RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 IQCF2Q8IXL9 164 aa11.85□□□□□ -0.51
SPTAN1-214ENST00000628614 SDF2L1Q9HCN8 221 aa11.85□□□□□ -0.51
SPTAN1-214ENST00000628614 IGHV3-16A0A0C4DH30 117 aa11.84□□□□□ -0.51
SPTAN1-214ENST00000628614 FBLL1A6NHQ2 334 aaKnown RBP11.84□□□□□ -0.51
SPTAN1-214ENST00000628614 GGTLC3B5MD39 225 aa11.84□□□□□ -0.51
SPTAN1-214ENST00000628614 M0R2P5 195 aa11.84□□□□□ -0.51
SPTAN1-214ENST00000628614 GNRH2O43555 120 aa11.84□□□□□ -0.51
SPTAN1-214ENST00000628614 TYMSP04818 313 aa11.84□□□□□ -0.51
SPTAN1-214ENST00000628614 BTF3P20290 206 aaKnown RBP11.84□□□□□ -0.51
SPTAN1-214ENST00000628614 SUMO1P63165 101 aaKnown RBP11.84□□□□□ -0.51
SPTAN1-214ENST00000628614 SGK494Q96LW2 274 aa11.84□□□□□ -0.51
SPTAN1-214ENST00000628614 KRTAP1-5Q9BYS1 174 aa11.84□□□□□ -0.51
SPTAN1-214ENST00000628614 EPDR1Q9UM22 224 aa11.84□□□□□ -0.51
SPTAN1-214ENST00000628614 TRAV4A0A0B4J268 109 aa11.83□□□□□ -0.52
SPTAN1-214ENST00000628614 CTXND1A0A1B0GTU2 59 aa11.83□□□□□ -0.52
SPTAN1-214ENST00000628614 A0A1W2PRE2 83 aa11.83□□□□□ -0.52
SPTAN1-214ENST00000628614 TAAR5O14804 337 aa11.83□□□□□ -0.52
SPTAN1-214ENST00000628614 SFTA3P0C7M3 94 aa11.83□□□□□ -0.52
SPTAN1-214ENST00000628614 ZFP69Q49AA0 526 aa11.83□□□□□ -0.52
SPTAN1-214ENST00000628614 CYB561D1Q8N8Q1 229 aa11.83□□□□□ -0.52
SPTAN1-214ENST00000628614 ZNF479Q96JC4 524 aa11.83□□□□□ -0.52
SPTAN1-214ENST00000628614 PSG8Q9UQ74 426 aa11.83□□□□□ -0.52
SPTAN1-214ENST00000628614 SIVA1O15304 175 aa11.82□□□□□ -0.52
SPTAN1-214ENST00000628614 FLI1Q01543 452 aaPredicted RBP11.82□□□□□ -0.52
SPTAN1-214ENST00000628614 AKR1C8PQ5T2L2 129 aa11.82□□□□□ -0.52
SPTAN1-214ENST00000628614 NEGR1Q7Z3B1 354 aa11.82□□□□□ -0.52
SPTAN1-214ENST00000628614 TMEM75Q8N9X5 138 aa11.82□□□□□ -0.52
SPTAN1-214ENST00000628614 PCNPQ8WW12 178 aaKnown RBP11.82□□□□□ -0.52
SPTAN1-214ENST00000628614 G3V3Q6 166 aa11.81□□□□□ -0.52
SPTAN1-214ENST00000628614 NXPH4O95158 308 aa11.81□□□□□ -0.52
SPTAN1-214ENST00000628614 GCGP01275 180 aa11.81□□□□□ -0.52
SPTAN1-214ENST00000628614 IGLV2-11P01706 119 aa11.81□□□□□ -0.52
SPTAN1-214ENST00000628614 ORM1P02763 201 aa11.81□□□□□ -0.52
SPTAN1-214ENST00000628614 SRIP30626 198 aa11.81□□□□□ -0.52
SPTAN1-214ENST00000628614 ZNF726P1Q15940 193 aa11.81□□□□□ -0.52
SPTAN1-214ENST00000628614 SMUG1Q53HV7 270 aa11.81□□□□□ -0.52
SPTAN1-214ENST00000628614 ZNF575Q86XF7 245 aa11.81□□□□□ -0.52
SPTAN1-214ENST00000628614 OR4C5Q8NGB2 326 aa11.81□□□□□ -0.52
SPTAN1-214ENST00000628614 C9JCJ5 164 aa11.8□□□□□ -0.52
SPTAN1-214ENST00000628614 K7EQD1 137 aa11.8□□□□□ -0.52
SPTAN1-214ENST00000628614 ARPC5O15511 151 aa11.8□□□□□ -0.52
SPTAN1-214ENST00000628614 PFN1P07737 140 aaKnown RBP11.8□□□□□ -0.52
SPTAN1-214ENST00000628614 SAPCD1Q5SSQ6 148 aa11.8□□□□□ -0.52
SPTAN1-214ENST00000628614 PRNTQ86SH4 94 aa11.8□□□□□ -0.52
SPTAN1-214ENST00000628614 GYPEP15421 78 aa11.79□□□□□ -0.52
SPTAN1-214ENST00000628614 PPT1P50897 306 aa11.79□□□□□ -0.52
SPTAN1-214ENST00000628614 ZNF80P51504 273 aaPredicted RBP11.79□□□□□ -0.52
SPTAN1-214ENST00000628614 LYPD5Q6UWN5 251 aa11.79□□□□□ -0.52
SPTAN1-214ENST00000628614 NKX6-2Q9C056 277 aaPredicted RBP11.79□□□□□ -0.52
SPTAN1-214ENST00000628614 LRP1BQ9NZR2 4599 aa11.79□□□□□ -0.52
SPTAN1-214ENST00000628614 IFNA7P01567 189 aa11.78□□□□□ -0.52
SPTAN1-214ENST00000628614 TXNDC17Q9BRA2 123 aa11.78□□□□□ -0.52
SPTAN1-214ENST00000628614 C11orf21Q9P2W6 132 aa11.78□□□□□ -0.52
SPTAN1-214ENST00000628614 C16orf90A8MZG2 172 aa11.77□□□□□ -0.53
SPTAN1-214ENST00000628614 LINC00315P59091 139 aa11.77□□□□□ -0.53
SPTAN1-214ENST00000628614 UBE2G2P60604 165 aa11.77□□□□□ -0.53
SPTAN1-214ENST00000628614 ZNF876PQ49A33 203 aa11.77□□□□□ -0.53
SPTAN1-214ENST00000628614 CYTL1Q9NRR1 136 aa11.77□□□□□ -0.53
SPTAN1-214ENST00000628614 MAP1LC3B2A6NCE7 125 aa11.76□□□□□ -0.53
SPTAN1-214ENST00000628614 FAM74A7A6NL05 159 aa11.76□□□□□ -0.53
SPTAN1-214ENST00000628614 PEX7O00628 323 aa11.76□□□□□ -0.53
SPTAN1-214ENST00000628614 CIDEAO60543 219 aa11.76□□□□□ -0.53
SPTAN1-214ENST00000628614 FGF8P55075 233 aaPredicted RBP11.76□□□□□ -0.53
SPTAN1-214ENST00000628614 HIST1H2BAQ96A08 127 aa11.76□□□□□ -0.53
SPTAN1-214ENST00000628614 C9orf85Q96MD7 179 aa11.76□□□□□ -0.53
SPTAN1-214ENST00000628614 MAP1LC3BQ9GZQ8 125 aa11.76□□□□□ -0.53
SPTAN1-214ENST00000628614 ARL2-SNX15V9GYD0 113 aa11.76□□□□□ -0.53
SPTAN1-214ENST00000628614 TRAV34A0A0B4J273 112 aa11.75□□□□□ -0.53
SPTAN1-214ENST00000628614 GATA1P15976 413 aaPredicted RBP11.75□□□□□ -0.53
SPTAN1-214ENST00000628614 ZNF345Q14585 488 aa11.75□□□□□ -0.53
SPTAN1-214ENST00000628614 SH2D6Q7Z4S9 175 aa11.75□□□□□ -0.53
SPTAN1-214ENST00000628614 LINC00479Q96M42 142 aa11.75□□□□□ -0.53
SPTAN1-214ENST00000628614 TRAV9-2A0A087WT02 112 aa11.74□□□□□ -0.53
SPTAN1-214ENST00000628614 SMLR1H3BR10 107 aa11.74□□□□□ -0.53
SPTAN1-214ENST00000628614 Q86TA4 180 aa11.74□□□□□ -0.53
SPTAN1-214ENST00000628614 STOML3Q8TAV4 291 aa11.74□□□□□ -0.53
SPTAN1-214ENST00000628614 PTH2Q96A98 100 aa11.74□□□□□ -0.53
SPTAN1-214ENST00000628614 LY96Q9Y6Y9 160 aa11.74□□□□□ -0.53
SPTAN1-214ENST00000628614 K7EP13 123 aa11.73□□□□□ -0.53
SPTAN1-214ENST00000628614 RS1O15537 224 aa11.73□□□□□ -0.53
SPTAN1-214ENST00000628614 HSPG2P98160 4391 aa11.73□□□□□ -0.53
SPTAN1-214ENST00000628614 CFAP126Q5VTH2 177 aa11.73□□□□□ -0.53
SPTAN1-214ENST00000628614 KCNRGQ8N5I3 272 aa11.73□□□□□ -0.53
SPTAN1-214ENST00000628614 NHLRC2Q8NBF2 726 aa11.73□□□□□ -0.53
SPTAN1-214ENST00000628614 LOC100131303A0A0U1RQF7 123 aa11.72□□□□□ -0.53
SPTAN1-214ENST00000628614 FABP5P3A8MUU1 101 aa11.72□□□□□ -0.53
SPTAN1-214ENST00000628614 RNASE3P12724 160 aaKnown RBP11.72□□□□□ -0.53
SPTAN1-214ENST00000628614 ZNF506Q5JVG8 444 aa11.72□□□□□ -0.53
SPTAN1-214ENST00000628614 SPATA12Q7Z6I5 190 aa11.72□□□□□ -0.53
SPTAN1-214ENST00000628614 TCEAL7Q9BRU2 100 aa11.72□□□□□ -0.53
SPTAN1-214ENST00000628614 PRADC1Q9BSG0 188 aa11.72□□□□□ -0.53
SPTAN1-214ENST00000628614 HMSDA8MTL9 139 aa11.71□□□□□ -0.53
SPTAN1-214ENST00000628614 EVI2AP22794 236 aa11.71□□□□□ -0.53
SPTAN1-214ENST00000628614 S100A4P26447 101 aaKnown RBP11.71□□□□□ -0.53
SPTAN1-214ENST00000628614 FHITP49789 147 aa11.71□□□□□ -0.53
SPTAN1-214ENST00000628614 TIRAPP58753 221 aa11.71□□□□□ -0.53
SPTAN1-214ENST00000628614 RHOHQ15669 191 aa11.71□□□□□ -0.53
SPTAN1-214ENST00000628614 DPPA3Q6W0C5 159 aa11.71□□□□□ -0.53
SPTAN1-214ENST00000628614 Q6ZRN7 208 aaPredicted RBP11.71□□□□□ -0.53
SPTAN1-214ENST00000628614 NFE4Q86UQ8 179 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms