN3-221ENST00000638141 UQCRQO14949 82 aa9.26□□□□□ -0.93
CAPN3-221ENST00000638141 FAM216BQ8N7L0 139 aa9.26□□□□□ -0.93
CAPN3-221ENST00000638141 RNF125Q96EQ8 232 aa9.26□□□□□ -0.93
CAPN3-221ENST00000638141 DEFB127Q9H1M4 99 aa9.26□□□□□ -0.93
CAPN3-221ENST00000638141 TEX22C9J3V5 150 aa9.25□□□□□ -0.93
CAPN3-221ENST00000638141 H3BT86 120 aa9.25□□□□□ -0.93
CAPN3-221ENST00000638141 DUX4L9Q6RFH8 374 aaPredicted RBP9.25□□□□□ -0.93
CAPN3-221ENST00000638141 TPSG1Q9NRR2 321 aa9.25□□□□□ -0.93
CAPN3-221ENST00000638141 AHCTF1Q8WYP5 2266 aa9.25□□□□□ -0.93
CAPN3-221ENST00000638141 SVILO95425 2214 aa9.25□□□□□ -0.93
CAPN3-221ENST00000638141 NPFFO15130 113 aa9.24□□□□□ -0.93
CAPN3-221ENST00000638141 ZNF474Q6S9Z5 364 aaPredicted RBP9.24□□□□□ -0.93
CAPN3-221ENST00000638141 POM121L12Q8N7R1 296 aa9.24□□□□□ -0.93
CAPN3-221ENST00000638141 ZNF491Q8N8L2 437 aa9.24□□□□□ -0.93
CAPN3-221ENST00000638141 LINC00526Q96FQ7 95 aa9.24□□□□□ -0.93
CAPN3-221ENST00000638141 CHCHD5Q9BSY4 110 aa9.24□□□□□ -0.93
CAPN3-221ENST00000638141 LOC400499M0QZD8 3231 aa9.24□□□□□ -0.93
CAPN3-221ENST00000638141 MSMPQ1L6U9 139 aa9.24□□□□□ -0.93
CAPN3-221ENST00000638141 TMEM155Q4W5P6 130 aa9.24□□□□□ -0.93
CAPN3-221ENST00000638141 TMEM170BQ5T4T1 132 aa9.24□□□□□ -0.93
CAPN3-221ENST00000638141 TRPT1Q86TN4 253 aaKnown RBP9.24□□□□□ -0.93
CAPN3-221ENST00000638141 TMEM263Q8WUH6 116 aaKnown RBP9.24□□□□□ -0.93
CAPN3-221ENST00000638141 SLC25A15Q9Y619 301 aa9.24□□□□□ -0.93
CAPN3-221ENST00000638141 TEX49A0A1B0GTD5 131 aa9.23□□□□□ -0.93
CAPN3-221ENST00000638141 SPRY3O43610 288 aa9.23□□□□□ -0.93
CAPN3-221ENST00000638141 TNFAIP6P98066 277 aaPredicted RBP9.23□□□□□ -0.93
CAPN3-221ENST00000638141 FAM201AQ5SY85 155 aa9.23□□□□□ -0.93
CAPN3-221ENST00000638141 OR13C6PQ8NH95 151 aa9.23□□□□□ -0.93
CAPN3-221ENST00000638141 TRBV30A0A0K0K1B3 111 aa9.23□□□□□ -0.93
CAPN3-221ENST00000638141 ZZEF1O43149 2961 aa9.23□□□□□ -0.93
CAPN3-221ENST00000638141 ORM1P02763 201 aa9.23□□□□□ -0.93
CAPN3-221ENST00000638141 C9orf153Q5TBE3 101 aa9.23□□□□□ -0.93
CAPN3-221ENST00000638141 TMEM219Q86XT9 240 aa9.23□□□□□ -0.93
CAPN3-221ENST00000638141 RNF5Q99942 180 aa9.23□□□□□ -0.93
CAPN3-221ENST00000638141 CTSZQ9UBR2 303 aa9.23□□□□□ -0.93
CAPN3-221ENST00000638141 IGKV2-40A0A087WW87 121 aaPredicted RBP9.22□□□□□ -0.93
CAPN3-221ENST00000638141 TGFAP01135 160 aa9.22□□□□□ -0.93
CAPN3-221ENST00000638141 IGKV2D-40P01614 121 aaPredicted RBP9.22□□□□□ -0.93
CAPN3-221ENST00000638141 RPL7P18124 248 aaKnown RBP9.22□□□□□ -0.93
CAPN3-221ENST00000638141 FAM19A5Q7Z5A7 132 aaPredicted RBP9.22□□□□□ -0.93
CAPN3-221ENST00000638141 SLC50A1Q9BRV3 221 aa9.22□□□□□ -0.93
CAPN3-221ENST00000638141 IGF2RP11717 2491 aa9.22□□□□□ -0.93
CAPN3-221ENST00000638141 ACYP1P07311 99 aa9.22□□□□□ -0.93
CAPN3-221ENST00000638141 CNEP1R1Q8N9A8 125 aa9.22□□□□□ -0.93
CAPN3-221ENST00000638141 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.21□□□□□ -0.93
CAPN3-221ENST00000638141 IGHV3-21A0A0B4J1V1 117 aa9.21□□□□□ -0.93
CAPN3-221ENST00000638141 RBAKDNA6NC62 111 aa9.21□□□□□ -0.93
CAPN3-221ENST00000638141 HERVK_113P63121 156 aa9.21□□□□□ -0.93
CAPN3-221ENST00000638141 IGHV1-46P01743 117 aa9.21□□□□□ -0.94
CAPN3-221ENST00000638141 TMEM200BQ69YZ2 307 aa9.21□□□□□ -0.94
CAPN3-221ENST00000638141 APC2O95996 2303 aa9.2□□□□□ -0.94
CAPN3-221ENST00000638141 IGHV1-69DA0A0B4J2H0 117 aa9.2□□□□□ -0.94
CAPN3-221ENST00000638141 K7EIM0 57 aa9.2□□□□□ -0.94
CAPN3-221ENST00000638141 TRGV3P03979 118 aa9.2□□□□□ -0.94
CAPN3-221ENST00000638141 KLHL30-AS1Q8NEE0 82 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms