RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 SFTA2Q6UW10 78 aa9.68□□□□□ -0.86
LITAF-221ENST00000622633 LINC01560Q8TB33 94 aa9.68□□□□□ -0.86
LITAF-221ENST00000622633 C17orf77Q96MU5 243 aa9.68□□□□□ -0.86
LITAF-221ENST00000622633 HIST1H4GQ99525 98 aa9.68□□□□□ -0.86
LITAF-221ENST00000622633 IGKV1-17P01599 117 aa9.67□□□□□ -0.86
LITAF-221ENST00000622633 IGLV2-11P01706 119 aa9.67□□□□□ -0.86
LITAF-221ENST00000622633 CD3EP07766 207 aa9.67□□□□□ -0.86
LITAF-221ENST00000622633 FCER1GP30273 86 aa9.67□□□□□ -0.86
LITAF-221ENST00000622633 CT83Q5H943 113 aa9.67□□□□□ -0.86
LITAF-221ENST00000622633 PSMG4Q5JS54 123 aa9.67□□□□□ -0.86
LITAF-221ENST00000622633 Q86TA4 180 aa9.67□□□□□ -0.86
LITAF-221ENST00000622633 LOC107984156A0A0G2JMH3 177 aa9.67□□□□□ -0.86
LITAF-221ENST00000622633 GTSCR1Q86UQ5 136 aa9.67□□□□□ -0.86
LITAF-221ENST00000622633 ARL17AQ8IVW1 177 aa9.67□□□□□ -0.86
LITAF-221ENST00000622633 GATD1Q8NB37 220 aa9.67□□□□□ -0.86
LITAF-221ENST00000622633 OVOL3O00110 214 aa9.66□□□□□ -0.86
LITAF-221ENST00000622633 HAX1O00165 279 aa9.66□□□□□ -0.86
LITAF-221ENST00000622633 PAX8Q06710 450 aa9.66□□□□□ -0.86
LITAF-221ENST00000622633 ZNF672Q499Z4 452 aaPredicted RBP9.66□□□□□ -0.86
LITAF-221ENST00000622633 TMEM14CQ9P0S9 112 aa9.66□□□□□ -0.86
LITAF-221ENST00000622633 ZNF785A8K8V0 405 aa9.66□□□□□ -0.86
LITAF-221ENST00000622633 H3BVH4 76 aa9.66□□□□□ -0.86
LITAF-221ENST00000622633 TCL1BO95988 128 aa9.66□□□□□ -0.86
LITAF-221ENST00000622633 HLA-DRB4P13762 266 aa9.66□□□□□ -0.86
LITAF-221ENST00000622633 HES1Q14469 280 aa9.66□□□□□ -0.86
LITAF-221ENST00000622633 C9orf153Q5TBE3 101 aa9.66□□□□□ -0.86
LITAF-221ENST00000622633 S4R3C0 116 aa9.66□□□□□ -0.86
LITAF-221ENST00000622633 HLA-DRB4X5D2U9 266 aa9.66□□□□□ -0.86
LITAF-221ENST00000622633 MYMXA0A1B0GTQ4 84 aa9.65□□□□□ -0.86
LITAF-221ENST00000622633 LY6LH3BQJ8 138 aa9.65□□□□□ -0.86
LITAF-221ENST00000622633 M0R2P5 195 aa9.65□□□□□ -0.86
LITAF-221ENST00000622633 TIMM23O14925 209 aa9.65□□□□□ -0.86
LITAF-221ENST00000622633 HBDP02042 147 aa9.65□□□□□ -0.86
LITAF-221ENST00000622633 WFDC3Q8IUB2 231 aa9.65□□□□□ -0.86
LITAF-221ENST00000622633 ZNRF2Q8NHG8 242 aa9.65□□□□□ -0.86
LITAF-221ENST00000622633 GFRA4Q9GZZ7 299 aa9.65□□□□□ -0.86
LITAF-221ENST00000622633 LOC389332A0A1B0GUA5 103 aa9.65□□□□□ -0.86
LITAF-221ENST00000622633 LINC01549A6NIU2 74 aa9.65□□□□□ -0.86
LITAF-221ENST00000622633 K7EIM0 57 aa9.65□□□□□ -0.86
LITAF-221ENST00000622633 C4orf26Q17RF5 130 aa9.65□□□□□ -0.86
LITAF-221ENST00000622633 TMEM219Q86XT9 240 aa9.65□□□□□ -0.86
LITAF-221ENST00000622633 PTPRZ1P23471 2315 aaPredicted RBP9.65□□□□□ -0.87
LITAF-221ENST00000622633 LY6HO94772 140 aa9.64□□□□□ -0.87
LITAF-221ENST00000622633 GRNP28799 593 aaKnown RBP9.64□□□□□ -0.87
LITAF-221ENST00000622633 FOXC1Q12948 553 aa9.64□□□□□ -0.87
LITAF-221ENST00000622633 ZNF493Q6ZR52 646 aa9.64□□□□□ -0.87
LITAF-221ENST00000622633 TRBV19A0A075B6N1 114 aa9.64□□□□□ -0.87
LITAF-221ENST00000622633 SCGB1C2P0DMR2 95 aa9.64□□□□□ -0.87
LITAF-221ENST00000622633 SHANK2-AS3Q9BTD1 123 aa9.64□□□□□ -0.87
LITAF-221ENST00000622633 J3QLI3 93 aa9.63□□□□□ -0.87
LITAF-221ENST00000622633 SRSF2Q01130 221 aaKnown RBP9.63□□□□□ -0.87
LITAF-221ENST00000622633 TRPT1Q86TN4 253 aaKnown RBP9.63□□□□□ -0.87
LITAF-221ENST00000622633 C3orf22Q8N5N4 141 aa9.63□□□□□ -0.87
LITAF-221ENST00000622633 DUX3Q96PT4 197 aa9.63□□□□□ -0.87
LITAF-221ENST00000622633 SCNM1Q9BWG6 230 aa9.63□□□□□ -0.87
LITAF-221ENST00000622633 CD7P09564 240 aa9.63□□□□□ -0.87
LITAF-221ENST00000622633 HOXB4P17483 251 aaPredicted RBP9.63□□□□□ -0.87
LITAF-221ENST00000622633 C10orf126Q8N4M7 172 aa9.63□□□□□ -0.87
LITAF-221ENST00000622633 ABCA4P78363 2273 aa9.63□□□□□ -0.87
LITAF-221ENST00000622633 LRBAP50851 2863 aa9.62□□□□□ -0.87
LITAF-221ENST00000622633 SRSF9Q13242 221 aaKnown RBP eCLIP9.62□□□□□ -0.87
LITAF-221ENST00000622633 HRCT1Q6UXD1 115 aa9.62□□□□□ -0.87
LITAF-221ENST00000622633 ZNF491Q8N8L2 437 aa9.62□□□□□ -0.87
LITAF-221ENST00000622633 RNF5Q99942 180 aa9.62□□□□□ -0.87
LITAF-221ENST00000622633 VKORC1Q9BQB6 163 aa9.62□□□□□ -0.87
LITAF-221ENST00000622633 ARHGAP32A7KAX9 2087 aa9.62□□□□□ -0.87
LITAF-221ENST00000622633 H3BRN7 92 aa9.62□□□□□ -0.87
LITAF-221ENST00000622633 M0R3E3 92 aa9.62□□□□□ -0.87
LITAF-221ENST00000622633 IGKCP01834 107 aa9.62□□□□□ -0.87
LITAF-221ENST00000622633 ARMS2P0C7Q2 107 aa9.62□□□□□ -0.87
LITAF-221ENST00000622633 SIGLEC15Q6ZMC9 328 aa9.62□□□□□ -0.87
LITAF-221ENST00000622633 TLN1Q9Y490 2541 aaKnown RBP9.62□□□□□ -0.87
LITAF-221ENST00000622633 RBAKDNA6NC62 111 aa9.61□□□□□ -0.87
LITAF-221ENST00000622633 NBR2O15453 112 aa9.61□□□□□ -0.87
LITAF-221ENST00000622633 NPYP01303 97 aa9.61□□□□□ -0.87
LITAF-221ENST00000622633 CRIP1P50238 77 aa9.61□□□□□ -0.87
LITAF-221ENST00000622633 Q8N1Y9 231 aa9.61□□□□□ -0.87
LITAF-221ENST00000622633 RNF125Q96EQ8 232 aa9.61□□□□□ -0.87
LITAF-221ENST00000622633 A0A1B0GUT8 65 aa9.61□□□□□ -0.87
LITAF-221ENST00000622633 ORM1P02763 201 aa9.61□□□□□ -0.87
LITAF-221ENST00000622633 EDN2P20800 178 aa9.61□□□□□ -0.87
LITAF-221ENST00000622633 DPM3Q9P2X0 92 aa9.61□□□□□ -0.87
LITAF-221ENST00000622633 DCHS2Q6V1P9 2916 aa9.6□□□□□ -0.87
LITAF-221ENST00000622633 TRBV6-1A0A0K0K1D8 114 aa9.6□□□□□ -0.87
LITAF-221ENST00000622633 LINC01619G3V211 115 aa9.6□□□□□ -0.87
LITAF-221ENST00000622633 TMEM75Q8N9X5 138 aa9.6□□□□□ -0.87
LITAF-221ENST00000622633 LY6G5BQ8NDX9 201 aa9.6□□□□□ -0.87
LITAF-221ENST00000622633 TRAV2A0A0B4J234 112 aa9.6□□□□□ -0.87
LITAF-221ENST00000622633 MRPS12O15235 138 aaKnown RBP9.6□□□□□ -0.87
LITAF-221ENST00000622633 SLC25A20O43772 301 aa9.6□□□□□ -0.87
LITAF-221ENST00000622633 SEC61GP60059 68 aa9.6□□□□□ -0.87
LITAF-221ENST00000622633 C8orf49Q96NF6 230 aa9.6□□□□□ -0.87
LITAF-221ENST00000622633 CEP295Q9C0D2 2601 aa9.6□□□□□ -0.87
LITAF-221ENST00000622633 UBE2D1P51668 147 aa9.59□□□□□ -0.87
LITAF-221ENST00000622633 RIGQ13278 110 aa9.59□□□□□ -0.87
LITAF-221ENST00000622633 Q5XG85 94 aa9.59□□□□□ -0.87
LITAF-221ENST00000622633 OR11H6Q8NGC7 330 aa9.59□□□□□ -0.87
LITAF-221ENST00000622633 LINC00526Q96FQ7 95 aa9.59□□□□□ -0.87
LITAF-221ENST00000622633 TRAV8-4A0A0B4J246 113 aa9.59□□□□□ -0.87
LITAF-221ENST00000622633 FAM236AA0A1B0GUQ0 79 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms