RNA–Protein interactions for RNA: ENST00000635994.1

GABRB3-218, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,192 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-218ENST00000635994 SPATA25Q9BR10 227 aa4.99□□□□□ -1.61
GABRB3-218ENST00000635994 WFDC1Q9HC57 220 aa4.99□□□□□ -1.61
GABRB3-218ENST00000635994 GSN-AS1Q9NRJ2 163 aa4.99□□□□□ -1.61
GABRB3-218ENST00000635994 TRAV12-2A0A075B6T6 113 aa4.99□□□□□ -1.61
GABRB3-218ENST00000635994 A0A096LPF7 62 aa4.99□□□□□ -1.61
GABRB3-218ENST00000635994 TRAV4A0A0B4J268 109 aa4.99□□□□□ -1.61
GABRB3-218ENST00000635994 RBM3P98179 157 aaKnown RBP4.99□□□□□ -1.61
GABRB3-218ENST00000635994 VSIRQ9H7M9 311 aa4.99□□□□□ -1.61
GABRB3-218ENST00000635994 ETV2O00321 342 aaPredicted RBP4.99□□□□□ -1.61
GABRB3-218ENST00000635994 POU2AF1Q16633 256 aa4.99□□□□□ -1.61
GABRB3-218ENST00000635994 C10orf105Q8TEF2 133 aa4.99□□□□□ -1.61
GABRB3-218ENST00000635994 IGFBPL1Q8WX77 278 aa4.99□□□□□ -1.61
GABRB3-218ENST00000635994 RALGAPA1Q6GYQ0 2036 aa4.99□□□□□ -1.61
GABRB3-218ENST00000635994 SMKR1H3BMG3 65 aa4.99□□□□□ -1.61
GABRB3-218ENST00000635994 C3orf79P0CE67 100 aa4.99□□□□□ -1.61
GABRB3-218ENST00000635994 FGF6P10767 208 aa4.99□□□□□ -1.61
GABRB3-218ENST00000635994 NREPQ16612 68 aa4.99□□□□□ -1.61
GABRB3-218ENST00000635994 Q6ZQT7 251 aa4.99□□□□□ -1.61
GABRB3-218ENST00000635994 DEFB105AQ8NG35 78 aa4.99□□□□□ -1.61
GABRB3-218ENST00000635994 ARHGEF17Q96PE2 2063 aaPredicted RBP4.99□□□□□ -1.61
GABRB3-218ENST00000635994 CENPVL3A0A0U1RRI6 287 aa4.98□□□□□ -1.61
GABRB3-218ENST00000635994 SHISA9B4DS77 424 aa4.98□□□□□ -1.61
GABRB3-218ENST00000635994 J3QRE1 110 aa4.98□□□□□ -1.61
GABRB3-218ENST00000635994 SPINK8P0C7L1 97 aa4.98□□□□□ -1.61
GABRB3-218ENST00000635994 HOXB4P17483 251 aaPredicted RBP4.98□□□□□ -1.61
GABRB3-218ENST00000635994 HIST1H2BLQ99880 126 aa4.98□□□□□ -1.61
GABRB3-218ENST00000635994 MTCL1Q9Y4B5 1905 aaKnown RBP4.98□□□□□ -1.61
GABRB3-218ENST00000635994 PROP1O75360 226 aa4.98□□□□□ -1.61
GABRB3-218ENST00000635994 NDUFS6O75380 124 aaKnown RBP4.98□□□□□ -1.61
GABRB3-218ENST00000635994 LINC01620Q4KN68 170 aa4.98□□□□□ -1.61
GABRB3-218ENST00000635994 NDUFA11Q86Y39 141 aa4.98□□□□□ -1.61
GABRB3-218ENST00000635994 ZC2HC1AQ96GY0 325 aa4.98□□□□□ -1.61
GABRB3-218ENST00000635994 hDV102S1A0JD36 115 aa4.98□□□□□ -1.61
GABRB3-218ENST00000635994 RNF138Q8WVD3 245 aa4.98□□□□□ -1.61
GABRB3-218ENST00000635994 CARD19Q96LW7 228 aa4.98□□□□□ -1.61
GABRB3-218ENST00000635994 JMJD7-PLA2G4BH0Y9G9 81 aa4.98□□□□□ -1.61
GABRB3-218ENST00000635994 CCL25O15444 150 aa4.98□□□□□ -1.61
GABRB3-218ENST00000635994 LINC00479Q96M42 142 aa4.98□□□□□ -1.61
GABRB3-218ENST00000635994 LY6G6EA0A0G2JKS1 128 aa4.97□□□□□ -1.61
GABRB3-218ENST00000635994 SMIM9A6NGZ8 99 aa4.97□□□□□ -1.61
GABRB3-218ENST00000635994 IGHV3-30P01768 117 aa4.97□□□□□ -1.61
GABRB3-218ENST00000635994 IGHV3-33P01772 117 aa4.97□□□□□ -1.61
GABRB3-218ENST00000635994 IGHV3-30-3P0DP02 117 aa4.97□□□□□ -1.61
GABRB3-218ENST00000635994 IGHV3-30-5P0DP03 117 aa4.97□□□□□ -1.61
GABRB3-218ENST00000635994 CASC2Q6XLA1 102 aa4.97□□□□□ -1.61
GABRB3-218ENST00000635994 C4orf3Q8WVX3 66 aa4.97□□□□□ -1.61
GABRB3-218ENST00000635994 U3KQA8 63 aa4.97□□□□□ -1.61
GABRB3-218ENST00000635994 F8W1H4 67 aa4.97□□□□□ -1.61
GABRB3-218ENST00000635994 MRPL51Q4U2R6 128 aaKnown RBP4.97□□□□□ -1.61
GABRB3-218ENST00000635994 ANKRD29Q8N6D5 301 aa4.97□□□□□ -1.61
GABRB3-218ENST00000635994 C11orf45Q8TAV5 145 aa4.97□□□□□ -1.61
GABRB3-218ENST00000635994 TMEM213A2RRL7 107 aa4.97□□□□□ -1.61
GABRB3-218ENST00000635994 LINC01548A6NM66 108 aa4.97□□□□□ -1.61
GABRB3-218ENST00000635994 IGLC1P0CG04 106 aa4.97□□□□□ -1.61
GABRB3-218ENST00000635994 CLPSL2Q6UWE3 100 aa4.97□□□□□ -1.61
GABRB3-218ENST00000635994 AMTNQ6UX39 209 aa4.97□□□□□ -1.61
GABRB3-218ENST00000635994 CEP350Q5VT06 3117 aa4.97□□□□□ -1.61
GABRB3-218ENST00000635994 A8MWP6 167 aa4.97□□□□□ -1.61
GABRB3-218ENST00000635994 SIVA1O15304 175 aa4.97□□□□□ -1.61
GABRB3-218ENST00000635994 C17orf58Q2M2W7 97 aa4.97□□□□□ -1.61
GABRB3-218ENST00000635994 MORN5Q5VZ52 161 aa4.97□□□□□ -1.61
GABRB3-218ENST00000635994 HIST2H2BCQ6DN03 193 aa4.97□□□□□ -1.61
GABRB3-218ENST00000635994 HIST3H2BBQ8N257 126 aa4.97□□□□□ -1.61
GABRB3-218ENST00000635994 DIRC1Q969H9 104 aa4.97□□□□□ -1.61
GABRB3-218ENST00000635994 RS1O15537 224 aa4.96□□□□□ -1.61
GABRB3-218ENST00000635994 SPRY2O43597 315 aa4.96□□□□□ -1.61
GABRB3-218ENST00000635994 ADAMTSL5Q6ZMM2 481 aa4.96□□□□□ -1.61
GABRB3-218ENST00000635994 ODF3L1Q8IXM7 274 aa4.96□□□□□ -1.61
GABRB3-218ENST00000635994 Q9H8V8 135 aa4.96□□□□□ -1.61
GABRB3-218ENST00000635994 PRO0255Q9UI72 69 aa4.96□□□□□ -1.61
GABRB3-218ENST00000635994 HHLA3Q9XRX5 114 aa4.96□□□□□ -1.61
GABRB3-218ENST00000635994 MED13LQ71F56 2210 aa4.96□□□□□ -1.61
GABRB3-218ENST00000635994 IGLV2-23P01705 113 aa4.96□□□□□ -1.62
GABRB3-218ENST00000635994 RNF144BQ7Z419 303 aa4.96□□□□□ -1.62
GABRB3-218ENST00000635994 FAM215AQ9Y5M1 114 aa4.96□□□□□ -1.62
GABRB3-218ENST00000635994 IGHG2P01859 326 aa4.96□□□□□ -1.62
GABRB3-218ENST00000635994 LOXL1Q08397 574 aaPredicted RBP4.96□□□□□ -1.62
GABRB3-218ENST00000635994 DYNAPQ8N1N2 210 aa4.96□□□□□ -1.62
GABRB3-218ENST00000635994 NPBQ8NG41 125 aa4.96□□□□□ -1.62
GABRB3-218ENST00000635994 GFI1Q99684 422 aa4.96□□□□□ -1.62
GABRB3-218ENST00000635994 ZNF706Q9Y5V0 76 aaPredicted RBP4.96□□□□□ -1.62
GABRB3-218ENST00000635994 GBF1Q92538 1859 aa4.96□□□□□ -1.62
GABRB3-218ENST00000635994 ANKRD36A6QL64 1941 aa4.96□□□□□ -1.62
GABRB3-218ENST00000635994 A0A087X0K7 114 aa4.96□□□□□ -1.62
GABRB3-218ENST00000635994 MED14OSP0DP75 135 aa4.96□□□□□ -1.62
GABRB3-218ENST00000635994 FHL1Q13642 323 aa4.96□□□□□ -1.62
GABRB3-218ENST00000635994 COX7B2Q8TF08 81 aa4.96□□□□□ -1.62
GABRB3-218ENST00000635994 PRORYQ9H606 182 aa4.96□□□□□ -1.62
GABRB3-218ENST00000635994 IGHV4-61A0A0C4DH41 118 aa4.95□□□□□ -1.62
GABRB3-218ENST00000635994 TRBV10-1A0A0K0K1A3 114 aa4.95□□□□□ -1.62
GABRB3-218ENST00000635994 SPAG11BQ08648 103 aa4.95□□□□□ -1.62
GABRB3-218ENST00000635994 HIGD2BQ4VC39 106 aa4.95□□□□□ -1.62
GABRB3-218ENST00000635994 PRSS57Q6UWY2 283 aa4.95□□□□□ -1.62
GABRB3-218ENST00000635994 WFDC9Q8NEX5 89 aa4.95□□□□□ -1.62
GABRB3-218ENST00000635994 CKAP5Q14008 2032 aa4.95□□□□□ -1.62
GABRB3-218ENST00000635994 TRAV12-1A0A0B4J245 112 aa4.95□□□□□ -1.62
GABRB3-218ENST00000635994 LYL1P12980 280 aa4.95□□□□□ -1.62
GABRB3-218ENST00000635994 C5orf38Q86SI9 138 aa4.95□□□□□ -1.62
GABRB3-218ENST00000635994 DEFB104AQ8WTQ1 72 aa4.95□□□□□ -1.62
GABRB3-218ENST00000635994 ZFC3H1O60293 1989 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms