RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 TMEM182Q6ZP80 229 aaPredicted RBP3.39□□□□□ -1.87
CDKL5-204ENST00000623364 ZFAND2AQ8N6M9 145 aa3.39□□□□□ -1.87
CDKL5-204ENST00000623364 OR52I1Q8NGK6 324 aa3.39□□□□□ -1.87
CDKL5-204ENST00000623364 OR2T35Q8NGX2 323 aa3.39□□□□□ -1.87
CDKL5-204ENST00000623364 CHCHD5Q9BSY4 110 aa3.39□□□□□ -1.87
CDKL5-204ENST00000623364 AUNIPQ9H7T9 357 aa3.39□□□□□ -1.87
CDKL5-204ENST00000623364 AMBNQ9NP70 447 aa3.39□□□□□ -1.87
CDKL5-204ENST00000623364 BATF3Q9NR55 127 aa3.39□□□□□ -1.87
CDKL5-204ENST00000623364 ANAPC11Q9NYG5 84 aa3.39□□□□□ -1.87
CDKL5-204ENST00000623364 RAB26Q9ULW5 256 aa3.39□□□□□ -1.87
CDKL5-204ENST00000623364 PXMP4Q9Y6I8 212 aa3.39□□□□□ -1.87
CDKL5-204ENST00000623364 GVQW2A0A096LPI5 108 aaPredicted RBP3.38□□□□□ -1.87
CDKL5-204ENST00000623364 TMEM127O75204 238 aa3.38□□□□□ -1.87
CDKL5-204ENST00000623364 SPCS3P61009 180 aa3.38□□□□□ -1.87
CDKL5-204ENST00000623364 C2orf76Q3KRA6 126 aa3.38□□□□□ -1.87
CDKL5-204ENST00000623364 LAIR2Q6ISS4 152 aa3.38□□□□□ -1.87
CDKL5-204ENST00000623364 KRTAP5-7Q6L8G8 165 aa3.38□□□□□ -1.87
CDKL5-204ENST00000623364 TMEM170AQ8WVE7 144 aa3.38□□□□□ -1.87
CDKL5-204ENST00000623364 CANT1Q8WVQ1 401 aa3.38□□□□□ -1.87
CDKL5-204ENST00000623364 PYDC1Q8WXC3 89 aa3.38□□□□□ -1.87
CDKL5-204ENST00000623364 FAM3DQ96BQ1 224 aa3.38□□□□□ -1.87
CDKL5-204ENST00000623364 YIPF6Q96EC8 236 aa3.38□□□□□ -1.87
CDKL5-204ENST00000623364 TVP23CQ96ET8 276 aa3.38□□□□□ -1.87
CDKL5-204ENST00000623364 ELF5Q9UKW6 265 aaPredicted RBP3.38□□□□□ -1.87
CDKL5-204ENST00000623364 TRBV6-8A0A0A6YYG3 113 aa3.37□□□□□ -1.87
CDKL5-204ENST00000623364 S100GP29377 79 aa3.37□□□□□ -1.87
CDKL5-204ENST00000623364 GPX4P36969 197 aaPredicted RBP3.37□□□□□ -1.87
CDKL5-204ENST00000623364 AKR1C2P52895 323 aa3.37□□□□□ -1.87
CDKL5-204ENST00000623364 UBE2BP63146 152 aa3.37□□□□□ -1.87
CDKL5-204ENST00000623364 FAM229BQ4G0N7 80 aa3.37□□□□□ -1.87
CDKL5-204ENST00000623364 KRTAP5-10Q6L8G5 202 aa3.37□□□□□ -1.87
CDKL5-204ENST00000623364 S100A7AQ86SG5 101 aa3.37□□□□□ -1.87
CDKL5-204ENST00000623364 ZNF2Q9BSG1 426 aaPredicted RBP3.37□□□□□ -1.87
CDKL5-204ENST00000623364 AGPAT4-IT1Q9H0P7 198 aa3.37□□□□□ -1.87
CDKL5-204ENST00000623364 NDUFA13Q9P0J0 144 aa3.37□□□□□ -1.87
CDKL5-204ENST00000623364 RNF24Q9Y225 148 aa3.37□□□□□ -1.87
CDKL5-204ENST00000623364 HIGD1AQ9Y241 93 aa3.37□□□□□ -1.87
CDKL5-204ENST00000623364 TMEM272A0A1B0GTI8 110 aa3.36□□□□□ -1.87
CDKL5-204ENST00000623364 METTL21EPA6NDL7 271 aa3.36□□□□□ -1.87
CDKL5-204ENST00000623364 SNRPCP09234 159 aaKnown RBP3.36□□□□□ -1.87
CDKL5-204ENST00000623364 POLR2IP36954 125 aaKnown RBP3.36□□□□□ -1.87
CDKL5-204ENST00000623364 PIGPP57054 158 aa3.36□□□□□ -1.87
CDKL5-204ENST00000623364 RBX1P62877 108 aa3.36□□□□□ -1.87
CDKL5-204ENST00000623364 RPP30P78346 268 aaKnown RBP3.36□□□□□ -1.87
CDKL5-204ENST00000623364 CDNFQ49AH0 187 aa3.36□□□□□ -1.87
CDKL5-204ENST00000623364 OR1S1Q8NH92 325 aa3.36□□□□□ -1.87
CDKL5-204ENST00000623364 NUDCD2Q8WVJ2 157 aa3.36□□□□□ -1.87
CDKL5-204ENST00000623364 CCDC90BQ9GZT6 254 aa3.36□□□□□ -1.87
CDKL5-204ENST00000623364 BLOC1S6Q9UL45 172 aa3.36□□□□□ -1.87
CDKL5-204ENST00000623364 PHLDA3Q9Y5J5 127 aa3.36□□□□□ -1.87
CDKL5-204ENST00000623364 A0A0G2JRQ6 117 aa3.35□□□□□ -1.87
CDKL5-204ENST00000623364 CEBPZOSA8MTT3 80 aa3.35□□□□□ -1.87
CDKL5-204ENST00000623364 DIRC3C9JPN6 131 aa3.35□□□□□ -1.87
CDKL5-204ENST00000623364 PTTG1O95997 202 aa3.35□□□□□ -1.87
CDKL5-204ENST00000623364 IGKV1-5P01602 117 aa3.35□□□□□ -1.87
CDKL5-204ENST00000623364 ETV1P50549 477 aa3.35□□□□□ -1.87
CDKL5-204ENST00000623364 GNG2P59768 71 aa3.35□□□□□ -1.87
CDKL5-204ENST00000623364 UBE2D3P61077 147 aa3.35□□□□□ -1.87
CDKL5-204ENST00000623364 SURF2Q15527 256 aaPredicted RBP3.35□□□□□ -1.87
CDKL5-204ENST00000623364 NMSQ5H8A3 153 aa3.35□□□□□ -1.87
CDKL5-204ENST00000623364 LINC00242Q5T6M2 205 aa3.35□□□□□ -1.87
CDKL5-204ENST00000623364 TMEM78Q5T7P6 136 aa3.35□□□□□ -1.87
CDKL5-204ENST00000623364 IZUMO2Q6UXV1 221 aa3.35□□□□□ -1.87
CDKL5-204ENST00000623364 ZFP2Q6ZN57 461 aa3.35□□□□□ -1.87
CDKL5-204ENST00000623364 BEST4Q8NFU0 473 aa3.35□□□□□ -1.87
CDKL5-204ENST00000623364 DTD1Q8TEA8 209 aa3.35□□□□□ -1.87
CDKL5-204ENST00000623364 UFD1Q92890 307 aa3.35□□□□□ -1.87
CDKL5-204ENST00000623364 MGLLQ99685 303 aa3.35□□□□□ -1.87
CDKL5-204ENST00000623364 VCX3AQ9NNX9 186 aa3.35□□□□□ -1.87
CDKL5-204ENST00000623364 NAGKQ9UJ70 344 aa3.35□□□□□ -1.87
CDKL5-204ENST00000623364 IRGMA1A4Y4 181 aa3.34□□□□□ -1.87
CDKL5-204ENST00000623364 KRTAP23-1A1A580 65 aa3.34□□□□□ -1.87
CDKL5-204ENST00000623364 GAGE12HA6NDE8 117 aa3.34□□□□□ -1.87
CDKL5-204ENST00000623364 A6NN06 94 aa3.34□□□□□ -1.87
CDKL5-204ENST00000623364 H3BTX0 84 aa3.34□□□□□ -1.87
CDKL5-204ENST00000623364 GNRH2O43555 120 aa3.34□□□□□ -1.87
CDKL5-204ENST00000623364 RGS10O43665 173 aa3.34□□□□□ -1.87
CDKL5-204ENST00000623364 HYPMO75409 117 aa3.34□□□□□ -1.87
CDKL5-204ENST00000623364 OR5G3P0C626 314 aa3.34□□□□□ -1.87
CDKL5-204ENST00000623364 SYCNQ0VAF6 134 aa3.34□□□□□ -1.87
CDKL5-204ENST00000623364 PHLDA2Q53GA4 152 aa3.34□□□□□ -1.87
CDKL5-204ENST00000623364 ACOT7LQ6ZUV0 252 aa3.34□□□□□ -1.87
CDKL5-204ENST00000623364 C8orf59Q8N0T1 100 aaPredicted RBP3.34□□□□□ -1.87
CDKL5-204ENST00000623364 C14orf178Q8N769 122 aaPredicted RBP3.34□□□□□ -1.87
CDKL5-204ENST00000623364 SPRR2FQ96RM1 72 aa3.34□□□□□ -1.87
CDKL5-204ENST00000623364 GABARAPL1Q9H0R8 117 aa3.34□□□□□ -1.87
CDKL5-204ENST00000623364 SCN3BQ9NY72 215 aa3.34□□□□□ -1.87
CDKL5-204ENST00000623364 A0A087WXM4 84 aa3.33□□□□□ -1.88
CDKL5-204ENST00000623364 LOC100130705A0A1B0GUX0 176 aa3.33□□□□□ -1.88
CDKL5-204ENST00000623364 RBAKDNA6NC62 111 aa3.33□□□□□ -1.88
CDKL5-204ENST00000623364 MRPS12O15235 138 aaKnown RBP3.33□□□□□ -1.88
CDKL5-204ENST00000623364 RPL28P46779 137 aaKnown RBP3.33□□□□□ -1.88
CDKL5-204ENST00000623364 ZNF506Q5JVG8 444 aa3.33□□□□□ -1.88
CDKL5-204ENST00000623364 TPRKBQ9Y3C4 175 aa3.33□□□□□ -1.88
CDKL5-204ENST00000623364 U3KQ87 197 aa3.33□□□□□ -1.88
CDKL5-204ENST00000623364 SMIM31A0A1B0GVY4 71 aa3.32□□□□□ -1.88
CDKL5-204ENST00000623364 DUXBA0A1W2PPF3 345 aa3.32□□□□□ -1.88
CDKL5-204ENST00000623364 EI24O14681 340 aa3.32□□□□□ -1.88
CDKL5-204ENST00000623364 HIST1H1EP10412 219 aaKnown RBP3.32□□□□□ -1.88
CDKL5-204ENST00000623364 BCL2P10415 239 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms