RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 NEGR1Q7Z3B1 354 aa13.06□□□□□ -0.32
CLN6-213ENST00000636212 ZNF575Q86XF7 245 aa13.06□□□□□ -0.32
CLN6-213ENST00000636212 OR4C5Q8NGB2 326 aa13.06□□□□□ -0.32
CLN6-213ENST00000636212 SH3BGRL3Q9H299 93 aa13.06□□□□□ -0.32
CLN6-213ENST00000636212 TRAV4A0A0B4J268 109 aa13.05□□□□□ -0.32
CLN6-213ENST00000636212 FBLL1A6NHQ2 334 aaKnown RBP13.05□□□□□ -0.32
CLN6-213ENST00000636212 GNRH2O43555 120 aa13.05□□□□□ -0.32
CLN6-213ENST00000636212 NXPH4O95158 308 aa13.05□□□□□ -0.32
CLN6-213ENST00000636212 SFTA3P0C7M3 94 aa13.05□□□□□ -0.32
CLN6-213ENST00000636212 SUMO1P63165 101 aaKnown RBP13.05□□□□□ -0.32
CLN6-213ENST00000636212 SUN5Q8TC36 379 aa13.05□□□□□ -0.32
CLN6-213ENST00000636212 ZNF479Q96JC4 524 aa13.05□□□□□ -0.32
CLN6-213ENST00000636212 SGK494Q96LW2 274 aa13.05□□□□□ -0.32
CLN6-213ENST00000636212 DNAH17Q9UFH2 4485 aa13.04□□□□□ -0.32
CLN6-213ENST00000636212 IGHV3-16A0A0C4DH30 117 aa13.04□□□□□ -0.32
CLN6-213ENST00000636212 C9JCJ5 164 aa13.04□□□□□ -0.32
CLN6-213ENST00000636212 TAAR5O14804 337 aa13.04□□□□□ -0.32
CLN6-213ENST00000636212 ARPC5O15511 151 aa13.04□□□□□ -0.32
CLN6-213ENST00000636212 TYMSP04818 313 aa13.04□□□□□ -0.32
CLN6-213ENST00000636212 RPL7L1Q6DKI1 246 aaKnown RBP13.04□□□□□ -0.32
CLN6-213ENST00000636212 TVP23CQ96ET8 276 aa13.04□□□□□ -0.32
CLN6-213ENST00000636212 KRTAP1-5Q9BYS1 174 aa13.04□□□□□ -0.32
CLN6-213ENST00000636212 PSG8Q9UQ74 426 aa13.04□□□□□ -0.32
CLN6-213ENST00000636212 FAT2Q9NYQ8 4349 aa13.04□□□□□ -0.32
CLN6-213ENST00000636212 MUC4Q99102 2169 aa13.03□□□□□ -0.32
CLN6-213ENST00000636212 TRAV9-2A0A087WT02 112 aa13.03□□□□□ -0.32
CLN6-213ENST00000636212 SMLR1H3BR10 107 aa13.03□□□□□ -0.32
CLN6-213ENST00000636212 GYPEP15421 78 aa13.03□□□□□ -0.32
CLN6-213ENST00000636212 FLI1Q01543 452 aaPredicted RBP13.03□□□□□ -0.32
CLN6-213ENST00000636212 ZNF345Q14585 488 aa13.03□□□□□ -0.32
CLN6-213ENST00000636212 SMUG1Q53HV7 270 aa13.03□□□□□ -0.32
CLN6-213ENST00000636212 LYPD5Q6UWN5 251 aa13.03□□□□□ -0.32
CLN6-213ENST00000636212 CYB561D1Q8N8Q1 229 aa13.03□□□□□ -0.32
CLN6-213ENST00000636212 TXNDC17Q9BRA2 123 aa13.03□□□□□ -0.32
CLN6-213ENST00000636212 EPDR1Q9UM22 224 aa13.03□□□□□ -0.32
CLN6-213ENST00000636212 K7EQD1 137 aa13.02□□□□□ -0.33
CLN6-213ENST00000636212 GCGP01275 180 aa13.02□□□□□ -0.33
CLN6-213ENST00000636212 PPT1P50897 306 aa13.02□□□□□ -0.33
CLN6-213ENST00000636212 SAPCD1Q5SSQ6 148 aa13.02□□□□□ -0.33
CLN6-213ENST00000636212 AKR1C8PQ5T2L2 129 aa13.02□□□□□ -0.33
CLN6-213ENST00000636212 PRNTQ86SH4 94 aa13.02□□□□□ -0.33
CLN6-213ENST00000636212 TMEM75Q8N9X5 138 aa13.02□□□□□ -0.33
CLN6-213ENST00000636212 HERC2O95714 4834 aa13.01□□□□□ -0.33
CLN6-213ENST00000636212 CTXND1A0A1B0GTU2 59 aa13.01□□□□□ -0.33
CLN6-213ENST00000636212 A0A1W2PRE2 83 aa13.01□□□□□ -0.33
CLN6-213ENST00000636212 IFNA7P01567 189 aa13.01□□□□□ -0.33
CLN6-213ENST00000636212 SH2D6Q7Z4S9 175 aa13.01□□□□□ -0.33
CLN6-213ENST00000636212 HMSDA8MTL9 139 aa13□□□□□ -0.33
CLN6-213ENST00000636212 GGTLC3B5MD39 225 aa13□□□□□ -0.33
CLN6-213ENST00000636212 PFN1P07737 140 aaKnown RBP13□□□□□ -0.33
CLN6-213ENST00000636212 LINC00315P59091 139 aa13□□□□□ -0.33
CLN6-213ENST00000636212 NKX6-2Q9C056 277 aaPredicted RBP13□□□□□ -0.33
CLN6-213ENST00000636212 CIDEAO60543 219 aa12.99□□□□□ -0.33
CLN6-213ENST00000636212 ZNF876PQ49A33 203 aa12.99□□□□□ -0.33
CLN6-213ENST00000636212 TCTE3Q8IZS6 198 aa12.99□□□□□ -0.33
CLN6-213ENST00000636212 LY96Q9Y6Y9 160 aa12.99□□□□□ -0.33
CLN6-213ENST00000636212 EREGO14944 169 aa12.98□□□□□ -0.33
CLN6-213ENST00000636212 SPATA12Q7Z6I5 190 aa12.98□□□□□ -0.33
CLN6-213ENST00000636212 NFE4Q86UQ8 179 aa12.98□□□□□ -0.33
CLN6-213ENST00000636212 KCNRGQ8N5I3 272 aa12.98□□□□□ -0.33
CLN6-213ENST00000636212 NHLRC2Q8NBF2 726 aa12.98□□□□□ -0.33
CLN6-213ENST00000636212 OR11H4Q8NGC9 324 aa12.98□□□□□ -0.33
CLN6-213ENST00000636212 K7EP13 123 aa12.97□□□□□ -0.33
CLN6-213ENST00000636212 EVI2AP22794 236 aa12.97□□□□□ -0.33
CLN6-213ENST00000636212 ZNF80P51504 273 aaPredicted RBP12.97□□□□□ -0.33
CLN6-213ENST00000636212 hCG_2014768A0A024R1R8 64 aa12.96□□□□□ -0.33
CLN6-213ENST00000636212 IGLV2-11P01706 119 aa12.96□□□□□ -0.33
CLN6-213ENST00000636212 S100A4P26447 101 aaKnown RBP12.96□□□□□ -0.33
CLN6-213ENST00000636212 UBE2G2P60604 165 aa12.96□□□□□ -0.33
CLN6-213ENST00000636212 AKAP14Q86UN6 197 aa12.96□□□□□ -0.33
CLN6-213ENST00000636212 PRADC1Q9BSG0 188 aa12.96□□□□□ -0.33
CLN6-213ENST00000636212 PKD1P98161 4303 aa12.96□□□□□ -0.34
CLN6-213ENST00000636212 KIAA1109Q2LD37 5005 aa12.95□□□□□ -0.34
CLN6-213ENST00000636212 A0A0D9SG52 128 aa12.95□□□□□ -0.34
CLN6-213ENST00000636212 GATA1P15976 413 aaPredicted RBP12.95□□□□□ -0.34
CLN6-213ENST00000636212 ZNF726P1Q15940 193 aa12.95□□□□□ -0.34
CLN6-213ENST00000636212 STOML3Q8TAV4 291 aa12.95□□□□□ -0.34
CLN6-213ENST00000636212 HIST1H2BAQ96A08 127 aa12.95□□□□□ -0.34
CLN6-213ENST00000636212 FABP5P3A8MUU1 101 aa12.94□□□□□ -0.34
CLN6-213ENST00000636212 PEX7O00628 323 aa12.94□□□□□ -0.34
CLN6-213ENST00000636212 BCL2L11O43521 198 aa12.94□□□□□ -0.34
CLN6-213ENST00000636212 CDK2AP2O75956 126 aa12.94□□□□□ -0.34
CLN6-213ENST00000636212 FGF8P55075 233 aaPredicted RBP12.94□□□□□ -0.34
CLN6-213ENST00000636212 ERVFC1-1P60608 527 aa12.94□□□□□ -0.34
CLN6-213ENST00000636212 CYTL1Q9NRR1 136 aa12.94□□□□□ -0.34
CLN6-213ENST00000636212 C11orf21Q9P2W6 132 aa12.94□□□□□ -0.34
CLN6-213ENST00000636212 BOLA1Q9Y3E2 137 aa12.94□□□□□ -0.34
CLN6-213ENST00000636212 ARL2-SNX15V9GYD0 113 aa12.94□□□□□ -0.34
CLN6-213ENST00000636212 PKHD1P08F94 4074 aa12.93□□□□□ -0.34
CLN6-213ENST00000636212 TRAV34A0A0B4J273 112 aa12.93□□□□□ -0.34
CLN6-213ENST00000636212 KANTRA0A1W2PQU2 76 aa12.93□□□□□ -0.34
CLN6-213ENST00000636212 MAP1LC3B2A6NCE7 125 aa12.93□□□□□ -0.34
CLN6-213ENST00000636212 RS1O15537 224 aa12.93□□□□□ -0.34
CLN6-213ENST00000636212 RHOHQ15669 191 aa12.93□□□□□ -0.34
CLN6-213ENST00000636212 CFAP126Q5VTH2 177 aa12.93□□□□□ -0.34
CLN6-213ENST00000636212 C10orf126Q8N4M7 172 aa12.93□□□□□ -0.34
CLN6-213ENST00000636212 PTH2Q96A98 100 aa12.93□□□□□ -0.34
CLN6-213ENST00000636212 C9orf85Q96MD7 179 aa12.93□□□□□ -0.34
CLN6-213ENST00000636212 MAP1LC3BQ9GZQ8 125 aa12.93□□□□□ -0.34
CLN6-213ENST00000636212 TRBV6-4A0A1B0GX49 114 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms