RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 USP9XQ93008 2570 aaPredicted RBP11.64□□□□□ -0.55
LINC00552-201ENST00000625151 SPTAN1Q13813 2472 aaKnown RBP11.63□□□□□ -0.55
LINC00552-201ENST00000625151 K7EP34 96 aa11.63□□□□□ -0.55
LINC00552-201ENST00000625151 GTSCR1Q86UQ5 136 aa11.63□□□□□ -0.55
LINC00552-201ENST00000625151 SMIM17P0DL12 118 aa11.63□□□□□ -0.55
LINC00552-201ENST00000625151 C9orf47Q6ZRZ4 202 aa11.63□□□□□ -0.55
LINC00552-201ENST00000625151 U3KQE9 123 aa11.63□□□□□ -0.55
LINC00552-201ENST00000625151 TRBV7-1A0A0A6YYK4 115 aa11.62□□□□□ -0.55
LINC00552-201ENST00000625151 G3V4G9 280 aa11.62□□□□□ -0.55
LINC00552-201ENST00000625151 SAP30O75446 220 aa11.62□□□□□ -0.55
LINC00552-201ENST00000625151 PRR9Q5T870 116 aa11.62□□□□□ -0.55
LINC00552-201ENST00000625151 MRPL53Q96EL3 112 aaKnown RBP11.62□□□□□ -0.55
LINC00552-201ENST00000625151 FXYD2P54710 66 aa11.62□□□□□ -0.55
LINC00552-201ENST00000625151 ZC2HC1BQ5TFG8 222 aa11.62□□□□□ -0.55
LINC00552-201ENST00000625151 TMEM219Q86XT9 240 aa11.62□□□□□ -0.55
LINC00552-201ENST00000625151 C5orf56Q8N8D9 126 aa11.62□□□□□ -0.55
LINC00552-201ENST00000625151 UBTD1Q9HAC8 227 aa11.62□□□□□ -0.55
LINC00552-201ENST00000625151 MYO18BQ8IUG5 2567 aa11.61□□□□□ -0.55
LINC00552-201ENST00000625151 DPM2O94777 84 aa11.61□□□□□ -0.55
LINC00552-201ENST00000625151 GCSHP23434 173 aa11.61□□□□□ -0.55
LINC00552-201ENST00000625151 LMO4P61968 165 aa11.61□□□□□ -0.55
LINC00552-201ENST00000625151 BPESC1Q9GZL8 116 aa11.61□□□□□ -0.55
LINC00552-201ENST00000625151 LINC00527Q9UJ94 153 aa11.61□□□□□ -0.55
LINC00552-201ENST00000625151 CRYBG3Q68DQ2 2970 aa11.61□□□□□ -0.55
LINC00552-201ENST00000625151 A0A1W2PPM0 123 aa11.61□□□□□ -0.55
LINC00552-201ENST00000625151 H3BVH4 76 aa11.61□□□□□ -0.55
LINC00552-201ENST00000625151 NPFFO15130 113 aa11.61□□□□□ -0.55
LINC00552-201ENST00000625151 ATP5LO75964 103 aa11.61□□□□□ -0.55
LINC00552-201ENST00000625151 IGF1P05019 195 aa11.61□□□□□ -0.55
LINC00552-201ENST00000625151 LAGE3Q14657 143 aa11.61□□□□□ -0.55
LINC00552-201ENST00000625151 SPANXN1Q5VSR9 72 aa11.61□□□□□ -0.55
LINC00552-201ENST00000625151 CHAC1Q9BUX1 264 aa11.61□□□□□ -0.55
LINC00552-201ENST00000625151 HIGD1BQ9P298 99 aa11.61□□□□□ -0.55
LINC00552-201ENST00000625151 TRAV40A0A0B4J280 105 aa11.6□□□□□ -0.55
LINC00552-201ENST00000625151 C16orf92Q96LL3 132 aa11.6□□□□□ -0.55
LINC00552-201ENST00000625151 C20orf173Q96LM9 149 aa11.6□□□□□ -0.55
LINC00552-201ENST00000625151 HIF1ANQ9NWT6 349 aa11.6□□□□□ -0.55
LINC00552-201ENST00000625151 TMEM160Q9NX00 188 aa11.6□□□□□ -0.55
LINC00552-201ENST00000625151 MRPL35Q9NZE8 188 aaKnown RBP11.6□□□□□ -0.55
LINC00552-201ENST00000625151 ABCA2Q9BZC7 2435 aa11.6□□□□□ -0.55
LINC00552-201ENST00000625151 TRBV25-1A0A075B6N4 114 aa11.6□□□□□ -0.55
LINC00552-201ENST00000625151 ATP5G2Q06055 141 aa11.6□□□□□ -0.55
LINC00552-201ENST00000625151 IGHV4-4A0A075B6R2 117 aa11.59□□□□□ -0.55
LINC00552-201ENST00000625151 J3KRW8 73 aa11.59□□□□□ -0.55
LINC00552-201ENST00000625151 PSMG4Q5JS54 123 aa11.59□□□□□ -0.55
LINC00552-201ENST00000625151 EFNA4P52798 201 aa11.59□□□□□ -0.55
LINC00552-201ENST00000625151 SPCS1Q9Y6A9 102 aa11.59□□□□□ -0.55
LINC00552-201ENST00000625151 SPRY2O43597 315 aa11.58□□□□□ -0.56
LINC00552-201ENST00000625151 SMIM13P0DJ93 91 aa11.58□□□□□ -0.56
LINC00552-201ENST00000625151 ZNF843Q8N446 348 aa11.58□□□□□ -0.56
LINC00552-201ENST00000625151 MYOZ3Q8TDC0 251 aa11.58□□□□□ -0.56
LINC00552-201ENST00000625151 GLMPQ8WWB7 406 aa11.58□□□□□ -0.56
LINC00552-201ENST00000625151 IGHV3OR16-10A0A075B7F0 116 aa11.58□□□□□ -0.56
LINC00552-201ENST00000625151 K7ERJ3 54 aa11.58□□□□□ -0.56
LINC00552-201ENST00000625151 ATP6V0BQ99437 205 aa11.57□□□□□ -0.56
LINC00552-201ENST00000625151 AGRNO00468 2067 aa11.57□□□□□ -0.56
LINC00552-201ENST00000625151 TRAV41A0A0B4J266 112 aa11.57□□□□□ -0.56
LINC00552-201ENST00000625151 DEFB1P60022 68 aa11.57□□□□□ -0.56
LINC00552-201ENST00000625151 C19orf54Q5BKX5 351 aa11.57□□□□□ -0.56
LINC00552-201ENST00000625151 UNQ9165/PRO28630Q6UXU0 137 aa11.57□□□□□ -0.56
LINC00552-201ENST00000625151 GPHB5Q86YW7 130 aa11.57□□□□□ -0.56
LINC00552-201ENST00000625151 CHD6Q8TD26 2715 aa11.57□□□□□ -0.56
LINC00552-201ENST00000625151 TRBV12-3P01733 135 aa11.56□□□□□ -0.56
LINC00552-201ENST00000625151 SAMD5Q5TGI4 173 aa11.56□□□□□ -0.56
LINC00552-201ENST00000625151 MAPKAPK5-AS1Q8N8E1 139 aa11.56□□□□□ -0.56
LINC00552-201ENST00000625151 CSMD2Q7Z408 3487 aa11.56□□□□□ -0.56
LINC00552-201ENST00000625151 A0A087WX48 190 aa11.56□□□□□ -0.56
LINC00552-201ENST00000625151 K7EMI3 77 aa11.56□□□□□ -0.56
LINC00552-201ENST00000625151 SRSF1Q07955 248 aaKnown RBP eCLIP11.56□□□□□ -0.56
LINC00552-201ENST00000625151 C9orf139Q6ZV77 190 aa11.56□□□□□ -0.56
LINC00552-201ENST00000625151 UBR5O95071 2799 aaPredicted RBP11.55□□□□□ -0.56
LINC00552-201ENST00000625151 FABP2P12104 132 aa11.55□□□□□ -0.56
LINC00552-201ENST00000625151 ARL3P36405 182 aa11.55□□□□□ -0.56
LINC00552-201ENST00000625151 PHLDA1Q8WV24 401 aaPredicted RBP11.55□□□□□ -0.56
LINC00552-201ENST00000625151 MOB4Q9Y3A3 225 aa11.55□□□□□ -0.56
LINC00552-201ENST00000625151 DOPEY1Q5JWR5 2465 aa11.55□□□□□ -0.56
LINC00552-201ENST00000625151 HLA-DRB4P13762 266 aa11.55□□□□□ -0.56
LINC00552-201ENST00000625151 ZFAND2AQ8N6M9 145 aa11.55□□□□□ -0.56
LINC00552-201ENST00000625151 OR5A1Q8NGJ0 315 aa11.55□□□□□ -0.56
LINC00552-201ENST00000625151 SMIM2Q9BVW6 85 aa11.55□□□□□ -0.56
LINC00552-201ENST00000625151 HLA-DRB4X5D2U9 266 aa11.55□□□□□ -0.56
LINC00552-201ENST00000625151 M0R381 172 aa11.54□□□□□ -0.56
LINC00552-201ENST00000625151 CEND1Q8N111 149 aa11.54□□□□□ -0.56
LINC00552-201ENST00000625151 MRAP2Q96G30 205 aa11.54□□□□□ -0.56
LINC00552-201ENST00000625151 NHP2Q9NX24 153 aaKnown RBP11.54□□□□□ -0.56
LINC00552-201ENST00000625151 FAM223BA6NKX1 122 aa11.54□□□□□ -0.56
LINC00552-201ENST00000625151 NEGR1Q7Z3B1 354 aa11.54□□□□□ -0.56
LINC00552-201ENST00000625151 FAM223AQ8IWN6 122 aa11.54□□□□□ -0.56
LINC00552-201ENST00000625151 TM2D2Q9BX73 214 aa11.54□□□□□ -0.56
LINC00552-201ENST00000625151 LENEPQ9Y5L5 61 aa11.54□□□□□ -0.56
LINC00552-201ENST00000625151 KLK15Q9H2R5 256 aa11.53□□□□□ -0.56
LINC00552-201ENST00000625151 BRD3OSQ6XYD6 125 aa11.53□□□□□ -0.56
LINC00552-201ENST00000625151 RASL10AQ92737 203 aa11.53□□□□□ -0.56
LINC00552-201ENST00000625151 KMT2BQ9UMN6 2715 aaPredicted RBP11.52□□□□□ -0.56
LINC00552-201ENST00000625151 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.52□□□□□ -0.56
LINC00552-201ENST00000625151 SOCS3O14543 225 aa11.52□□□□□ -0.56
LINC00552-201ENST00000625151 RPL39LQ96EH5 51 aaKnown RBP11.52□□□□□ -0.56
LINC00552-201ENST00000625151 PLNP26678 52 aa11.52□□□□□ -0.57
LINC00552-201ENST00000625151 LINC00477Q96M19 166 aa11.52□□□□□ -0.57
LINC00552-201ENST00000625151 CRIP2P52943 208 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms