RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 RPL35AP18077 110 aaKnown RBP9.51□□□□□ -0.89
SYNGAP1-207ENST00000628646 CKS2P33552 79 aa9.5□□□□□ -0.89
SYNGAP1-207ENST00000628646 NUTF2P61970 127 aaKnown RBP9.5□□□□□ -0.89
SYNGAP1-207ENST00000628646 SLAQ13239 276 aa9.5□□□□□ -0.89
SYNGAP1-207ENST00000628646 TDRG1Q3Y452 100 aa9.5□□□□□ -0.89
SYNGAP1-207ENST00000628646 SPANXN1Q5VSR9 72 aa9.5□□□□□ -0.89
SYNGAP1-207ENST00000628646 RIPPLY3P57055 190 aa9.5□□□□□ -0.89
SYNGAP1-207ENST00000628646 C19orf71A6NCJ1 209 aa9.5□□□□□ -0.89
SYNGAP1-207ENST00000628646 MRPS12O15235 138 aaKnown RBP9.5□□□□□ -0.89
SYNGAP1-207ENST00000628646 Q8N2B8 174 aa9.5□□□□□ -0.89
SYNGAP1-207ENST00000628646 A0A1B0GXF2 115 aa9.49□□□□□ -0.89
SYNGAP1-207ENST00000628646 F8W735 103 aaPredicted RBP9.49□□□□□ -0.89
SYNGAP1-207ENST00000628646 ZNF324O75467 553 aaPredicted RBP9.49□□□□□ -0.89
SYNGAP1-207ENST00000628646 LEPROTL1O95214 131 aa9.49□□□□□ -0.89
SYNGAP1-207ENST00000628646 CRIP2P52943 208 aaPredicted RBP9.49□□□□□ -0.89
SYNGAP1-207ENST00000628646 IGLL1P15814 213 aa9.49□□□□□ -0.89
SYNGAP1-207ENST00000628646 BATFQ16520 125 aa9.49□□□□□ -0.89
SYNGAP1-207ENST00000628646 C16orf54Q6UWD8 224 aa9.49□□□□□ -0.89
SYNGAP1-207ENST00000628646 ZNF138P52744 262 aa9.48□□□□□ -0.89
SYNGAP1-207ENST00000628646 TEX43Q6ZNM6 134 aa9.48□□□□□ -0.89
SYNGAP1-207ENST00000628646 CHCHD1Q96BP2 118 aaKnown RBP9.48□□□□□ -0.89
SYNGAP1-207ENST00000628646 IGKV2-40A0A087WW87 121 aaPredicted RBP9.48□□□□□ -0.89
SYNGAP1-207ENST00000628646 IGKV2D-40P01614 121 aaPredicted RBP9.48□□□□□ -0.89
SYNGAP1-207ENST00000628646 CD300EQ496F6 205 aaPredicted RBP9.48□□□□□ -0.89
SYNGAP1-207ENST00000628646 NDUFAF3Q9BU61 184 aa9.48□□□□□ -0.89
SYNGAP1-207ENST00000628646 FOXA3P55318 350 aaPredicted RBP9.48□□□□□ -0.89
SYNGAP1-207ENST00000628646 AP5S1Q9NUS5 200 aa9.48□□□□□ -0.89
SYNGAP1-207ENST00000628646 GPX1P07203 203 aa9.48□□□□□ -0.89
SYNGAP1-207ENST00000628646 PRIMA1Q86XR5 153 aa9.48□□□□□ -0.89
SYNGAP1-207ENST00000628646 OR10AG1Q8NH19 301 aa9.48□□□□□ -0.89
SYNGAP1-207ENST00000628646 LINC00477Q96M19 166 aa9.48□□□□□ -0.89
SYNGAP1-207ENST00000628646 NPIPB6E9PJ23 425 aa9.47□□□□□ -0.89
SYNGAP1-207ENST00000628646 GTSF1Q8WW33 167 aa9.47□□□□□ -0.89
SYNGAP1-207ENST00000628646 PDZD2O15018 2839 aa9.47□□□□□ -0.89
SYNGAP1-207ENST00000628646 H0Y8G0 127 aa9.47□□□□□ -0.89
SYNGAP1-207ENST00000628646 APOHP02749 345 aaPredicted RBP9.47□□□□□ -0.89
SYNGAP1-207ENST00000628646 PPBPP02775 128 aa9.47□□□□□ -0.89
SYNGAP1-207ENST00000628646 TSPOP30536 169 aa9.47□□□□□ -0.89
SYNGAP1-207ENST00000628646 TMEM61Q8N0U2 210 aa9.47□□□□□ -0.89
SYNGAP1-207ENST00000628646 RNF182Q8N6D2 247 aa9.47□□□□□ -0.89
SYNGAP1-207ENST00000628646 MRPL53Q96EL3 112 aaKnown RBP9.47□□□□□ -0.89
SYNGAP1-207ENST00000628646 MAP1LC3AQ9H492 121 aa9.47□□□□□ -0.89
SYNGAP1-207ENST00000628646 CMC4P56277 68 aaPredicted RBP9.47□□□□□ -0.89
SYNGAP1-207ENST00000628646 ORMDL3Q8N138 153 aa9.47□□□□□ -0.89
SYNGAP1-207ENST00000628646 SSBP4Q9BWG4 385 aaPredicted RBP9.47□□□□□ -0.89
SYNGAP1-207ENST00000628646 M0R143 59 aa9.46□□□□□ -0.89
SYNGAP1-207ENST00000628646 SH2D1AO60880 128 aa9.46□□□□□ -0.89
SYNGAP1-207ENST00000628646 IGLC2P0DOY2 106 aa9.46□□□□□ -0.89
SYNGAP1-207ENST00000628646 HNRNPA3P51991 378 aaKnown RBP9.46□□□□□ -0.89
SYNGAP1-207ENST00000628646 LBHQ53QV2 105 aaPredicted RBP9.46□□□□□ -0.89
SYNGAP1-207ENST00000628646 PAM16Q9Y3D7 125 aa9.46□□□□□ -0.89
SYNGAP1-207ENST00000628646 CBY3A6NI87 242 aa9.46□□□□□ -0.89
SYNGAP1-207ENST00000628646 BTF3P20290 206 aaKnown RBP9.46□□□□□ -0.89
SYNGAP1-207ENST00000628646 NIT1Q86X76 327 aa9.46□□□□□ -0.89
SYNGAP1-207ENST00000628646 URB1-AS1Q96HZ7 61 aa9.46□□□□□ -0.89
SYNGAP1-207ENST00000628646 PRELID3AQ96N28 172 aa9.46□□□□□ -0.89
SYNGAP1-207ENST00000628646 NBPF19A0A087WUL8 3843 aa9.46□□□□□ -0.9
SYNGAP1-207ENST00000628646 K7EMT4 169 aa9.46□□□□□ -0.9
SYNGAP1-207ENST00000628646 PRR25Q96S07 402 aa9.46□□□□□ -0.9
SYNGAP1-207ENST00000628646 TCAPO15273 167 aa9.45□□□□□ -0.9
SYNGAP1-207ENST00000628646 BUB3O43684 328 aa9.45□□□□□ -0.9
SYNGAP1-207ENST00000628646 ZNF580Q9UK33 172 aa9.45□□□□□ -0.9
SYNGAP1-207ENST00000628646 TRAV21A0A0B4J279 112 aa9.45□□□□□ -0.9
SYNGAP1-207ENST00000628646 LINC00614P0C842 121 aa9.45□□□□□ -0.9
SYNGAP1-207ENST00000628646 FXYD7P58549 80 aa9.45□□□□□ -0.9
SYNGAP1-207ENST00000628646 C18orf32Q8TCD1 76 aa9.45□□□□□ -0.9
SYNGAP1-207ENST00000628646 C17orf77Q96MU5 243 aa9.45□□□□□ -0.9
SYNGAP1-207ENST00000628646 C2orf88Q9BSF0 95 aa9.45□□□□□ -0.9
SYNGAP1-207ENST00000628646 TMEM70Q9BUB7 260 aa9.45□□□□□ -0.9
SYNGAP1-207ENST00000628646 MS4A6AQ9H2W1 248 aa9.45□□□□□ -0.9
SYNGAP1-207ENST00000628646 CACNG7P62955 275 aa9.45□□□□□ -0.9
SYNGAP1-207ENST00000628646 ZNF747Q9BV97 191 aa9.45□□□□□ -0.9
SYNGAP1-207ENST00000628646 OXLD1Q5BKU9 147 aa9.45□□□□□ -0.9
SYNGAP1-207ENST00000628646 MRAPQ8TCY5 172 aa9.45□□□□□ -0.9
SYNGAP1-207ENST00000628646 TMEM213A2RRL7 107 aa9.44□□□□□ -0.9
SYNGAP1-207ENST00000628646 RBAKDNA6NC62 111 aa9.44□□□□□ -0.9
SYNGAP1-207ENST00000628646 DUSP14O95147 198 aaKnown RBP9.44□□□□□ -0.9
SYNGAP1-207ENST00000628646 KLF5Q13887 457 aaPredicted RBP9.44□□□□□ -0.9
SYNGAP1-207ENST00000628646 SPAG8Q99932 426 aaPredicted RBP9.44□□□□□ -0.9
SYNGAP1-207ENST00000628646 PHLDA3Q9Y5J5 127 aa9.44□□□□□ -0.9
SYNGAP1-207ENST00000628646 EREGO14944 169 aa9.44□□□□□ -0.9
SYNGAP1-207ENST00000628646 INSL3P51460 131 aa9.44□□□□□ -0.9
SYNGAP1-207ENST00000628646 CFHR3Q02985 330 aa9.44□□□□□ -0.9
SYNGAP1-207ENST00000628646 CSMD2Q7Z408 3487 aa9.44□□□□□ -0.9
SYNGAP1-207ENST00000628646 LYZL1Q6UWQ5 148 aa9.43□□□□□ -0.9
SYNGAP1-207ENST00000628646 ZC2HC1AQ96GY0 325 aa9.43□□□□□ -0.9
SYNGAP1-207ENST00000628646 KNCNA6PVL3 124 aa9.43□□□□□ -0.9
SYNGAP1-207ENST00000628646 CTRLP40313 264 aa9.43□□□□□ -0.9
SYNGAP1-207ENST00000628646 ASIPP42127 132 aa9.43□□□□□ -0.9
SYNGAP1-207ENST00000628646 ALKBH7Q9BT30 221 aaPredicted RBP9.43□□□□□ -0.9
SYNGAP1-207ENST00000628646 LOC389332A0A1B0GUA5 103 aa9.43□□□□□ -0.9
SYNGAP1-207ENST00000628646 APRG1Q8IVJ8 170 aa9.43□□□□□ -0.9
SYNGAP1-207ENST00000628646 AP1S3Q96PC3 154 aa9.43□□□□□ -0.9
SYNGAP1-207ENST00000628646 UQCR10Q9UDW1 63 aa9.43□□□□□ -0.9
SYNGAP1-207ENST00000628646 LOC102724200A0A096LPH7 203 aaPredicted RBP9.42□□□□□ -0.9
SYNGAP1-207ENST00000628646 PPP1R17O96001 155 aa9.42□□□□□ -0.9
SYNGAP1-207ENST00000628646 EMP1P54849 157 aa9.42□□□□□ -0.9
SYNGAP1-207ENST00000628646 DMRTA1Q5VZB9 504 aa9.42□□□□□ -0.9
SYNGAP1-207ENST00000628646 FAM19A2Q8N3H0 131 aa9.42□□□□□ -0.9
SYNGAP1-207ENST00000628646 LENEPQ9Y5L5 61 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms