RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 IGHV3-11P01762 117 aa7.14□□□□□ -1.27
PDPN-212ENST00000621990 MED14OSP0DP75 135 aa7.14□□□□□ -1.27
PDPN-212ENST00000621990 PSMG4Q5JS54 123 aa7.14□□□□□ -1.27
PDPN-212ENST00000621990 MRAP2Q96G30 205 aa7.14□□□□□ -1.27
PDPN-212ENST00000621990 UTP20O75691 2785 aaKnown RBP7.14□□□□□ -1.27
PDPN-212ENST00000621990 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.13□□□□□ -1.27
PDPN-212ENST00000621990 A0A096LNT2 108 aa7.13□□□□□ -1.27
PDPN-212ENST00000621990 H3BVH4 76 aa7.13□□□□□ -1.27
PDPN-212ENST00000621990 TAX1BP3O14907 124 aa7.13□□□□□ -1.27
PDPN-212ENST00000621990 SLC25A16P16260 332 aa7.13□□□□□ -1.27
PDPN-212ENST00000621990 PSMB8P28062 276 aa7.13□□□□□ -1.27
PDPN-212ENST00000621990 KIR3DS1Q14943 382 aa7.13□□□□□ -1.27
PDPN-212ENST00000621990 ODF1Q14990 250 aa7.13□□□□□ -1.27
PDPN-212ENST00000621990 SPANXN1Q5VSR9 72 aa7.13□□□□□ -1.27
PDPN-212ENST00000621990 RHPN1-AS1Q9BWJ2 59 aa7.13□□□□□ -1.27
PDPN-212ENST00000621990 TMEM89A2RUT3 159 aa7.12□□□□□ -1.27
PDPN-212ENST00000621990 SIVA1O15304 175 aa7.12□□□□□ -1.27
PDPN-212ENST00000621990 UBE2V1Q13404 147 aa7.12□□□□□ -1.27
PDPN-212ENST00000621990 SAMD13Q5VXD3 122 aa7.12□□□□□ -1.27
PDPN-212ENST00000621990 Q6ZVH6 145 aa7.12□□□□□ -1.27
PDPN-212ENST00000621990 SMPXQ9UHP9 88 aa7.12□□□□□ -1.27
PDPN-212ENST00000621990 TM4SF20Q53R12 229 aa7.12□□□□□ -1.27
PDPN-212ENST00000621990 DKK2Q9UBU2 259 aa7.12□□□□□ -1.27
PDPN-212ENST00000621990 PEF1Q9UBV8 284 aaKnown RBP7.12□□□□□ -1.27
PDPN-212ENST00000621990 FBN2P35556 2912 aa7.11□□□□□ -1.27
PDPN-212ENST00000621990 J3QLI3 93 aa7.11□□□□□ -1.27
PDPN-212ENST00000621990 CCL25O15444 150 aa7.11□□□□□ -1.27
PDPN-212ENST00000621990 CD5LO43866 347 aa7.11□□□□□ -1.27
PDPN-212ENST00000621990 LCNL1Q6ZST4 164 aa7.11□□□□□ -1.27
PDPN-212ENST00000621990 LINC01356Q8N9X3 169 aa7.11□□□□□ -1.27
PDPN-212ENST00000621990 OR9G4Q8NGQ1 327 aa7.11□□□□□ -1.27
PDPN-212ENST00000621990 TMEM158Q8WZ71 300 aa7.11□□□□□ -1.27
PDPN-212ENST00000621990 HHLA3Q9XRX5 114 aa7.11□□□□□ -1.27
PDPN-212ENST00000621990 TRAV26-2A0A0B4J265 109 aa7.11□□□□□ -1.27
PDPN-212ENST00000621990 NXPH4O95158 308 aa7.11□□□□□ -1.27
PDPN-212ENST00000621990 LAGE3Q14657 143 aa7.11□□□□□ -1.27
PDPN-212ENST00000621990 C18orf15Q96N68 181 aa7.11□□□□□ -1.27
PDPN-212ENST00000621990 UFC1Q9Y3C8 167 aa7.11□□□□□ -1.27
PDPN-212ENST00000621990 KLLNB2CW77 178 aa7.1□□□□□ -1.27
PDPN-212ENST00000621990 ATP5LO75964 103 aa7.1□□□□□ -1.27
PDPN-212ENST00000621990 ASIPP42127 132 aa7.1□□□□□ -1.27
PDPN-212ENST00000621990 SEC11AP67812 179 aa7.1□□□□□ -1.27
PDPN-212ENST00000621990 POM121L12Q8N7R1 296 aa7.1□□□□□ -1.27
PDPN-212ENST00000621990 DCANP1Q8TF63 244 aa7.1□□□□□ -1.27
PDPN-212ENST00000621990 SPG11Q96JI7 2443 aa7.1□□□□□ -1.27
PDPN-212ENST00000621990 IGHV4-59P01825 116 aa7.1□□□□□ -1.27
PDPN-212ENST00000621990 SMIM17P0DL12 118 aa7.1□□□□□ -1.27
PDPN-212ENST00000621990 DEFB1P60022 68 aa7.1□□□□□ -1.27
PDPN-212ENST00000621990 ANXA2RQ3ZCQ2 193 aa7.1□□□□□ -1.27
PDPN-212ENST00000621990 WFDC3Q8IUB2 231 aa7.1□□□□□ -1.27
PDPN-212ENST00000621990 UBR5O95071 2799 aaPredicted RBP7.09□□□□□ -1.27
PDPN-212ENST00000621990 F6UB75 175 aa7.09□□□□□ -1.27
PDPN-212ENST00000621990 K7EMI3 77 aa7.09□□□□□ -1.27
PDPN-212ENST00000621990 M0R381 172 aa7.09□□□□□ -1.27
PDPN-212ENST00000621990 RPL11P62913 178 aaKnown RBP7.09□□□□□ -1.27
PDPN-212ENST00000621990 SRSF1Q07955 248 aaKnown RBP eCLIP7.09□□□□□ -1.27
PDPN-212ENST00000621990 DEFB112Q30KQ8 113 aa7.09□□□□□ -1.27
PDPN-212ENST00000621990 TMEM97Q5BJF2 176 aa7.09□□□□□ -1.27
PDPN-212ENST00000621990 ADAMTSL5Q6ZMM2 481 aa7.09□□□□□ -1.27
PDPN-212ENST00000621990 NRGNQ92686 78 aa7.09□□□□□ -1.27
PDPN-212ENST00000621990 C20orf78Q9BR46 151 aa7.09□□□□□ -1.27
PDPN-212ENST00000621990 SMIM2Q9BVW6 85 aa7.09□□□□□ -1.27
PDPN-212ENST00000621990 MYO18BQ8IUG5 2567 aa7.09□□□□□ -1.27
PDPN-212ENST00000621990 RNASE3P12724 160 aaKnown RBP7.09□□□□□ -1.27
PDPN-212ENST00000621990 RNASE4P34096 147 aaKnown RBP7.09□□□□□ -1.27
PDPN-212ENST00000621990 PTTG1IPP53801 180 aa7.09□□□□□ -1.27
PDPN-212ENST00000621990 DPH3P1Q9H4G8 78 aa7.09□□□□□ -1.27
PDPN-212ENST00000621990 FSHBP01225 129 aa7.08□□□□□ -1.28
PDPN-212ENST00000621990 HLA-DRB4P13762 266 aa7.08□□□□□ -1.28
PDPN-212ENST00000621990 RASL10AQ92737 203 aa7.08□□□□□ -1.28
PDPN-212ENST00000621990 HLA-DRB4X5D2U9 266 aa7.08□□□□□ -1.28
PDPN-212ENST00000621990 A1L4Q6 167 aa7.08□□□□□ -1.28
PDPN-212ENST00000621990 CBY3A6NI87 242 aa7.08□□□□□ -1.28
PDPN-212ENST00000621990 RNF223E7ERA6 249 aa7.08□□□□□ -1.28
PDPN-212ENST00000621990 IGKCP01834 107 aa7.08□□□□□ -1.28
PDPN-212ENST00000621990 EDN2P20800 178 aa7.08□□□□□ -1.28
PDPN-212ENST00000621990 HSD52Q0P140 79 aa7.08□□□□□ -1.28
PDPN-212ENST00000621990 PCP2Q8IVA1 136 aa7.08□□□□□ -1.28
PDPN-212ENST00000621990 MYOZ3Q8TDC0 251 aa7.08□□□□□ -1.28
PDPN-212ENST00000621990 ODF3Q96PU9 254 aa7.08□□□□□ -1.28
PDPN-212ENST00000621990 PHLDA3Q9Y5J5 127 aa7.08□□□□□ -1.28
PDPN-212ENST00000621990 DPM2O94777 84 aa7.07□□□□□ -1.28
PDPN-212ENST00000621990 PRSS1P07477 247 aa7.07□□□□□ -1.28
PDPN-212ENST00000621990 S100A4P26447 101 aaKnown RBP7.07□□□□□ -1.28
PDPN-212ENST00000621990 ID1P41134 155 aa7.07□□□□□ -1.28
PDPN-212ENST00000621990 C21orf62-AS1Q17RA5 79 aa7.07□□□□□ -1.28
PDPN-212ENST00000621990 ZANQ9Y493 2812 aa7.07□□□□□ -1.28
PDPN-212ENST00000621990 SUMO2P61956 95 aaKnown RBP7.07□□□□□ -1.28
PDPN-212ENST00000621990 FOXC2Q99958 501 aa7.07□□□□□ -1.28
PDPN-212ENST00000621990 KIF25-AS1Q9Y6Z4 181 aa7.07□□□□□ -1.28
PDPN-212ENST00000621990 A0A087WX48 190 aa7.07□□□□□ -1.28
PDPN-212ENST00000621990 TRAV12-1A0A0B4J245 112 aa7.07□□□□□ -1.28
PDPN-212ENST00000621990 GNRH2O43555 120 aa7.07□□□□□ -1.28
PDPN-212ENST00000621990 ORMDL2Q53FV1 153 aa7.07□□□□□ -1.28
PDPN-212ENST00000621990 AP1S3Q96PC3 154 aa7.07□□□□□ -1.28
PDPN-212ENST00000621990 HIGD1BQ9P298 99 aa7.07□□□□□ -1.28
PDPN-212ENST00000621990 ANKRD17O75179 2603 aaKnown RBP7.06□□□□□ -1.28
PDPN-212ENST00000621990 ACACBO00763 2458 aa7.06□□□□□ -1.28
PDPN-212ENST00000621990 MXRA5Q9NR99 2828 aa7.06□□□□□ -1.28
PDPN-212ENST00000621990 IGKV2D-26A0A0A0MRZ7 120 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms