RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 AMN1Q8IY45 258 aa6.53□□□□□ -1.36
PTPDC1-204ENST00000620992 NUP35Q8NFH5 326 aa6.53□□□□□ -1.36
PTPDC1-204ENST00000620992 TSKUQ8WUA8 353 aa6.53□□□□□ -1.36
PTPDC1-204ENST00000620992 TRAV2A0A0B4J234 112 aa6.53□□□□□ -1.36
PTPDC1-204ENST00000620992 SMIM27A0A1W2PRY6 76 aa6.53□□□□□ -1.36
PTPDC1-204ENST00000620992 SMIM13P0DJ93 91 aa6.53□□□□□ -1.36
PTPDC1-204ENST00000620992 ESDP10768 282 aa6.53□□□□□ -1.36
PTPDC1-204ENST00000620992 LINC00158P58513 81 aa6.53□□□□□ -1.36
PTPDC1-204ENST00000620992 PATE2Q6UY27 113 aa6.53□□□□□ -1.36
PTPDC1-204ENST00000620992 RITA1Q96K30 269 aa6.53□□□□□ -1.36
PTPDC1-204ENST00000620992 HELZ2Q9BYK8 2649 aaKnown RBP6.53□□□□□ -1.36
PTPDC1-204ENST00000620992 A0A0J9YY99 117 aa6.53□□□□□ -1.36
PTPDC1-204ENST00000620992 OOSP1A8MZH6 123 aa6.53□□□□□ -1.36
PTPDC1-204ENST00000620992 OVOL1O14753 267 aa6.53□□□□□ -1.36
PTPDC1-204ENST00000620992 DEFB1P60022 68 aa6.53□□□□□ -1.36
PTPDC1-204ENST00000620992 STAB1Q9NY15 2570 aa6.52□□□□□ -1.37
PTPDC1-204ENST00000620992 C18orf32Q8TCD1 76 aa6.52□□□□□ -1.37
PTPDC1-204ENST00000620992 TRBV7-1A0A0A6YYK4 115 aa6.52□□□□□ -1.37
PTPDC1-204ENST00000620992 DEFB113Q30KQ7 82 aa6.52□□□□□ -1.37
PTPDC1-204ENST00000620992 MAJINQ3KP22 176 aa6.52□□□□□ -1.37
PTPDC1-204ENST00000620992 TEX36Q5VZQ5 186 aa6.52□□□□□ -1.37
PTPDC1-204ENST00000620992 APRG1Q8IVJ8 170 aa6.52□□□□□ -1.37
PTPDC1-204ENST00000620992 Q8NA96 180 aa6.52□□□□□ -1.37
PTPDC1-204ENST00000620992 MRPL16Q9NX20 251 aaKnown RBP6.52□□□□□ -1.37
PTPDC1-204ENST00000620992 C19orf84I3L1E1 186 aa6.52□□□□□ -1.37
PTPDC1-204ENST00000620992 HOXD3P31249 432 aaPredicted RBP6.52□□□□□ -1.37
PTPDC1-204ENST00000620992 RPL36AP83881 106 aaKnown RBP6.52□□□□□ -1.37
PTPDC1-204ENST00000620992 RPL36ALQ969Q0 106 aaKnown RBP6.52□□□□□ -1.37
PTPDC1-204ENST00000620992 USMG5Q96IX5 58 aa6.52□□□□□ -1.37
PTPDC1-204ENST00000620992 UQCR10Q9UDW1 63 aa6.52□□□□□ -1.37
PTPDC1-204ENST00000620992 CYSLTR1Q9Y271 337 aa6.52□□□□□ -1.37
PTPDC1-204ENST00000620992 TMEM238LA0A1B0GVL6 79 aa6.51□□□□□ -1.37
PTPDC1-204ENST00000620992 A6NJY4 79 aa6.51□□□□□ -1.37
PTPDC1-204ENST00000620992 NPSP0C0P6 89 aa6.51□□□□□ -1.37
PTPDC1-204ENST00000620992 COL5A1-AS1Q5SY13 56 aa6.51□□□□□ -1.37
PTPDC1-204ENST00000620992 BCL6BQ8N143 479 aaPredicted RBP6.51□□□□□ -1.37
PTPDC1-204ENST00000620992 SH2D1AO60880 128 aa6.51□□□□□ -1.37
PTPDC1-204ENST00000620992 PSG3Q16557 428 aa6.51□□□□□ -1.37
PTPDC1-204ENST00000620992 FXYD5Q96DB9 178 aa6.51□□□□□ -1.37
PTPDC1-204ENST00000620992 C17orf77Q96MU5 243 aa6.51□□□□□ -1.37
PTPDC1-204ENST00000620992 NOTCH1P46531 2555 aa6.51□□□□□ -1.37
PTPDC1-204ENST00000620992 FABP2P12104 132 aa6.51□□□□□ -1.37
PTPDC1-204ENST00000620992 TMEM213A2RRL7 107 aa6.51□□□□□ -1.37
PTPDC1-204ENST00000620992 DLEU1O43261 78 aa6.51□□□□□ -1.37
PTPDC1-204ENST00000620992 HOXB4P17483 251 aaPredicted RBP6.51□□□□□ -1.37
PTPDC1-204ENST00000620992 SLURP1P55000 103 aa6.51□□□□□ -1.37
PTPDC1-204ENST00000620992 C9orf139Q6ZV77 190 aa6.51□□□□□ -1.37
PTPDC1-204ENST00000620992 NIT1Q86X76 327 aa6.51□□□□□ -1.37
PTPDC1-204ENST00000620992 IGKV1D-37A0A075B6S9 117 aa6.5□□□□□ -1.37
PTPDC1-204ENST00000620992 DAD1P61803 113 aa6.5□□□□□ -1.37
PTPDC1-204ENST00000620992 TRGV9Q99603 122 aa6.5□□□□□ -1.37
PTPDC1-204ENST00000620992 PRADC1Q9BSG0 188 aa6.5□□□□□ -1.37
PTPDC1-204ENST00000620992 NHP2Q9NX24 153 aaKnown RBP6.5□□□□□ -1.37
PTPDC1-204ENST00000620992 TRGV11A0A075B6L2 103 aa6.5□□□□□ -1.37
PTPDC1-204ENST00000620992 RNASE13Q5GAN3 156 aaKnown RBP6.5□□□□□ -1.37
PTPDC1-204ENST00000620992 GDF5OSQ5U4N7 250 aa6.5□□□□□ -1.37
PTPDC1-204ENST00000620992 TTC9CQ8N5M4 171 aa6.5□□□□□ -1.37
PTPDC1-204ENST00000620992 WFDC11Q8NEX6 87 aa6.5□□□□□ -1.37
PTPDC1-204ENST00000620992 LINC00574Q9H8X3 128 aa6.5□□□□□ -1.37
PTPDC1-204ENST00000620992 Q9HAA7 133 aa6.5□□□□□ -1.37
PTPDC1-204ENST00000620992 PAX4O43316 350 aa6.5□□□□□ -1.37
PTPDC1-204ENST00000620992 CKS1BP61024 79 aa6.5□□□□□ -1.37
PTPDC1-204ENST00000620992 C6orf226Q5I0X4 101 aa6.5□□□□□ -1.37
PTPDC1-204ENST00000620992 LINC01619G3V211 115 aa6.49□□□□□ -1.37
PTPDC1-204ENST00000620992 INSP01308 110 aa6.49□□□□□ -1.37
PTPDC1-204ENST00000620992 HBDP02042 147 aa6.49□□□□□ -1.37
PTPDC1-204ENST00000620992 C8orf49Q96NF6 230 aa6.49□□□□□ -1.37
PTPDC1-204ENST00000620992 CSTL1Q9H114 145 aa6.49□□□□□ -1.37
PTPDC1-204ENST00000620992 ATMQ13315 3056 aa6.49□□□□□ -1.37
PTPDC1-204ENST00000620992 TRAV26-2A0A0B4J265 109 aa6.49□□□□□ -1.37
PTPDC1-204ENST00000620992 SPXQ9BT56 116 aa6.49□□□□□ -1.37
PTPDC1-204ENST00000620992 LAMTOR2Q9Y2Q5 125 aa6.49□□□□□ -1.37
PTPDC1-204ENST00000620992 IGLC2P0DOY2 106 aa6.49□□□□□ -1.37
PTPDC1-204ENST00000620992 IGLC3P0DOY3 106 aa6.49□□□□□ -1.37
PTPDC1-204ENST00000620992 PLP1P60201 277 aa6.49□□□□□ -1.37
PTPDC1-204ENST00000620992 Q8N976 141 aa6.49□□□□□ -1.37
PTPDC1-204ENST00000620992 VWC2LB2RUY7 222 aa6.49□□□□□ -1.37
PTPDC1-204ENST00000620992 H3BRM9 83 aa6.49□□□□□ -1.37
PTPDC1-204ENST00000620992 IFI27L1Q96BM0 104 aa6.49□□□□□ -1.37
PTPDC1-204ENST00000620992 GATA3P23771 443 aa6.48□□□□□ -1.37
PTPDC1-204ENST00000620992 SRSF1Q07955 248 aaKnown RBP eCLIP6.48□□□□□ -1.37
PTPDC1-204ENST00000620992 LINC00322Q6ZN03 302 aaPredicted RBP6.48□□□□□ -1.37
PTPDC1-204ENST00000620992 RNF5Q99942 180 aa6.48□□□□□ -1.37
PTPDC1-204ENST00000620992 ALKBH7Q9BT30 221 aaPredicted RBP6.48□□□□□ -1.37
PTPDC1-204ENST00000620992 JPT2Q9H910 190 aa6.48□□□□□ -1.37
PTPDC1-204ENST00000620992 TACC2O95359 2948 aa6.48□□□□□ -1.37
PTPDC1-204ENST00000620992 IGLC7A0M8Q6 106 aa6.48□□□□□ -1.37
PTPDC1-204ENST00000620992 NXPH4O95158 308 aa6.48□□□□□ -1.37
PTPDC1-204ENST00000620992 FAM231DQ6ZW35 169 aa6.48□□□□□ -1.37
PTPDC1-204ENST00000620992 STPG4Q8N801 248 aa6.48□□□□□ -1.37
PTPDC1-204ENST00000620992 CENPVL3A0A0U1RRI6 287 aa6.48□□□□□ -1.37
PTPDC1-204ENST00000620992 ZNF815PA8K554 130 aa6.48□□□□□ -1.37
PTPDC1-204ENST00000620992 CCL24O00175 119 aa6.48□□□□□ -1.37
PTPDC1-204ENST00000620992 Q6ZVH6 145 aa6.48□□□□□ -1.37
PTPDC1-204ENST00000620992 OR5A1Q8NGJ0 315 aa6.48□□□□□ -1.37
PTPDC1-204ENST00000620992 PGPEP1Q9NXJ5 209 aa6.48□□□□□ -1.37
PTPDC1-204ENST00000620992 MRPL27Q9P0M9 148 aaKnown RBP6.48□□□□□ -1.37
PTPDC1-204ENST00000620992 THAP8Q8NA92 274 aa6.47□□□□□ -1.37
PTPDC1-204ENST00000620992 ZNRF2Q8NHG8 242 aa6.47□□□□□ -1.37
PTPDC1-204ENST00000620992 CST9LQ9H4G1 147 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms