RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 C8orf49Q96NF6 230 aa10.98□□□□□ -0.65
LINC00339-207ENST00000634712 IGLV2-18A0A075B6J9 118 aa10.97□□□□□ -0.65
LINC00339-207ENST00000634712 TRAV34A0A0B4J273 112 aa10.97□□□□□ -0.65
LINC00339-207ENST00000634712 H3BNG1 76 aa10.97□□□□□ -0.65
LINC00339-207ENST00000634712 PEX7O00628 323 aa10.97□□□□□ -0.65
LINC00339-207ENST00000634712 GCGP01275 180 aa10.97□□□□□ -0.65
LINC00339-207ENST00000634712 IGHV3-53P01767 116 aa10.97□□□□□ -0.65
LINC00339-207ENST00000634712 CST9LP1Q5W188 147 aa10.97□□□□□ -0.65
LINC00339-207ENST00000634712 DNAH6Q9C0G6 4158 aa10.96□□□□□ -0.65
LINC00339-207ENST00000634712 IGLV2-11P01706 119 aa10.96□□□□□ -0.65
LINC00339-207ENST00000634712 DPPA3Q6W0C5 159 aa10.96□□□□□ -0.65
LINC00339-207ENST00000634712 Q6ZNX1 250 aa10.96□□□□□ -0.65
LINC00339-207ENST00000634712 TCTE3Q8IZS6 198 aa10.96□□□□□ -0.65
LINC00339-207ENST00000634712 LINC00479Q96M42 142 aa10.96□□□□□ -0.65
LINC00339-207ENST00000634712 TYMSP04818 313 aa10.95□□□□□ -0.66
LINC00339-207ENST00000634712 PFN1P07737 140 aaKnown RBP10.95□□□□□ -0.66
LINC00339-207ENST00000634712 SLAQ13239 276 aa10.95□□□□□ -0.66
LINC00339-207ENST00000634712 MBD3L1Q8WWY6 194 aa10.95□□□□□ -0.66
LINC00339-207ENST00000634712 TRGV4A0A0C4DH28 118 aa10.94□□□□□ -0.66
LINC00339-207ENST00000634712 IGHV3-16A0A0C4DH30 117 aa10.94□□□□□ -0.66
LINC00339-207ENST00000634712 A0A1B0GV50 99 aa10.94□□□□□ -0.66
LINC00339-207ENST00000634712 M0R2P5 195 aa10.94□□□□□ -0.66
LINC00339-207ENST00000634712 PAX4O43316 350 aa10.94□□□□□ -0.66
LINC00339-207ENST00000634712 H2AFB1P0C5Y9 115 aa10.94□□□□□ -0.66
LINC00339-207ENST00000634712 ZNF80P51504 273 aaPredicted RBP10.94□□□□□ -0.66
LINC00339-207ENST00000634712 UBE2G1P62253 170 aa10.94□□□□□ -0.66
LINC00339-207ENST00000634712 EIF5AL1Q6IS14 154 aaKnown RBP10.94□□□□□ -0.66
LINC00339-207ENST00000634712 RASL10AQ92737 203 aa10.94□□□□□ -0.66
LINC00339-207ENST00000634712 TCEAL7Q9BRU2 100 aa10.94□□□□□ -0.66
LINC00339-207ENST00000634712 ARL2-SNX15V9GYD0 113 aa10.94□□□□□ -0.66
LINC00339-207ENST00000634712 EPPK1P58107 5090 aaKnown RBP10.94□□□□□ -0.66
LINC00339-207ENST00000634712 PAGE4O60829 102 aa10.93□□□□□ -0.66
LINC00339-207ENST00000634712 PRO0255Q9UI72 69 aa10.93□□□□□ -0.66
LINC00339-207ENST00000634712 HHLA3Q9XRX5 114 aa10.93□□□□□ -0.66
LINC00339-207ENST00000634712 LINC00588Q9Y4M8 146 aa10.93□□□□□ -0.66
LINC00339-207ENST00000634712 MUC4Q99102 2169 aa10.93□□□□□ -0.66
LINC00339-207ENST00000634712 hCG_2014768A0A024R1R8 64 aa10.92□□□□□ -0.66
LINC00339-207ENST00000634712 FABP5P3A8MUU1 101 aa10.92□□□□□ -0.66
LINC00339-207ENST00000634712 LGALSLQ3ZCW2 172 aaPredicted RBP10.92□□□□□ -0.66
LINC00339-207ENST00000634712 FMC1Q96HJ9 113 aa10.92□□□□□ -0.66
LINC00339-207ENST00000634712 VSIG2Q96IQ7 327 aa10.92□□□□□ -0.66
LINC00339-207ENST00000634712 ZFP30Q9Y2G7 519 aa10.92□□□□□ -0.66
LINC00339-207ENST00000634712 C1QBP02746 253 aa10.91□□□□□ -0.66
LINC00339-207ENST00000634712 FHL2Q14192 279 aa10.91□□□□□ -0.66
LINC00339-207ENST00000634712 Q86TA4 180 aa10.91□□□□□ -0.66
LINC00339-207ENST00000634712 AKAP14Q86UN6 197 aa10.91□□□□□ -0.66
LINC00339-207ENST00000634712 OR4C5Q8NGB2 326 aa10.91□□□□□ -0.66
LINC00339-207ENST00000634712 ICOSQ9Y6W8 199 aa10.91□□□□□ -0.66
LINC00339-207ENST00000634712 DNAH10Q8IVF4 4471 aa10.91□□□□□ -0.66
LINC00339-207ENST00000634712 NACAE9PAV3 2078 aa10.91□□□□□ -0.66
LINC00339-207ENST00000634712 TRAV4A0A0B4J268 109 aa10.9□□□□□ -0.66
LINC00339-207ENST00000634712 C9JCJ5 164 aa10.9□□□□□ -0.66
LINC00339-207ENST00000634712 TEX46H3BTG2 121 aa10.9□□□□□ -0.66
LINC00339-207ENST00000634712 SFTA3P0C7M3 94 aa10.9□□□□□ -0.66
LINC00339-207ENST00000634712 AKR1C3P42330 323 aa10.9□□□□□ -0.66
LINC00339-207ENST00000634712 RAB5CP51148 216 aa10.9□□□□□ -0.66
LINC00339-207ENST00000634712 SOHLH1Q5JUK2 328 aa10.9□□□□□ -0.66
LINC00339-207ENST00000634712 LINC00336Q6ZUF6 198 aa10.9□□□□□ -0.66
LINC00339-207ENST00000634712 ZNRF2Q8NHG8 242 aa10.9□□□□□ -0.66
LINC00339-207ENST00000634712 ZNF479Q96JC4 524 aa10.9□□□□□ -0.66
LINC00339-207ENST00000634712 C11orf21Q9P2W6 132 aa10.9□□□□□ -0.66
LINC00339-207ENST00000634712 A0A096LPF7 62 aa10.9□□□□□ -0.67
LINC00339-207ENST00000634712 ORM1P02763 201 aa10.9□□□□□ -0.67
LINC00339-207ENST00000634712 S100A4P26447 101 aaKnown RBP10.9□□□□□ -0.67
LINC00339-207ENST00000634712 CRYBA4P53673 196 aa10.9□□□□□ -0.67
LINC00339-207ENST00000634712 ESRGQ1W209 222 aa10.9□□□□□ -0.67
LINC00339-207ENST00000634712 MRPL23Q16540 153 aaKnown RBP10.89□□□□□ -0.67
LINC00339-207ENST00000634712 ZNF876PQ49A33 203 aa10.89□□□□□ -0.67
LINC00339-207ENST00000634712 Q6ZR54 194 aa10.89□□□□□ -0.67
LINC00339-207ENST00000634712 SLC51BQ86UW2 128 aa10.89□□□□□ -0.67
LINC00339-207ENST00000634712 PCNPQ8WW12 178 aaKnown RBP10.89□□□□□ -0.67
LINC00339-207ENST00000634712 Q9H8V8 135 aa10.89□□□□□ -0.67
LINC00339-207ENST00000634712 FRAS1Q86XX4 4008 aa10.88□□□□□ -0.67
LINC00339-207ENST00000634712 S100A9P06702 114 aaKnown RBP10.88□□□□□ -0.67
LINC00339-207ENST00000634712 C1orf134Q5TEV5 83 aa10.88□□□□□ -0.67
LINC00339-207ENST00000634712 TRBV6-1A0A0K0K1D8 114 aa10.87□□□□□ -0.67
LINC00339-207ENST00000634712 NBDYA0A0U1RRE5 68 aa10.87□□□□□ -0.67
LINC00339-207ENST00000634712 B4DEV8 164 aa10.87□□□□□ -0.67
LINC00339-207ENST00000634712 ASIPP42127 132 aa10.87□□□□□ -0.67
LINC00339-207ENST00000634712 FAM162BQ5T6X4 162 aa10.87□□□□□ -0.67
LINC00339-207ENST00000634712 ZC2HC1AQ96GY0 325 aa10.87□□□□□ -0.67
LINC00339-207ENST00000634712 MANBALQ9NQG1 85 aa10.87□□□□□ -0.67
LINC00339-207ENST00000634712 GNG13Q9P2W3 67 aa10.87□□□□□ -0.67
LINC00339-207ENST00000634712 IGKV3D-20A0A0C4DH25 116 aa10.86□□□□□ -0.67
LINC00339-207ENST00000634712 LTAP01374 205 aa10.86□□□□□ -0.67
LINC00339-207ENST00000634712 SULT1A2P50226 295 aa10.86□□□□□ -0.67
LINC00339-207ENST00000634712 C9orf85Q96MD7 179 aa10.86□□□□□ -0.67
LINC00339-207ENST00000634712 MRPS16Q9Y3D3 137 aaKnown RBP10.86□□□□□ -0.67
LINC00339-207ENST00000634712 SCO2A0A1W2PP80 73 aa10.85□□□□□ -0.67
LINC00339-207ENST00000634712 PRSS29PA6NIE9 313 aa10.85□□□□□ -0.67
LINC00339-207ENST00000634712 M0R036 132 aa10.85□□□□□ -0.67
LINC00339-207ENST00000634712 CIDEAO60543 219 aa10.85□□□□□ -0.67
LINC00339-207ENST00000634712 SH2D1AO60880 128 aa10.85□□□□□ -0.67
LINC00339-207ENST00000634712 RNASE3P12724 160 aaKnown RBP10.85□□□□□ -0.67
LINC00339-207ENST00000634712 GYPEP15421 78 aa10.85□□□□□ -0.67
LINC00339-207ENST00000634712 SRIP30626 198 aa10.85□□□□□ -0.67
LINC00339-207ENST00000634712 NEGR1Q7Z3B1 354 aa10.85□□□□□ -0.67
LINC00339-207ENST00000634712 COX8CQ7Z4L0 72 aa10.85□□□□□ -0.67
LINC00339-207ENST00000634712 UPK3BQ9BT76 320 aa10.85□□□□□ -0.67
LINC00339-207ENST00000634712 TRAV1-1A0A0B4J248 108 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms