RNA–Protein interactions for RNA: ENST00000637538.1

CLCN2-220, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 1,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-220ENST00000637538 IGKV3-20P01619 116 aa12.33□□□□□ -0.44
CLCN2-220ENST00000637538 GPX1P07203 203 aa12.33□□□□□ -0.44
CLCN2-220ENST00000637538 IGLL1P15814 213 aa12.33□□□□□ -0.44
CLCN2-220ENST00000637538 NDUFA6P56556 154 aa12.33□□□□□ -0.44
CLCN2-220ENST00000637538 GTSF1Q8WW33 167 aa12.33□□□□□ -0.44
CLCN2-220ENST00000637538 NEU1Q99519 415 aa12.33□□□□□ -0.44
CLCN2-220ENST00000637538 TMEM189A5PLL7 270 aa12.32□□□□□ -0.44
CLCN2-220ENST00000637538 TSPOP30536 169 aa12.32□□□□□ -0.44
CLCN2-220ENST00000637538 CDKN1BP46527 198 aa12.32□□□□□ -0.44
CLCN2-220ENST00000637538 FOXA3P55318 350 aaPredicted RBP12.32□□□□□ -0.44
CLCN2-220ENST00000637538 COX19Q49B96 90 aa12.32□□□□□ -0.44
CLCN2-220ENST00000637538 TRPT1Q86TN4 253 aaKnown RBP12.32□□□□□ -0.44
CLCN2-220ENST00000637538 MGAM2Q2M2H8 2515 aa12.32□□□□□ -0.44
CLCN2-220ENST00000637538 TRAV21A0A0B4J279 112 aa12.32□□□□□ -0.44
CLCN2-220ENST00000637538 IGKV3D-20A0A0C4DH25 116 aa12.32□□□□□ -0.44
CLCN2-220ENST00000637538 J3KRW8 73 aa12.32□□□□□ -0.44
CLCN2-220ENST00000637538 M0R2Z0 102 aa12.32□□□□□ -0.44
CLCN2-220ENST00000637538 ZNF324O75467 553 aaPredicted RBP12.32□□□□□ -0.44
CLCN2-220ENST00000637538 RNASE4P34096 147 aaKnown RBP12.32□□□□□ -0.44
CLCN2-220ENST00000637538 TCL1AP56279 114 aa12.32□□□□□ -0.44
CLCN2-220ENST00000637538 GFI1BQ5VTD9 330 aa12.32□□□□□ -0.44
CLCN2-220ENST00000637538 NAT8BQ9UHF3 227 aa12.32□□□□□ -0.44
CLCN2-220ENST00000637538 C7orf71A4D174 169 aa12.31□□□□□ -0.44
CLCN2-220ENST00000637538 GZMBP10144 247 aa12.31□□□□□ -0.44
CLCN2-220ENST00000637538 AKR1D1P51857 326 aa12.31□□□□□ -0.44
CLCN2-220ENST00000637538 RPS20P60866 119 aaKnown RBP12.31□□□□□ -0.44
CLCN2-220ENST00000637538 SPINK13Q1W4C9 94 aa12.31□□□□□ -0.44
CLCN2-220ENST00000637538 NUP35Q8NFH5 326 aa12.31□□□□□ -0.44
CLCN2-220ENST00000637538 WFDC10AQ9H1F0 79 aa12.31□□□□□ -0.44
CLCN2-220ENST00000637538 TRAPPC1Q9Y5R8 145 aa12.31□□□□□ -0.44
CLCN2-220ENST00000637538 HIGD1CA8MV81 97 aa12.3□□□□□ -0.44
CLCN2-220ENST00000637538 CRXO43186 299 aaPredicted RBP12.3□□□□□ -0.44
CLCN2-220ENST00000637538 ORM1P02763 201 aa12.3□□□□□ -0.44
CLCN2-220ENST00000637538 PKD1L1Q8TDX9 2849 aa12.29□□□□□ -0.44
CLCN2-220ENST00000637538 S100A8P05109 93 aa12.29□□□□□ -0.44
CLCN2-220ENST00000637538 GNB1LQ9BYB4 327 aa12.29□□□□□ -0.44
CLCN2-220ENST00000637538 TRAV12-2A0A075B6T6 113 aa12.28□□□□□ -0.44
CLCN2-220ENST00000637538 TMSB15BA0A087X1C1 80 aa12.28□□□□□ -0.44
CLCN2-220ENST00000637538 XKRY2A2RUG3 117 aa12.28□□□□□ -0.44
CLCN2-220ENST00000637538 IGLC6P0CF74 106 aa12.28□□□□□ -0.44
CLCN2-220ENST00000637538 COA6Q5JTJ3 125 aaKnown RBP12.28□□□□□ -0.44
CLCN2-220ENST00000637538 STHQ8IWL8 128 aa12.28□□□□□ -0.44
CLCN2-220ENST00000637538 WDR73Q6P4I2 378 aa12.27□□□□□ -0.44
CLCN2-220ENST00000637538 RASL11AQ6T310 242 aa12.27□□□□□ -0.44
CLCN2-220ENST00000637538 LINC00518Q8N0U6 118 aa12.27□□□□□ -0.44
CLCN2-220ENST00000637538 TRAV12-3A0A0B4J271 114 aa12.27□□□□□ -0.45
CLCN2-220ENST00000637538 MT-ND6P03923 174 aa12.27□□□□□ -0.45
CLCN2-220ENST00000637538 FRMD6-AS1P0C7T7 363 aa12.27□□□□□ -0.45
CLCN2-220ENST00000637538 RBMY1A1P0DJD3 496 aaKnown RBP12.27□□□□□ -0.45
CLCN2-220ENST00000637538 RBMY1CP0DJD4 496 aa12.27□□□□□ -0.45
CLCN2-220ENST00000637538 CTRLP40313 264 aa12.27□□□□□ -0.45
CLCN2-220ENST00000637538 FXYD7P58549 80 aa12.27□□□□□ -0.45
CLCN2-220ENST00000637538 RBMY1FQ15415 496 aaKnown RBP12.27□□□□□ -0.45
CLCN2-220ENST00000637538 TDRG1Q3Y452 100 aa12.27□□□□□ -0.45
CLCN2-220ENST00000637538 ANXA2RQ3ZCQ2 193 aa12.27□□□□□ -0.45
CLCN2-220ENST00000637538 A0A1B0GXF2 115 aa12.26□□□□□ -0.45
CLCN2-220ENST00000637538 GRIFINA4D1Z8 144 aa12.26□□□□□ -0.45
CLCN2-220ENST00000637538 DNLZQ5SXM8 178 aa12.26□□□□□ -0.45
CLCN2-220ENST00000637538 GTSCR1Q86UQ5 136 aa12.26□□□□□ -0.45
CLCN2-220ENST00000637538 Q8N1Y9 231 aa12.26□□□□□ -0.45
CLCN2-220ENST00000637538 PGLYRP4Q96LB8 373 aa12.26□□□□□ -0.45
CLCN2-220ENST00000637538 MEGF8Q7Z7M0 2845 aa12.26□□□□□ -0.45
CLCN2-220ENST00000637538 AMBPP02760 352 aa12.25□□□□□ -0.45
CLCN2-220ENST00000637538 ATP5L2Q7Z4Y8 100 aa12.25□□□□□ -0.45
CLCN2-220ENST00000637538 DEFB125Q8N687 156 aa12.25□□□□□ -0.45
CLCN2-220ENST00000637538 SPINK4O60575 86 aa12.24□□□□□ -0.45
CLCN2-220ENST00000637538 GIG44P09565 113 aaPredicted RBP12.24□□□□□ -0.45
CLCN2-220ENST00000637538 MUC21Q5SSG8 566 aa12.24□□□□□ -0.45
CLCN2-220ENST00000637538 LYZL1Q6UWQ5 148 aa12.24□□□□□ -0.45
CLCN2-220ENST00000637538 HIST3H2BBQ8N257 126 aa12.24□□□□□ -0.45
CLCN2-220ENST00000637538 FER1L6-AS1Q8NA97 138 aa12.24□□□□□ -0.45
CLCN2-220ENST00000637538 SSBP4Q9BWG4 385 aaPredicted RBP12.24□□□□□ -0.45
CLCN2-220ENST00000637538 CNFNQ9BYD5 112 aa12.24□□□□□ -0.45
CLCN2-220ENST00000637538 MRPL18Q9H0U6 180 aaKnown RBP12.24□□□□□ -0.45
CLCN2-220ENST00000637538 NAGKQ9UJ70 344 aa12.24□□□□□ -0.45
CLCN2-220ENST00000637538 EGFEM1PQ0D2K5 195 aa12.23□□□□□ -0.45
CLCN2-220ENST00000637538 OXLD1Q5BKU9 147 aa12.23□□□□□ -0.45
CLCN2-220ENST00000637538 MRPL54Q6P161 138 aaKnown RBP12.23□□□□□ -0.45
CLCN2-220ENST00000637538 C20orf144Q9BQM9 153 aa12.23□□□□□ -0.45
CLCN2-220ENST00000637538 SNURFLB1AK76 121 aa12.22□□□□□ -0.45
CLCN2-220ENST00000637538 SNAI2O43623 268 aa12.22□□□□□ -0.45
CLCN2-220ENST00000637538 HLA-DQA1P01909 254 aa12.22□□□□□ -0.45
CLCN2-220ENST00000637538 ARMS2P0C7Q2 107 aa12.22□□□□□ -0.45
CLCN2-220ENST00000637538 TMEM136Q6ZRR5 245 aa12.22□□□□□ -0.45
CLCN2-220ENST00000637538 DNAH3Q8TD57 4116 aa12.22□□□□□ -0.45
CLCN2-220ENST00000637538 KCNS1Q96KK3 526 aa12.22□□□□□ -0.45
CLCN2-220ENST00000637538 IGHV1OR15-1A0A075B7D0 117 aa12.21□□□□□ -0.45
CLCN2-220ENST00000637538 A0A1B0GUT8 65 aa12.21□□□□□ -0.45
CLCN2-220ENST00000637538 IFITM10A6NMD0 228 aa12.21□□□□□ -0.45
CLCN2-220ENST00000637538 GNRH2O43555 120 aa12.21□□□□□ -0.45
CLCN2-220ENST00000637538 INSP01308 110 aa12.21□□□□□ -0.45
CLCN2-220ENST00000637538 OR5AL1P0C617 328 aa12.21□□□□□ -0.45
CLCN2-220ENST00000637538 MED14OSP0DP75 135 aa12.21□□□□□ -0.45
CLCN2-220ENST00000637538 NUTF2P61970 127 aaKnown RBP12.21□□□□□ -0.45
CLCN2-220ENST00000637538 FAM159AQ6UWV7 190 aa12.21□□□□□ -0.45
CLCN2-220ENST00000637538 LINC00467Q9BRT7 94 aa12.21□□□□□ -0.45
CLCN2-220ENST00000637538 SCRT2Q9NQ03 307 aa12.21□□□□□ -0.45
CLCN2-220ENST00000637538 F2Z2F3 143 aa12.21□□□□□ -0.46
CLCN2-220ENST00000637538 RNASE3P12724 160 aaKnown RBP12.21□□□□□ -0.46
CLCN2-220ENST00000637538 S100A2P29034 98 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms