RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 KCNS1Q96KK3 526 aa8.67□□□□□ -1.02
LINC00963-220ENST00000625171 A0A1B0GXF2 115 aa8.66□□□□□ -1.02
LINC00963-220ENST00000625171 CRXO43186 299 aaPredicted RBP8.66□□□□□ -1.02
LINC00963-220ENST00000625171 OR5AL1P0C617 328 aa8.66□□□□□ -1.02
LINC00963-220ENST00000625171 GATD1Q8NB37 220 aa8.66□□□□□ -1.02
LINC00963-220ENST00000625171 GNB1LQ9BYB4 327 aa8.66□□□□□ -1.02
LINC00963-220ENST00000625171 C11orf21Q9P2W6 132 aa8.66□□□□□ -1.02
LINC00963-220ENST00000625171 IGHV4-4A0A075B6R2 117 aa8.65□□□□□ -1.02
LINC00963-220ENST00000625171 KNCNA6PVL3 124 aa8.65□□□□□ -1.02
LINC00963-220ENST00000625171 SNAI2O43623 268 aa8.65□□□□□ -1.02
LINC00963-220ENST00000625171 CA1P00915 261 aaPredicted RBP8.65□□□□□ -1.02
LINC00963-220ENST00000625171 ORM1P02763 201 aa8.65□□□□□ -1.02
LINC00963-220ENST00000625171 MT-ND6P03923 174 aa8.65□□□□□ -1.02
LINC00963-220ENST00000625171 CD7P09564 240 aa8.65□□□□□ -1.02
LINC00963-220ENST00000625171 PRB4P10163 310 aaPredicted RBP8.65□□□□□ -1.02
LINC00963-220ENST00000625171 RNASE4P34096 147 aaKnown RBP8.65□□□□□ -1.02
LINC00963-220ENST00000625171 CTRLP40313 264 aa8.65□□□□□ -1.02
LINC00963-220ENST00000625171 MORN3Q6PF18 240 aaPredicted RBP8.65□□□□□ -1.02
LINC00963-220ENST00000625171 STHQ8IWL8 128 aa8.65□□□□□ -1.02
LINC00963-220ENST00000625171 A0A1B0GUT8 65 aa8.64□□□□□ -1.03
LINC00963-220ENST00000625171 RBMY1BA6NDE4 496 aaKnown RBP8.64□□□□□ -1.03
LINC00963-220ENST00000625171 RBMY1EA6NEQ0 496 aaKnown RBP8.64□□□□□ -1.03
LINC00963-220ENST00000625171 PHOX2AO14813 284 aa8.64□□□□□ -1.03
LINC00963-220ENST00000625171 S100A8P05109 93 aa8.64□□□□□ -1.03
LINC00963-220ENST00000625171 RBMY1DP0C7P1 496 aaKnown RBP8.64□□□□□ -1.03
LINC00963-220ENST00000625171 EGFEM1PQ0D2K5 195 aa8.64□□□□□ -1.03
LINC00963-220ENST00000625171 GFI1BQ5VTD9 330 aa8.64□□□□□ -1.03
LINC00963-220ENST00000625171 GTSCR1Q86UQ5 136 aa8.64□□□□□ -1.03
LINC00963-220ENST00000625171 SCRT2Q9NQ03 307 aa8.64□□□□□ -1.03
LINC00963-220ENST00000625171 KIR3DS1Q14943 382 aa8.63□□□□□ -1.03
LINC00963-220ENST00000625171 FAM159AQ6UWV7 190 aa8.63□□□□□ -1.03
LINC00963-220ENST00000625171 Q8N1Y9 231 aa8.63□□□□□ -1.03
LINC00963-220ENST00000625171 TMEM256Q8N2U0 113 aa8.63□□□□□ -1.03
LINC00963-220ENST00000625171 FER1L6-AS1Q8NA97 138 aa8.63□□□□□ -1.03
LINC00963-220ENST00000625171 NBEAL2Q6ZNJ1 2754 aa8.62□□□□□ -1.03
LINC00963-220ENST00000625171 M0R2Z0 102 aa8.62□□□□□ -1.03
LINC00963-220ENST00000625171 HLA-DQA1P01909 254 aa8.62□□□□□ -1.03
LINC00963-220ENST00000625171 IGLL1P15814 213 aa8.62□□□□□ -1.03
LINC00963-220ENST00000625171 RPS10P46783 165 aaKnown RBP8.62□□□□□ -1.03
LINC00963-220ENST00000625171 HBBP68871 147 aa8.62□□□□□ -1.03
LINC00963-220ENST00000625171 RIGQ13278 110 aa8.62□□□□□ -1.03
LINC00963-220ENST00000625171 ZNF124Q15973 351 aa8.62□□□□□ -1.03
LINC00963-220ENST00000625171 SPINK13Q1W4C9 94 aa8.62□□□□□ -1.03
LINC00963-220ENST00000625171 ANXA2RQ3ZCQ2 193 aa8.62□□□□□ -1.03
LINC00963-220ENST00000625171 ZNF493Q6ZR52 646 aa8.62□□□□□ -1.03
LINC00963-220ENST00000625171 PTH2Q96A98 100 aa8.62□□□□□ -1.03
LINC00963-220ENST00000625171 C1QTNF4Q9BXJ3 329 aa8.62□□□□□ -1.03
LINC00963-220ENST00000625171 IGHV1OR15-1A0A075B7D0 117 aa8.61□□□□□ -1.03
LINC00963-220ENST00000625171 TRAV12-3A0A0B4J271 114 aa8.61□□□□□ -1.03
LINC00963-220ENST00000625171 KIR2DL5BA0A0G2JN68 375 aa8.61□□□□□ -1.03
LINC00963-220ENST00000625171 KIR2DL5BA0A0G2JPC4 375 aa8.61□□□□□ -1.03
LINC00963-220ENST00000625171 GZMBP10144 247 aa8.61□□□□□ -1.03
LINC00963-220ENST00000625171 TCL1AP56279 114 aa8.61□□□□□ -1.03
LINC00963-220ENST00000625171 CACNG7P62955 275 aa8.61□□□□□ -1.03
LINC00963-220ENST00000625171 PIK3CD-AS1Q5SR53 167 aa8.61□□□□□ -1.03
LINC00963-220ENST00000625171 LYZL1Q6UWQ5 148 aa8.61□□□□□ -1.03
LINC00963-220ENST00000625171 TMEM136Q6ZRR5 245 aa8.61□□□□□ -1.03
LINC00963-220ENST00000625171 KIR2DL5AQ8N109 375 aa8.61□□□□□ -1.03
LINC00963-220ENST00000625171 KIR2DL5BQ8NHK3 375 aa8.61□□□□□ -1.03
LINC00963-220ENST00000625171 BORCS7Q96B45 105 aa8.61□□□□□ -1.03
LINC00963-220ENST00000625171 PGLYRP4Q96LB8 373 aa8.61□□□□□ -1.03
LINC00963-220ENST00000625171 CMYA5Q8N3K9 4069 aa8.61□□□□□ -1.03
LINC00963-220ENST00000625171 NOTCH3Q9UM47 2321 aa8.6□□□□□ -1.03
LINC00963-220ENST00000625171 AGRNO00468 2067 aa8.6□□□□□ -1.03
LINC00963-220ENST00000625171 A8MZ25 164 aa8.6□□□□□ -1.03
LINC00963-220ENST00000625171 C1orf196B1AJZ1 125 aa8.6□□□□□ -1.03
LINC00963-220ENST00000625171 IGKV3-20P01619 116 aa8.6□□□□□ -1.03
LINC00963-220ENST00000625171 GIG44P09565 113 aaPredicted RBP8.6□□□□□ -1.03
LINC00963-220ENST00000625171 ASIPP42127 132 aa8.6□□□□□ -1.03
LINC00963-220ENST00000625171 Q6ZQT7 251 aa8.6□□□□□ -1.03
LINC00963-220ENST00000625171 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.6□□□□□ -1.03
LINC00963-220ENST00000625171 TRGV11A0A075B6L2 103 aa8.59□□□□□ -1.03
LINC00963-220ENST00000625171 TRAV12-2A0A075B6T6 113 aa8.59□□□□□ -1.03
LINC00963-220ENST00000625171 NXPH4O95158 308 aa8.59□□□□□ -1.03
LINC00963-220ENST00000625171 INSP01308 110 aa8.59□□□□□ -1.03
LINC00963-220ENST00000625171 TRGC2P03986 189 aa8.59□□□□□ -1.03
LINC00963-220ENST00000625171 ARMS2P0C7Q2 107 aa8.59□□□□□ -1.03
LINC00963-220ENST00000625171 RNASE3P12724 160 aaKnown RBP8.59□□□□□ -1.03
LINC00963-220ENST00000625171 RAB5BP61020 215 aa8.59□□□□□ -1.03
LINC00963-220ENST00000625171 DMRTA1Q5VZB9 504 aa8.59□□□□□ -1.03
LINC00963-220ENST00000625171 CSNK1G2-AS1Q8NCQ2 148 aa8.59□□□□□ -1.03
LINC00963-220ENST00000625171 C9orf85Q96MD7 179 aa8.59□□□□□ -1.03
LINC00963-220ENST00000625171 NDUFAF3Q9BU61 184 aa8.59□□□□□ -1.03
LINC00963-220ENST00000625171 TRAPPC1Q9Y5R8 145 aa8.59□□□□□ -1.03
LINC00963-220ENST00000625171 TMSB15BA0A087X1C1 80 aa8.58□□□□□ -1.04
LINC00963-220ENST00000625171 IGHV3-16A0A0C4DH30 117 aa8.58□□□□□ -1.04
LINC00963-220ENST00000625171 GRIFINA4D1Z8 144 aa8.58□□□□□ -1.04
LINC00963-220ENST00000625171 J3KRW8 73 aa8.58□□□□□ -1.04
LINC00963-220ENST00000625171 RBMY1A1P0DJD3 496 aaKnown RBP8.58□□□□□ -1.04
LINC00963-220ENST00000625171 RBMY1CP0DJD4 496 aa8.58□□□□□ -1.04
LINC00963-220ENST00000625171 NTF3P20783 257 aa8.58□□□□□ -1.04
LINC00963-220ENST00000625171 RBMY1FQ15415 496 aaKnown RBP8.58□□□□□ -1.04
LINC00963-220ENST00000625171 MRPL54Q6P161 138 aaKnown RBP8.58□□□□□ -1.04
LINC00963-220ENST00000625171 C1orf158Q8N1D5 194 aa8.58□□□□□ -1.04
LINC00963-220ENST00000625171 FRZBQ92765 325 aa8.58□□□□□ -1.04
LINC00963-220ENST00000625171 TMEM191AQ9H0A3 160 aa8.58□□□□□ -1.04
LINC00963-220ENST00000625171 CSTL1Q9H114 145 aa8.58□□□□□ -1.04
LINC00963-220ENST00000625171 SNURFLB1AK76 121 aa8.57□□□□□ -1.04
LINC00963-220ENST00000625171 GNRH2O43555 120 aa8.57□□□□□ -1.04
LINC00963-220ENST00000625171 FRMD6-AS1P0C7T7 363 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms