RNA–Protein interactions for RNA: ENST00000629179.1

PNKP-223, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-223ENST00000629179 LINC00588Q9Y4M8 146 aa9.88□□□□□ -0.83
PNKP-223ENST00000629179 IGHV3-16A0A0C4DH30 117 aa9.87□□□□□ -0.83
PNKP-223ENST00000629179 H3BNG1 76 aa9.87□□□□□ -0.83
PNKP-223ENST00000629179 GCGP01275 180 aa9.87□□□□□ -0.83
PNKP-223ENST00000629179 TYMSP04818 313 aa9.87□□□□□ -0.83
PNKP-223ENST00000629179 SEC11BP0C7V7 166 aa9.87□□□□□ -0.83
PNKP-223ENST00000629179 FAM3BP58499 235 aaPredicted RBP9.87□□□□□ -0.83
PNKP-223ENST00000629179 TMUB2Q71RG4 321 aa9.87□□□□□ -0.83
PNKP-223ENST00000629179 C11orf21Q9P2W6 132 aa9.87□□□□□ -0.83
PNKP-223ENST00000629179 PEX7O00628 323 aa9.86□□□□□ -0.83
PNKP-223ENST00000629179 SMUG1Q53HV7 270 aa9.86□□□□□ -0.83
PNKP-223ENST00000629179 ZNRF2Q8NHG8 242 aa9.86□□□□□ -0.83
PNKP-223ENST00000629179 STOML3Q8TAV4 291 aa9.86□□□□□ -0.83
PNKP-223ENST00000629179 FAM213BQ8TBF2 198 aa9.86□□□□□ -0.83
PNKP-223ENST00000629179 RASL10AQ92737 203 aa9.86□□□□□ -0.83
PNKP-223ENST00000629179 KCNS1Q96KK3 526 aa9.86□□□□□ -0.83
PNKP-223ENST00000629179 NKX6-2Q9C056 277 aaPredicted RBP9.86□□□□□ -0.83
PNKP-223ENST00000629179 SDF2L1Q9HCN8 221 aa9.86□□□□□ -0.83
PNKP-223ENST00000629179 A0A096LPF7 62 aa9.85□□□□□ -0.83
PNKP-223ENST00000629179 FBLL1A6NHQ2 334 aaKnown RBP9.85□□□□□ -0.83
PNKP-223ENST00000629179 RTL8CO15255 209 aa9.85□□□□□ -0.83
PNKP-223ENST00000629179 PAX4O43316 350 aa9.85□□□□□ -0.83
PNKP-223ENST00000629179 SFTA3P0C7M3 94 aa9.85□□□□□ -0.83
PNKP-223ENST00000629179 FHL2Q14192 279 aa9.85□□□□□ -0.83
PNKP-223ENST00000629179 ESRGQ1W209 222 aa9.85□□□□□ -0.83
PNKP-223ENST00000629179 SAPCD1Q5SSQ6 148 aa9.85□□□□□ -0.83
PNKP-223ENST00000629179 SFT2D1Q8WV19 159 aa9.85□□□□□ -0.83
PNKP-223ENST00000629179 ARL2-SNX15V9GYD0 113 aa9.85□□□□□ -0.83
PNKP-223ENST00000629179 A0A1B0GV50 99 aa9.84□□□□□ -0.83
PNKP-223ENST00000629179 UMAD1C9J7I0 102 aa9.84□□□□□ -0.83
PNKP-223ENST00000629179 M0R2P5 195 aa9.84□□□□□ -0.83
PNKP-223ENST00000629179 PFN1P07737 140 aaKnown RBP9.84□□□□□ -0.83
PNKP-223ENST00000629179 PPT1P50897 306 aa9.84□□□□□ -0.83
PNKP-223ENST00000629179 ZFP69Q49AA0 526 aa9.84□□□□□ -0.83
PNKP-223ENST00000629179 CST9LP1Q5W188 147 aa9.84□□□□□ -0.83
PNKP-223ENST00000629179 MBD3L1Q8WWY6 194 aa9.84□□□□□ -0.83
PNKP-223ENST00000629179 HIST1H2BAQ96A08 127 aa9.84□□□□□ -0.83
PNKP-223ENST00000629179 ZNF479Q96JC4 524 aa9.84□□□□□ -0.83
PNKP-223ENST00000629179 TRGV4A0A0C4DH28 118 aa9.83□□□□□ -0.84
PNKP-223ENST00000629179 PAGE4O60829 102 aa9.83□□□□□ -0.84
PNKP-223ENST00000629179 CRYBA4P53673 196 aa9.83□□□□□ -0.84
PNKP-223ENST00000629179 EIF5AP63241 154 aaKnown RBP9.83□□□□□ -0.84
PNKP-223ENST00000629179 LGALSLQ3ZCW2 172 aaPredicted RBP9.83□□□□□ -0.84
PNKP-223ENST00000629179 LINC00336Q6ZUF6 198 aa9.83□□□□□ -0.84
PNKP-223ENST00000629179 Q86TA4 180 aa9.83□□□□□ -0.84
PNKP-223ENST00000629179 PRO0255Q9UI72 69 aa9.83□□□□□ -0.84
PNKP-223ENST00000629179 HHLA3Q9XRX5 114 aa9.83□□□□□ -0.84
PNKP-223ENST00000629179 BIRC6Q9NR09 4857 aa9.83□□□□□ -0.84
PNKP-223ENST00000629179 NBDYA0A0U1RRE5 68 aa9.82□□□□□ -0.84
PNKP-223ENST00000629179 TPT1P13693 172 aaKnown RBP9.82□□□□□ -0.84
PNKP-223ENST00000629179 TCTE3Q8IZS6 198 aa9.82□□□□□ -0.84
PNKP-223ENST00000629179 Q9H8V8 135 aa9.82□□□□□ -0.84
PNKP-223ENST00000629179 TRAV4A0A0B4J268 109 aa9.81□□□□□ -0.84
PNKP-223ENST00000629179 C9JCJ5 164 aa9.81□□□□□ -0.84
PNKP-223ENST00000629179 H2AFB1P0C5Y9 115 aa9.81□□□□□ -0.84
PNKP-223ENST00000629179 SLAQ13239 276 aa9.81□□□□□ -0.84
PNKP-223ENST00000629179 C1orf134Q5TEV5 83 aa9.81□□□□□ -0.84
PNKP-223ENST00000629179 DPPA3Q6W0C5 159 aa9.81□□□□□ -0.84
PNKP-223ENST00000629179 OR4C5Q8NGB2 326 aa9.81□□□□□ -0.84
PNKP-223ENST00000629179 ICOSQ9Y6W8 199 aa9.81□□□□□ -0.84
PNKP-223ENST00000629179 IGKV3D-20A0A0C4DH25 116 aa9.8□□□□□ -0.84
PNKP-223ENST00000629179 PRSS29PA6NIE9 313 aa9.8□□□□□ -0.84
PNKP-223ENST00000629179 FABP5P3A8MUU1 101 aa9.8□□□□□ -0.84
PNKP-223ENST00000629179 UBE2G1P62253 170 aa9.8□□□□□ -0.84
PNKP-223ENST00000629179 ZC2HC1AQ96GY0 325 aa9.8□□□□□ -0.84
PNKP-223ENST00000629179 FMC1Q96HJ9 113 aa9.8□□□□□ -0.84
PNKP-223ENST00000629179 C9orf85Q96MD7 179 aa9.8□□□□□ -0.84
PNKP-223ENST00000629179 MRPS16Q9Y3D3 137 aaKnown RBP9.8□□□□□ -0.84
PNKP-223ENST00000629179 C1QBP02746 253 aa9.79□□□□□ -0.84
PNKP-223ENST00000629179 RNASE3P12724 160 aaKnown RBP9.79□□□□□ -0.84
PNKP-223ENST00000629179 AKR1C3P42330 323 aa9.79□□□□□ -0.84
PNKP-223ENST00000629179 CRIP1P50238 77 aa9.79□□□□□ -0.84
PNKP-223ENST00000629179 MRPL23Q16540 153 aaKnown RBP9.79□□□□□ -0.84
PNKP-223ENST00000629179 ZNF876PQ49A33 203 aa9.79□□□□□ -0.84
PNKP-223ENST00000629179 AKAP14Q86UN6 197 aa9.79□□□□□ -0.84
PNKP-223ENST00000629179 TCEAL7Q9BRU2 100 aa9.79□□□□□ -0.84
PNKP-223ENST00000629179 UPK3BQ9BT76 320 aa9.79□□□□□ -0.84
PNKP-223ENST00000629179 ZFP30Q9Y2G7 519 aa9.79□□□□□ -0.84
PNKP-223ENST00000629179 A0A1B0GVY2 172 aa9.78□□□□□ -0.84
PNKP-223ENST00000629179 PGPEP1LA6NFU8 196 aa9.78□□□□□ -0.84
PNKP-223ENST00000629179 ORM1P02763 201 aa9.78□□□□□ -0.84
PNKP-223ENST00000629179 CCL20P78556 96 aa9.78□□□□□ -0.84
PNKP-223ENST00000629179 SOHLH1Q5JUK2 328 aa9.78□□□□□ -0.84
PNKP-223ENST00000629179 TRBV6-1A0A0K0K1D8 114 aa9.77□□□□□ -0.85
PNKP-223ENST00000629179 SCO2A0A1W2PP80 73 aa9.77□□□□□ -0.85
PNKP-223ENST00000629179 K7EQD1 137 aa9.77□□□□□ -0.85
PNKP-223ENST00000629179 RS1O15537 224 aa9.77□□□□□ -0.85
PNKP-223ENST00000629179 SH2D1AO60880 128 aa9.77□□□□□ -0.85
PNKP-223ENST00000629179 LTAP01374 205 aa9.77□□□□□ -0.85
PNKP-223ENST00000629179 GYPEP15421 78 aa9.77□□□□□ -0.85
PNKP-223ENST00000629179 ZNF506Q5JVG8 444 aa9.77□□□□□ -0.85
PNKP-223ENST00000629179 COX8CQ7Z4L0 72 aa9.77□□□□□ -0.85
PNKP-223ENST00000629179 KRTAP1-5Q9BYS1 174 aa9.77□□□□□ -0.85
PNKP-223ENST00000629179 DNAH17Q9UFH2 4485 aa9.77□□□□□ -0.85
PNKP-223ENST00000629179 LOC100131303A0A0U1RQF7 123 aa9.76□□□□□ -0.85
PNKP-223ENST00000629179 B4DEV8 164 aa9.76□□□□□ -0.85
PNKP-223ENST00000629179 M0R036 132 aa9.76□□□□□ -0.85
PNKP-223ENST00000629179 S100A4P26447 101 aaKnown RBP9.76□□□□□ -0.85
PNKP-223ENST00000629179 FAM162BQ5T6X4 162 aa9.76□□□□□ -0.85
PNKP-223ENST00000629179 CFAP126Q5VTH2 177 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms