RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 GNRH2O43555 120 aa9.39□□□□□ -0.91
SCAMP1-207ENST00000621999 ZNF876PQ49A33 203 aa9.39□□□□□ -0.91
SCAMP1-207ENST00000621999 AP1S3Q96PC3 154 aa9.39□□□□□ -0.91
SCAMP1-207ENST00000621999 GDF5OSQ5U4N7 250 aa9.39□□□□□ -0.91
SCAMP1-207ENST00000621999 TMEM136Q6ZRR5 245 aa9.39□□□□□ -0.91
SCAMP1-207ENST00000621999 SMIM12Q96EX1 92 aa9.39□□□□□ -0.91
SCAMP1-207ENST00000621999 U3KQE9 123 aa9.39□□□□□ -0.91
SCAMP1-207ENST00000621999 ELOBQ15370 118 aa9.39□□□□□ -0.91
SCAMP1-207ENST00000621999 LOC102724200A0A096LPH7 203 aaPredicted RBP9.39□□□□□ -0.91
SCAMP1-207ENST00000621999 FCER1GP30273 86 aa9.39□□□□□ -0.91
SCAMP1-207ENST00000621999 CSTL1Q9H114 145 aa9.39□□□□□ -0.91
SCAMP1-207ENST00000621999 TRAV8-2A0A0B4J237 113 aa9.38□□□□□ -0.91
SCAMP1-207ENST00000621999 C9orf47Q6ZRZ4 202 aa9.38□□□□□ -0.91
SCAMP1-207ENST00000621999 C14orf178Q8N769 122 aaPredicted RBP9.38□□□□□ -0.91
SCAMP1-207ENST00000621999 TRGV4A0A0C4DH28 118 aa9.38□□□□□ -0.91
SCAMP1-207ENST00000621999 PRB2P02812 416 aaPredicted RBP9.38□□□□□ -0.91
SCAMP1-207ENST00000621999 DGAT2L7PQ6IED9 249 aa9.38□□□□□ -0.91
SCAMP1-207ENST00000621999 RNF152Q8N8N0 203 aa9.38□□□□□ -0.91
SCAMP1-207ENST00000621999 LENEPQ9Y5L5 61 aa9.38□□□□□ -0.91
SCAMP1-207ENST00000621999 A0A087WWL8 130 aa9.37□□□□□ -0.91
SCAMP1-207ENST00000621999 CXCL1P09341 107 aa9.37□□□□□ -0.91
SCAMP1-207ENST00000621999 SNRPEP62304 92 aaKnown RBP9.37□□□□□ -0.91
SCAMP1-207ENST00000621999 CYSRT1A8MQ03 144 aa9.37□□□□□ -0.91
SCAMP1-207ENST00000621999 DEFB135Q30KP9 77 aa9.37□□□□□ -0.91
SCAMP1-207ENST00000621999 AGRNO00468 2067 aa9.37□□□□□ -0.91
SCAMP1-207ENST00000621999 AMTP48728 403 aa9.37□□□□□ -0.91
SCAMP1-207ENST00000621999 GFI1BQ5VTD9 330 aa9.37□□□□□ -0.91
SCAMP1-207ENST00000621999 OR4C5Q8NGB2 326 aa9.37□□□□□ -0.91
SCAMP1-207ENST00000621999 DCANP1Q8TF63 244 aa9.37□□□□□ -0.91
SCAMP1-207ENST00000621999 GSN-AS1Q9NRJ2 163 aa9.37□□□□□ -0.91
SCAMP1-207ENST00000621999 TMEM242Q9NWH2 141 aa9.37□□□□□ -0.91
SCAMP1-207ENST00000621999 KLF12Q9Y4X4 402 aa9.37□□□□□ -0.91
SCAMP1-207ENST00000621999 HLA-DRB4P13762 266 aa9.36□□□□□ -0.91
SCAMP1-207ENST00000621999 DEFB104AQ8WTQ1 72 aa9.36□□□□□ -0.91
SCAMP1-207ENST00000621999 HLA-DRB4X5D2U9 266 aa9.36□□□□□ -0.91
SCAMP1-207ENST00000621999 SPENQ96T58 3664 aaKnown RBP9.36□□□□□ -0.91
SCAMP1-207ENST00000621999 V9GYV3 84 aa9.36□□□□□ -0.91
SCAMP1-207ENST00000621999 NSD1Q96L73 2696 aaPredicted RBP9.36□□□□□ -0.91
SCAMP1-207ENST00000621999 H3BMM0 161 aa9.36□□□□□ -0.91
SCAMP1-207ENST00000621999 SCGB1D1O95968 90 aa9.36□□□□□ -0.91
SCAMP1-207ENST00000621999 KIR3DS1Q14943 382 aa9.36□□□□□ -0.91
SCAMP1-207ENST00000621999 NIPBLQ6KC79 2804 aaeCLIP9.36□□□□□ -0.91
SCAMP1-207ENST00000621999 CACNG7P62955 275 aa9.35□□□□□ -0.91
SCAMP1-207ENST00000621999 PRELID3AQ96N28 172 aa9.35□□□□□ -0.91
SCAMP1-207ENST00000621999 TNFRSF18Q9Y5U5 241 aa9.35□□□□□ -0.91
SCAMP1-207ENST00000621999 GAGE12BA1L429 117 aa9.35□□□□□ -0.91
SCAMP1-207ENST00000621999 GAGE7O76087 117 aa9.35□□□□□ -0.91
SCAMP1-207ENST00000621999 GAGE12FP0CL80 117 aa9.35□□□□□ -0.91
SCAMP1-207ENST00000621999 GAGE12GP0CL81 117 aa9.35□□□□□ -0.91
SCAMP1-207ENST00000621999 GAGE12IP0CL82 117 aa9.35□□□□□ -0.91
SCAMP1-207ENST00000621999 IGF2BP2-AS1Q96M15 143 aa9.35□□□□□ -0.91
SCAMP1-207ENST00000621999 OR2K2Q8NGT1 345 aa9.35□□□□□ -0.91
SCAMP1-207ENST00000621999 FAM231DQ6ZW35 169 aa9.34□□□□□ -0.91
SCAMP1-207ENST00000621999 ARL6IP6Q8N6S5 226 aa9.34□□□□□ -0.91
SCAMP1-207ENST00000621999 MAP1LC3AQ9H492 121 aa9.34□□□□□ -0.91
SCAMP1-207ENST00000621999 A0A1B0GW15 77 aa9.34□□□□□ -0.91
SCAMP1-207ENST00000621999 MRPS12O15235 138 aaKnown RBP9.34□□□□□ -0.91
SCAMP1-207ENST00000621999 NCR2O95944 276 aa9.34□□□□□ -0.91
SCAMP1-207ENST00000621999 KRTDAPP60985 99 aa9.34□□□□□ -0.91
SCAMP1-207ENST00000621999 TMEM18Q96B42 140 aa9.34□□□□□ -0.91
SCAMP1-207ENST00000621999 PYGO2Q9BRQ0 406 aa9.34□□□□□ -0.91
SCAMP1-207ENST00000621999 NPIPB6E9PJ23 425 aa9.34□□□□□ -0.91
SCAMP1-207ENST00000621999 DEFB4AO15263 64 aa9.34□□□□□ -0.91
SCAMP1-207ENST00000621999 BTF3P20290 206 aaKnown RBP9.34□□□□□ -0.91
SCAMP1-207ENST00000621999 EVI2AP22794 236 aa9.34□□□□□ -0.91
SCAMP1-207ENST00000621999 OR10AG1Q8NH19 301 aa9.34□□□□□ -0.91
SCAMP1-207ENST00000621999 ZNF747Q9BV97 191 aa9.34□□□□□ -0.91
SCAMP1-207ENST00000621999 TRAV9-1A0A075B6T8 112 aa9.33□□□□□ -0.92
SCAMP1-207ENST00000621999 IGHV3-16A0A0C4DH30 117 aa9.33□□□□□ -0.92
SCAMP1-207ENST00000621999 PCP4L1A6NKN8 68 aa9.33□□□□□ -0.92
SCAMP1-207ENST00000621999 H7C1H1 209 aa9.33□□□□□ -0.92
SCAMP1-207ENST00000621999 IGLV1-51P01701 117 aa9.33□□□□□ -0.92
SCAMP1-207ENST00000621999 ZNF80P51504 273 aaPredicted RBP9.33□□□□□ -0.92
SCAMP1-207ENST00000621999 ORMDL3Q8N138 153 aa9.33□□□□□ -0.92
SCAMP1-207ENST00000621999 MYOZ3Q8TDC0 251 aa9.33□□□□□ -0.92
SCAMP1-207ENST00000621999 NOP10Q9NPE3 64 aaKnown RBP9.33□□□□□ -0.92
SCAMP1-207ENST00000621999 MRPL16Q9NX20 251 aaKnown RBP9.33□□□□□ -0.92
SCAMP1-207ENST00000621999 S100A12P80511 92 aa9.33□□□□□ -0.92
SCAMP1-207ENST00000621999 AMN1Q8IY45 258 aa9.33□□□□□ -0.92
SCAMP1-207ENST00000621999 NF1P21359 2839 aa9.32□□□□□ -0.92
SCAMP1-207ENST00000621999 C10orf91Q5T1B1 145 aa9.32□□□□□ -0.92
SCAMP1-207ENST00000621999 MORN3Q6PF18 240 aaPredicted RBP9.32□□□□□ -0.92
SCAMP1-207ENST00000621999 TRBV24-1A0A075B6N3 115 aa9.32□□□□□ -0.92
SCAMP1-207ENST00000621999 AZU1P20160 251 aa9.32□□□□□ -0.92
SCAMP1-207ENST00000621999 ODF3L2Q3SX64 289 aa9.32□□□□□ -0.92
SCAMP1-207ENST00000621999 LINC00322Q6ZN03 302 aaPredicted RBP9.32□□□□□ -0.92
SCAMP1-207ENST00000621999 Q8N1Y9 231 aa9.32□□□□□ -0.92
SCAMP1-207ENST00000621999 OR11H2Q8NH07 326 aa9.32□□□□□ -0.92
SCAMP1-207ENST00000621999 PRSS1P07477 247 aa9.31□□□□□ -0.92
SCAMP1-207ENST00000621999 CT83Q5H943 113 aa9.31□□□□□ -0.92
SCAMP1-207ENST00000621999 KIR2DL4Q99706 377 aa9.31□□□□□ -0.92
SCAMP1-207ENST00000621999 C20orf202A1L168 122 aa9.31□□□□□ -0.92
SCAMP1-207ENST00000621999 SMKR1H3BMG3 65 aa9.31□□□□□ -0.92
SCAMP1-207ENST00000621999 DAD1P61803 113 aa9.31□□□□□ -0.92
SCAMP1-207ENST00000621999 ATP5L2Q7Z4Y8 100 aa9.31□□□□□ -0.92
SCAMP1-207ENST00000621999 COLCA2A8K830 154 aa9.31□□□□□ -0.92
SCAMP1-207ENST00000621999 OR10J3Q5JRS4 329 aa9.31□□□□□ -0.92
SCAMP1-207ENST00000621999 TMEM256Q8N2U0 113 aa9.3□□□□□ -0.92
SCAMP1-207ENST00000621999 GFRA4Q9GZZ7 299 aa9.3□□□□□ -0.92
SCAMP1-207ENST00000621999 DPH3P1Q9H4G8 78 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms