RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 CDKN1BP46527 198 aa12.25□□□□□ -0.45
LDB3-208ENST00000623007 TDRG1Q3Y452 100 aa12.25□□□□□ -0.45
LDB3-208ENST00000623007 MRPL51Q4U2R6 128 aaKnown RBP12.25□□□□□ -0.45
LDB3-208ENST00000623007 FA2HQ7L5A8 372 aa12.25□□□□□ -0.45
LDB3-208ENST00000623007 AMN1Q8IY45 258 aa12.25□□□□□ -0.45
LDB3-208ENST00000623007 C11orf21Q9P2W6 132 aa12.25□□□□□ -0.45
LDB3-208ENST00000623007 C7orf71A4D174 169 aa12.24□□□□□ -0.45
LDB3-208ENST00000623007 CSN3P07498 182 aa12.24□□□□□ -0.45
LDB3-208ENST00000623007 TFPI2P48307 235 aa12.24□□□□□ -0.45
LDB3-208ENST00000623007 PRR9Q5T870 116 aa12.24□□□□□ -0.45
LDB3-208ENST00000623007 HSPB8Q9UJY1 196 aa12.24□□□□□ -0.45
LDB3-208ENST00000623007 ITPR3Q14573 2671 aa12.24□□□□□ -0.45
LDB3-208ENST00000623007 D6R8Y8 96 aa12.23□□□□□ -0.45
LDB3-208ENST00000623007 F6UB75 175 aa12.23□□□□□ -0.45
LDB3-208ENST00000623007 CCL24O00175 119 aa12.23□□□□□ -0.45
LDB3-208ENST00000623007 EDN2P20800 178 aa12.23□□□□□ -0.45
LDB3-208ENST00000623007 DEFB136Q30KP8 78 aa12.23□□□□□ -0.45
LDB3-208ENST00000623007 DLX4Q92988 240 aaPredicted RBP12.23□□□□□ -0.45
LDB3-208ENST00000623007 PHLDA3Q9Y5J5 127 aa12.23□□□□□ -0.45
LDB3-208ENST00000623007 TCF21O43680 179 aa12.22□□□□□ -0.45
LDB3-208ENST00000623007 PPP1R17O96001 155 aa12.22□□□□□ -0.45
LDB3-208ENST00000623007 PMCHL1Q16048 86 aa12.22□□□□□ -0.45
LDB3-208ENST00000623007 MRAP2Q96G30 205 aa12.22□□□□□ -0.45
LDB3-208ENST00000623007 CLUHP3Q96NS8 147 aa12.22□□□□□ -0.45
LDB3-208ENST00000623007 MAP1LC3AQ9H492 121 aa12.22□□□□□ -0.45
LDB3-208ENST00000623007 SCRT2Q9NQ03 307 aa12.22□□□□□ -0.45
LDB3-208ENST00000623007 A8MTW9 85 aa12.22□□□□□ -0.45
LDB3-208ENST00000623007 BTF3P20290 206 aaKnown RBP12.22□□□□□ -0.45
LDB3-208ENST00000623007 KRTDAPP60985 99 aa12.22□□□□□ -0.45
LDB3-208ENST00000623007 DEFB114Q30KQ6 69 aa12.22□□□□□ -0.45
LDB3-208ENST00000623007 ANXA2RQ3ZCQ2 193 aa12.22□□□□□ -0.45
LDB3-208ENST00000623007 ADAMTSL5Q6ZMM2 481 aa12.22□□□□□ -0.45
LDB3-208ENST00000623007 DEFB125Q8N687 156 aa12.22□□□□□ -0.45
LDB3-208ENST00000623007 OR10AG1Q8NH19 301 aa12.22□□□□□ -0.45
LDB3-208ENST00000623007 NXT2Q9NPJ8 142 aaKnown RBP12.22□□□□□ -0.45
LDB3-208ENST00000623007 C20orf202A1L168 122 aa12.21□□□□□ -0.45
LDB3-208ENST00000623007 H3BVH4 76 aa12.21□□□□□ -0.45
LDB3-208ENST00000623007 LEPROTL1O95214 131 aa12.21□□□□□ -0.45
LDB3-208ENST00000623007 C18orf65Q6ZTR6 163 aa12.21□□□□□ -0.45
LDB3-208ENST00000623007 LURAP1LQ8IV03 231 aa12.21□□□□□ -0.45
LDB3-208ENST00000623007 RNF114Q9Y508 228 aa12.21□□□□□ -0.45
LDB3-208ENST00000623007 CSMD2Q7Z408 3487 aa12.21□□□□□ -0.46
LDB3-208ENST00000623007 TEX15Q9BXT5 2789 aa12.21□□□□□ -0.46
LDB3-208ENST00000623007 PDZD2O15018 2839 aa12.2□□□□□ -0.46
LDB3-208ENST00000623007 SVEP1Q4LDE5 3571 aa12.2□□□□□ -0.46
LDB3-208ENST00000623007 LY6G6DO95868 133 aa12.2□□□□□ -0.46
LDB3-208ENST00000623007 HLA-DRB4P13762 266 aa12.2□□□□□ -0.46
LDB3-208ENST00000623007 TEX43Q6ZNM6 134 aa12.2□□□□□ -0.46
LDB3-208ENST00000623007 FAM19A2Q8N3H0 131 aa12.2□□□□□ -0.46
LDB3-208ENST00000623007 OR2K2Q8NGT1 345 aa12.2□□□□□ -0.46
LDB3-208ENST00000623007 RAX2Q96IS3 184 aa12.2□□□□□ -0.46
LDB3-208ENST00000623007 HLA-DRB4X5D2U9 266 aa12.2□□□□□ -0.46
LDB3-208ENST00000623007 PRSS47A8MTI9 375 aa12.19□□□□□ -0.46
LDB3-208ENST00000623007 NXPH4O95158 308 aa12.19□□□□□ -0.46
LDB3-208ENST00000623007 CD28P10747 220 aa12.19□□□□□ -0.46
LDB3-208ENST00000623007 RNF185Q96GF1 192 aa12.19□□□□□ -0.46
LDB3-208ENST00000623007 URB1-AS1Q96HZ7 61 aa12.19□□□□□ -0.46
LDB3-208ENST00000623007 AP1S3Q96PC3 154 aa12.19□□□□□ -0.46
LDB3-208ENST00000623007 C20orf144Q9BQM9 153 aa12.19□□□□□ -0.46
LDB3-208ENST00000623007 TMEM70Q9BUB7 260 aa12.19□□□□□ -0.46
LDB3-208ENST00000623007 DPH3P1Q9H4G8 78 aa12.19□□□□□ -0.46
LDB3-208ENST00000623007 IGHV1-24A0A0C4DH33 117 aa12.19□□□□□ -0.46
LDB3-208ENST00000623007 J3KRW8 73 aa12.19□□□□□ -0.46
LDB3-208ENST00000623007 CRXO43186 299 aaPredicted RBP12.19□□□□□ -0.46
LDB3-208ENST00000623007 C3orf79P0CE67 100 aa12.19□□□□□ -0.46
LDB3-208ENST00000623007 TMEM61Q8N0U2 210 aa12.19□□□□□ -0.46
LDB3-208ENST00000623007 UNC79Q9P2D8 2635 aa12.18□□□□□ -0.46
LDB3-208ENST00000623007 TRGV11A0A075B6L2 103 aa12.18□□□□□ -0.46
LDB3-208ENST00000623007 LINC01546A6NGU7 62 aa12.18□□□□□ -0.46
LDB3-208ENST00000623007 SYT8Q8NBV8 401 aa12.18□□□□□ -0.46
LDB3-208ENST00000623007 CITED2Q99967 270 aaPredicted RBP12.18□□□□□ -0.46
LDB3-208ENST00000623007 MAP1LC3CQ9BXW4 147 aa12.18□□□□□ -0.46
LDB3-208ENST00000623007 CELSR1Q9NYQ6 3014 aa12.18□□□□□ -0.46
LDB3-208ENST00000623007 CSMD1Q96PZ7 3565 aa12.18□□□□□ -0.46
LDB3-208ENST00000623007 MAP1AP78559 2803 aaPredicted RBP12.18□□□□□ -0.46
LDB3-208ENST00000623007 K7EMI3 77 aa12.17□□□□□ -0.46
LDB3-208ENST00000623007 SSTP61278 116 aa12.17□□□□□ -0.46
LDB3-208ENST00000623007 MSRB1Q9NZV6 116 aa12.17□□□□□ -0.46
LDB3-208ENST00000623007 MUC21A0A0G2JKD1 596 aa12.16□□□□□ -0.46
LDB3-208ENST00000623007 MUC21A0A140T8X8 626 aa12.16□□□□□ -0.46
LDB3-208ENST00000623007 M0R381 172 aa12.16□□□□□ -0.46
LDB3-208ENST00000623007 CD33P20138 364 aa12.16□□□□□ -0.46
LDB3-208ENST00000623007 PROK1P58294 105 aa12.16□□□□□ -0.46
LDB3-208ENST00000623007 DEFB131AP59861 70 aa12.16□□□□□ -0.46
LDB3-208ENST00000623007 DEFB1P60022 68 aa12.16□□□□□ -0.46
LDB3-208ENST00000623007 MUC21Q5SSG8 566 aa12.16□□□□□ -0.46
LDB3-208ENST00000623007 FAM110AQ9BQ89 295 aa12.16□□□□□ -0.46
LDB3-208ENST00000623007 VAMP8Q9BV40 100 aa12.16□□□□□ -0.46
LDB3-208ENST00000623007 ZANQ9Y493 2812 aa12.16□□□□□ -0.46
LDB3-208ENST00000623007 IGHV1OR15-1A0A075B7D0 117 aa12.16□□□□□ -0.46
LDB3-208ENST00000623007 TRAV12-3A0A0B4J271 114 aa12.16□□□□□ -0.46
LDB3-208ENST00000623007 TNFRSF6BO95407 300 aa12.16□□□□□ -0.46
LDB3-208ENST00000623007 SMIM17P0DL12 118 aa12.16□□□□□ -0.46
LDB3-208ENST00000623007 RNASE3P12724 160 aaKnown RBP12.16□□□□□ -0.46
LDB3-208ENST00000623007 PET117Q6UWS5 81 aa12.16□□□□□ -0.46
LDB3-208ENST00000623007 AMTNQ6UX39 209 aa12.16□□□□□ -0.46
LDB3-208ENST00000623007 NDUFA11Q86Y39 141 aa12.16□□□□□ -0.46
LDB3-208ENST00000623007 FLNAP21333 2647 aaKnown RBP12.15□□□□□ -0.46
LDB3-208ENST00000623007 H3BMM0 161 aa12.15□□□□□ -0.46
LDB3-208ENST00000623007 CD7P09564 240 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms