RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 CAMPP49913 170 aa11.7□□□□□ -0.54
CBWD3-216ENST00000621396 ANXA2RQ3ZCQ2 193 aa11.7□□□□□ -0.54
CBWD3-216ENST00000621396 XCL2Q9UBD3 114 aa11.7□□□□□ -0.54
CBWD3-216ENST00000621396 TP53TG3Q9ULZ0 132 aa11.7□□□□□ -0.54
CBWD3-216ENST00000621396 TRGC2P03986 189 aa11.7□□□□□ -0.54
CBWD3-216ENST00000621396 INSL3P51460 131 aa11.7□□□□□ -0.54
CBWD3-216ENST00000621396 PYGO2Q9BRQ0 406 aa11.7□□□□□ -0.54
CBWD3-216ENST00000621396 TRAV21A0A0B4J279 112 aa11.69□□□□□ -0.54
CBWD3-216ENST00000621396 ZNF324O75467 553 aaPredicted RBP11.69□□□□□ -0.54
CBWD3-216ENST00000621396 LURAP1LQ8IV03 231 aa11.69□□□□□ -0.54
CBWD3-216ENST00000621396 OR2K2Q8NGT1 345 aa11.69□□□□□ -0.54
CBWD3-216ENST00000621396 BTF3L4Q96K17 158 aa11.69□□□□□ -0.54
CBWD3-216ENST00000621396 C7orf71A4D174 169 aa11.69□□□□□ -0.54
CBWD3-216ENST00000621396 ARMS2P0C7Q2 107 aa11.69□□□□□ -0.54
CBWD3-216ENST00000621396 CT83Q5H943 113 aa11.69□□□□□ -0.54
CBWD3-216ENST00000621396 LYZL1Q6UWQ5 148 aa11.69□□□□□ -0.54
CBWD3-216ENST00000621396 NBEAL1Q6ZS30 2694 aa11.69□□□□□ -0.54
CBWD3-216ENST00000621396 LINC01559Q495D7 138 aa11.68□□□□□ -0.54
CBWD3-216ENST00000621396 Q6AWC8 147 aa11.68□□□□□ -0.54
CBWD3-216ENST00000621396 LEPP41159 167 aa11.68□□□□□ -0.54
CBWD3-216ENST00000621396 RAB4BP61018 213 aa11.68□□□□□ -0.54
CBWD3-216ENST00000621396 SSBP4Q9BWG4 385 aaPredicted RBP11.68□□□□□ -0.54
CBWD3-216ENST00000621396 MGAM2Q2M2H8 2515 aa11.67□□□□□ -0.54
CBWD3-216ENST00000621396 TRPT1Q86TN4 253 aaKnown RBP11.67□□□□□ -0.54
CBWD3-216ENST00000621396 GTSCR1Q86UQ5 136 aa11.67□□□□□ -0.54
CBWD3-216ENST00000621396 IGHV3OR16-12A0A075B7B8 117 aa11.67□□□□□ -0.54
CBWD3-216ENST00000621396 FOXA3P55318 350 aaPredicted RBP11.67□□□□□ -0.54
CBWD3-216ENST00000621396 FRZBQ92765 325 aa11.67□□□□□ -0.54
CBWD3-216ENST00000621396 MSRB1Q9NZV6 116 aa11.67□□□□□ -0.54
CBWD3-216ENST00000621396 TRBV7-9A0A0J9YWB2 115 aa11.66□□□□□ -0.54
CBWD3-216ENST00000621396 H3BVH4 76 aa11.66□□□□□ -0.54
CBWD3-216ENST00000621396 TSPOP30536 169 aa11.66□□□□□ -0.54
CBWD3-216ENST00000621396 FABP9Q0Z7S8 132 aa11.66□□□□□ -0.54
CBWD3-216ENST00000621396 FAM159AQ6UWV7 190 aa11.66□□□□□ -0.54
CBWD3-216ENST00000621396 FER1L6-AS1Q8NA97 138 aa11.66□□□□□ -0.54
CBWD3-216ENST00000621396 ODF3Q96PU9 254 aa11.66□□□□□ -0.54
CBWD3-216ENST00000621396 MCRIP2Q9BUT9 160 aaKnown RBP11.66□□□□□ -0.54
CBWD3-216ENST00000621396 GFRA4Q9GZZ7 299 aa11.66□□□□□ -0.54
CBWD3-216ENST00000621396 SNURFLB1AK76 121 aa11.65□□□□□ -0.54
CBWD3-216ENST00000621396 XKRY2A2RUG3 117 aa11.65□□□□□ -0.55
CBWD3-216ENST00000621396 A8MTW9 85 aa11.65□□□□□ -0.55
CBWD3-216ENST00000621396 G3V4G9 280 aa11.64□□□□□ -0.55
CBWD3-216ENST00000621396 TYMSP04818 313 aa11.64□□□□□ -0.55
CBWD3-216ENST00000621396 IGLC6P0CF74 106 aa11.64□□□□□ -0.55
CBWD3-216ENST00000621396 KRTAP10-11P60412 298 aa11.64□□□□□ -0.55
CBWD3-216ENST00000621396 KIAA1644Q3SXP7 199 aa11.64□□□□□ -0.55
CBWD3-216ENST00000621396 Q8N1Y9 231 aa11.64□□□□□ -0.55
CBWD3-216ENST00000621396 OR10AG1Q8NH19 301 aa11.64□□□□□ -0.55
CBWD3-216ENST00000621396 SRD5A3Q9H8P0 318 aa11.64□□□□□ -0.55
CBWD3-216ENST00000621396 MDFICQ9P1T7 246 aa11.64□□□□□ -0.55
CBWD3-216ENST00000621396 GIG44P09565 113 aaPredicted RBP11.64□□□□□ -0.55
CBWD3-216ENST00000621396 NTF3P20783 257 aa11.64□□□□□ -0.55
CBWD3-216ENST00000621396 S100A4P26447 101 aaKnown RBP11.64□□□□□ -0.55
CBWD3-216ENST00000621396 TRAPPC1Q9Y5R8 145 aa11.64□□□□□ -0.55
CBWD3-216ENST00000621396 A0A1B0GUT8 65 aa11.62□□□□□ -0.55
CBWD3-216ENST00000621396 FAM231BA6NCW3 169 aa11.62□□□□□ -0.55
CBWD3-216ENST00000621396 RNASE3P12724 160 aaKnown RBP11.62□□□□□ -0.55
CBWD3-216ENST00000621396 SLAQ13239 276 aa11.62□□□□□ -0.55
CBWD3-216ENST00000621396 TWIST1Q15672 202 aa11.62□□□□□ -0.55
CBWD3-216ENST00000621396 TMEM136Q6ZRR5 245 aa11.62□□□□□ -0.55
CBWD3-216ENST00000621396 A0A1B0GXF2 115 aa11.61□□□□□ -0.55
CBWD3-216ENST00000621396 LINC01587Q99440 93 aa11.61□□□□□ -0.55
CBWD3-216ENST00000621396 FAM110AQ9BQ89 295 aa11.61□□□□□ -0.55
CBWD3-216ENST00000621396 CBY3A6NI87 242 aa11.61□□□□□ -0.55
CBWD3-216ENST00000621396 M0R381 172 aa11.61□□□□□ -0.55
CBWD3-216ENST00000621396 RPS20P60866 119 aaKnown RBP11.61□□□□□ -0.55
CBWD3-216ENST00000621396 HBBP68871 147 aa11.61□□□□□ -0.55
CBWD3-216ENST00000621396 TMEM208Q9BTX3 173 aa11.61□□□□□ -0.55
CBWD3-216ENST00000621396 MRPL18Q9H0U6 180 aaKnown RBP11.61□□□□□ -0.55
CBWD3-216ENST00000621396 TRAV9-1A0A075B6T8 112 aa11.6□□□□□ -0.55
CBWD3-216ENST00000621396 IGHV1OR15-1A0A075B7D0 117 aa11.6□□□□□ -0.55
CBWD3-216ENST00000621396 PHOX2AO14813 284 aa11.6□□□□□ -0.55
CBWD3-216ENST00000621396 CMC4P56277 68 aaPredicted RBP11.6□□□□□ -0.55
CBWD3-216ENST00000621396 NUTF2P61970 127 aaKnown RBP11.6□□□□□ -0.55
CBWD3-216ENST00000621396 C1orf158Q8N1D5 194 aa11.6□□□□□ -0.55
CBWD3-216ENST00000621396 DNHD1Q96M86 4753 aa11.6□□□□□ -0.55
CBWD3-216ENST00000621396 C1orf196B1AJZ1 125 aa11.6□□□□□ -0.55
CBWD3-216ENST00000621396 PRB2P02812 416 aaPredicted RBP11.6□□□□□ -0.55
CBWD3-216ENST00000621396 ASIPP42127 132 aa11.6□□□□□ -0.55
CBWD3-216ENST00000621396 MUC4Q99102 2169 aa11.6□□□□□ -0.55
CBWD3-216ENST00000621396 TRGC1P0CF51 173 aa11.59□□□□□ -0.55
CBWD3-216ENST00000621396 AZU1P20160 251 aa11.59□□□□□ -0.55
CBWD3-216ENST00000621396 CTRLP40313 264 aa11.59□□□□□ -0.55
CBWD3-216ENST00000621396 WIPF1O43516 503 aa11.59□□□□□ -0.55
CBWD3-216ENST00000621396 INSP01308 110 aa11.59□□□□□ -0.55
CBWD3-216ENST00000621396 DMRTA1Q5VZB9 504 aa11.59□□□□□ -0.55
CBWD3-216ENST00000621396 SPANXN1Q5VSR9 72 aa11.58□□□□□ -0.56
CBWD3-216ENST00000621396 BORCS7Q96B45 105 aa11.58□□□□□ -0.56
CBWD3-216ENST00000621396 GNB1LQ9BYB4 327 aa11.58□□□□□ -0.56
CBWD3-216ENST00000621396 PHLDA3Q9Y5J5 127 aa11.58□□□□□ -0.56
CBWD3-216ENST00000621396 HIST1H2BKO60814 126 aa11.58□□□□□ -0.56
CBWD3-216ENST00000621396 HIST1H2BJP06899 126 aa11.58□□□□□ -0.56
CBWD3-216ENST00000621396 EVI2AP22794 236 aa11.58□□□□□ -0.56
CBWD3-216ENST00000621396 HIST1H2BOP23527 126 aa11.58□□□□□ -0.56
CBWD3-216ENST00000621396 HIST1H2BBP33778 126 aa11.58□□□□□ -0.56
CBWD3-216ENST00000621396 HIST1H2BDP58876 126 aa11.58□□□□□ -0.56
CBWD3-216ENST00000621396 HIST1H2BCP62807 126 aa11.58□□□□□ -0.56
CBWD3-216ENST00000621396 HIST2H2BEQ16778 126 aa11.58□□□□□ -0.56
CBWD3-216ENST00000621396 TDRG1Q3Y452 100 aa11.58□□□□□ -0.56
CBWD3-216ENST00000621396 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms