RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 H3BVH4 76 aa16.24■□□□□ 0.19
CLN6-224ENST00000638076 HNRNPA3P51991 378 aaKnown RBP16.24■□□□□ 0.19
CLN6-224ENST00000638076 FAM19A4Q96LR4 140 aa16.24■□□□□ 0.19
CLN6-224ENST00000638076 SPANXN1Q5VSR9 72 aa16.23■□□□□ 0.19
CLN6-224ENST00000638076 MAP1LC3AQ9H492 121 aa16.23■□□□□ 0.19
CLN6-224ENST00000638076 ZNF702PQ9H963 129 aa16.23■□□□□ 0.19
CLN6-224ENST00000638076 hDV102S1A0JD36 115 aa16.23■□□□□ 0.19
CLN6-224ENST00000638076 LINC01545Q5VT33 79 aa16.23■□□□□ 0.19
CLN6-224ENST00000638076 TNFRSF6BO95407 300 aa16.22■□□□□ 0.19
CLN6-224ENST00000638076 BATFQ16520 125 aa16.22■□□□□ 0.19
CLN6-224ENST00000638076 SMIM15Q7Z3B0 74 aa16.22■□□□□ 0.19
CLN6-224ENST00000638076 WFDC3Q8IUB2 231 aa16.22■□□□□ 0.19
CLN6-224ENST00000638076 DCANP1Q8TF63 244 aa16.22■□□□□ 0.19
CLN6-224ENST00000638076 PMCHL2Q9BQD1 86 aa16.22■□□□□ 0.19
CLN6-224ENST00000638076 LAMTOR2Q9Y2Q5 125 aa16.22■□□□□ 0.19
CLN6-224ENST00000638076 GATA1P15976 413 aaPredicted RBP16.22■□□□□ 0.19
CLN6-224ENST00000638076 RNASE4P34096 147 aaKnown RBP16.22■□□□□ 0.19
CLN6-224ENST00000638076 IGHV4-4A0A075B6R2 117 aa16.21■□□□□ 0.19
CLN6-224ENST00000638076 HBDP02042 147 aa16.21■□□□□ 0.19
CLN6-224ENST00000638076 CACNG7P62955 275 aa16.21■□□□□ 0.19
CLN6-224ENST00000638076 KIR3DS1Q14943 382 aa16.21■□□□□ 0.19
CLN6-224ENST00000638076 NAV2Q8IVL1 2488 aa16.21■□□□□ 0.19
CLN6-224ENST00000638076 ABCA12Q86UK0 2595 aa16.21■□□□□ 0.19
CLN6-224ENST00000638076 ID1P41134 155 aa16.2■□□□□ 0.18
CLN6-224ENST00000638076 TSPOP30536 169 aa16.2■□□□□ 0.18
CLN6-224ENST00000638076 ST20Q9HBF5 79 aa16.19■□□□□ 0.18
CLN6-224ENST00000638076 MXRA5Q9NR99 2828 aa16.19■□□□□ 0.18
CLN6-224ENST00000638076 HSBP1L1C9JCN9 74 aa16.19■□□□□ 0.18
CLN6-224ENST00000638076 ELANEP08246 267 aa16.19■□□□□ 0.18
CLN6-224ENST00000638076 ANXA2RQ3ZCQ2 193 aa16.19■□□□□ 0.18
CLN6-224ENST00000638076 APRG1Q8IVJ8 170 aa16.19■□□□□ 0.18
CLN6-224ENST00000638076 TRBV7-9A0A0J9YWB2 115 aa16.18■□□□□ 0.18
CLN6-224ENST00000638076 LGALS1P09382 135 aaKnown RBP16.18■□□□□ 0.18
CLN6-224ENST00000638076 KRTAP1-3Q8IUG1 177 aa16.18■□□□□ 0.18
CLN6-224ENST00000638076 SYNJ2BPP57105 145 aa16.18■□□□□ 0.18
CLN6-224ENST00000638076 MYOZ3Q8TDC0 251 aa16.18■□□□□ 0.18
CLN6-224ENST00000638076 MS4A6AQ9H2W1 248 aa16.18■□□□□ 0.18
CLN6-224ENST00000638076 S100A4P26447 101 aaKnown RBP16.17■□□□□ 0.18
CLN6-224ENST00000638076 TFPI2P48307 235 aa16.17■□□□□ 0.18
CLN6-224ENST00000638076 SAMD13Q5VXD3 122 aa16.17■□□□□ 0.18
CLN6-224ENST00000638076 DUX5Q96PT3 197 aa16.17■□□□□ 0.18
CLN6-224ENST00000638076 NXT2Q9NPJ8 142 aaKnown RBP16.17■□□□□ 0.18
CLN6-224ENST00000638076 PRRC2AP48634 2157 aaKnown RBP16.17■□□□□ 0.18
CLN6-224ENST00000638076 IGHV4OR15-8A0A075B7B6 117 aa16.17■□□□□ 0.18
CLN6-224ENST00000638076 A0A087WW49 117 aa16.17■□□□□ 0.18
CLN6-224ENST00000638076 TRAV26-2A0A0B4J265 109 aa16.17■□□□□ 0.18
CLN6-224ENST00000638076 SPRY2O43597 315 aa16.17■□□□□ 0.18
CLN6-224ENST00000638076 ASIPP42127 132 aa16.17■□□□□ 0.18
CLN6-224ENST00000638076 LINC01546A6NGU7 62 aa16.16■□□□□ 0.18
CLN6-224ENST00000638076 OR2K2Q8NGT1 345 aa16.16■□□□□ 0.18
CLN6-224ENST00000638076 UBE2E2Q96LR5 201 aa16.16■□□□□ 0.18
CLN6-224ENST00000638076 DOPEY2Q9Y3R5 2298 aa16.15■□□□□ 0.18
CLN6-224ENST00000638076 M0R381 172 aa16.15■□□□□ 0.18
CLN6-224ENST00000638076 TP73-AS1Q9UF72 201 aa16.15■□□□□ 0.18
CLN6-224ENST00000638076 MRPS16Q9Y3D3 137 aaKnown RBP16.15■□□□□ 0.18
CLN6-224ENST00000638076 GNRH2O43555 120 aa16.14■□□□□ 0.17
CLN6-224ENST00000638076 ZNF688P0C7X2 276 aa16.14■□□□□ 0.17
CLN6-224ENST00000638076 WFDC12Q8WWY7 111 aa16.14■□□□□ 0.17
CLN6-224ENST00000638076 IFI27L1Q96BM0 104 aa16.14■□□□□ 0.17
CLN6-224ENST00000638076 TEX15Q9BXT5 2789 aa16.14■□□□□ 0.17
CLN6-224ENST00000638076 KLLNB2CW77 178 aa16.13■□□□□ 0.17
CLN6-224ENST00000638076 HOXD3P31249 432 aaPredicted RBP16.13■□□□□ 0.17
CLN6-224ENST00000638076 LEPP41159 167 aa16.13■□□□□ 0.17
CLN6-224ENST00000638076 NRACQ8N912 160 aa16.13■□□□□ 0.17
CLN6-224ENST00000638076 PHLDA3Q9Y5J5 127 aa16.13■□□□□ 0.17
CLN6-224ENST00000638076 LGALS9O00182 355 aa16.13■□□□□ 0.17
CLN6-224ENST00000638076 PSMG4Q5JS54 123 aa16.13■□□□□ 0.17
CLN6-224ENST00000638076 RNF152Q8N8N0 203 aa16.13■□□□□ 0.17
CLN6-224ENST00000638076 ZNF469Q96JG9 3925 aaPredicted RBP16.13■□□□□ 0.17
CLN6-224ENST00000638076 APCP25054 2843 aa16.12■□□□□ 0.17
CLN6-224ENST00000638076 Q8N8P6 123 aa16.12■□□□□ 0.17
CLN6-224ENST00000638076 SCRT2Q9NQ03 307 aa16.12■□□□□ 0.17
CLN6-224ENST00000638076 GOLT1BQ9Y3E0 138 aa16.12■□□□□ 0.17
CLN6-224ENST00000638076 CREBBPQ92793 2442 aa16.12■□□□□ 0.17
CLN6-224ENST00000638076 IGLV2-18A0A075B6J9 118 aa16.12■□□□□ 0.17
CLN6-224ENST00000638076 FCER1GP30273 86 aa16.12■□□□□ 0.17
CLN6-224ENST00000638076 LGALS9BQ3B8N2 356 aa16.12■□□□□ 0.17
CLN6-224ENST00000638076 LGALS9CQ6DKI2 356 aa16.12■□□□□ 0.17
CLN6-224ENST00000638076 NBPF19A0A087WUL8 3843 aa16.11■□□□□ 0.17
CLN6-224ENST00000638076 RNASE3P12724 160 aaKnown RBP16.11■□□□□ 0.17
CLN6-224ENST00000638076 MED14OSP0DP75 135 aa16.11■□□□□ 0.17
CLN6-224ENST00000638076 SNRPD3P62318 126 aaKnown RBP16.11■□□□□ 0.17
CLN6-224ENST00000638076 COL5A1-AS1Q5SY13 56 aa16.11■□□□□ 0.17
CLN6-224ENST00000638076 C18orf15Q96N68 181 aa16.11■□□□□ 0.17
CLN6-224ENST00000638076 K7EQG2 157 aa16.1■□□□□ 0.17
CLN6-224ENST00000638076 SLC25A34Q6PIV7 304 aa16.1■□□□□ 0.17
CLN6-224ENST00000638076 MRAP2Q96G30 205 aa16.1■□□□□ 0.17
CLN6-224ENST00000638076 PRSS47A8MTI9 375 aa16.1■□□□□ 0.17
CLN6-224ENST00000638076 HINT1P49773 126 aaPredicted RBP16.1■□□□□ 0.17
CLN6-224ENST00000638076 Q8N2B8 174 aa16.1■□□□□ 0.17
CLN6-224ENST00000638076 STPG4Q8N801 248 aa16.1■□□□□ 0.17
CLN6-224ENST00000638076 C18orf65Q6ZTR6 163 aa16.09■□□□□ 0.17
CLN6-224ENST00000638076 C14orf178Q8N769 122 aaPredicted RBP16.09■□□□□ 0.17
CLN6-224ENST00000638076 DEFB125Q8N687 156 aa16.08■□□□□ 0.17
CLN6-224ENST00000638076 WFDC11Q8NEX6 87 aa16.08■□□□□ 0.17
CLN6-224ENST00000638076 TMEM158Q8WZ71 300 aa16.08■□□□□ 0.17
CLN6-224ENST00000638076 DEFB136Q30KP8 78 aa16.08■□□□□ 0.16
CLN6-224ENST00000638076 FAM159AQ6UWV7 190 aa16.08■□□□□ 0.16
CLN6-224ENST00000638076 DPH3P1Q9H4G8 78 aa16.08■□□□□ 0.16
CLN6-224ENST00000638076 TRAV12-3A0A0B4J271 114 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms