RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 IGLV3-12A0A075B6K2 115 aa5.75□□□□□ -1.49
COLCA1-205ENST00000620864 TRBV10-2A0A0K0K1G8 114 aa5.75□□□□□ -1.49
COLCA1-205ENST00000620864 DAD1P61803 113 aa5.75□□□□□ -1.49
COLCA1-205ENST00000620864 Q8TAT8 98 aa5.75□□□□□ -1.49
COLCA1-205ENST00000620864 BUB1B-PAK6H3BSN5 160 aa5.75□□□□□ -1.49
COLCA1-205ENST00000620864 C4orf51C9J302 202 aa5.75□□□□□ -1.49
COLCA1-205ENST00000620864 K7EM74 188 aa5.75□□□□□ -1.49
COLCA1-205ENST00000620864 GATA3P23771 443 aa5.75□□□□□ -1.49
COLCA1-205ENST00000620864 UBE2AP49459 152 aa5.75□□□□□ -1.49
COLCA1-205ENST00000620864 Q6ZUT4 128 aa5.75□□□□□ -1.49
COLCA1-205ENST00000620864 C10orf105Q8TEF2 133 aa5.75□□□□□ -1.49
COLCA1-205ENST00000620864 RHPN1-AS1Q9BWJ2 59 aa5.75□□□□□ -1.49
COLCA1-205ENST00000620864 PNRC2Q9NPJ4 139 aaKnown RBP5.75□□□□□ -1.49
COLCA1-205ENST00000620864 MYOFQ9NZM1 2061 aa5.75□□□□□ -1.49
COLCA1-205ENST00000620864 ZNF134P52741 427 aa5.75□□□□□ -1.49
COLCA1-205ENST00000620864 ZNF747Q9BV97 191 aa5.75□□□□□ -1.49
COLCA1-205ENST00000620864 K7ERJ3 54 aa5.74□□□□□ -1.49
COLCA1-205ENST00000620864 IGKV1D-8A0A087WSZ0 117 aa5.74□□□□□ -1.49
COLCA1-205ENST00000620864 PRR25Q96S07 402 aa5.74□□□□□ -1.49
COLCA1-205ENST00000620864 SLX1AQ9BQ83 275 aa5.74□□□□□ -1.49
COLCA1-205ENST00000620864 QRFPP83859 136 aa5.74□□□□□ -1.49
COLCA1-205ENST00000620864 RNF144BQ7Z419 303 aa5.74□□□□□ -1.49
COLCA1-205ENST00000620864 FAM236DA0A1B0GTK5 79 aa5.74□□□□□ -1.49
COLCA1-205ENST00000620864 CRYGCP07315 174 aa5.74□□□□□ -1.49
COLCA1-205ENST00000620864 FAM236CP0DP71 79 aa5.74□□□□□ -1.49
COLCA1-205ENST00000620864 ANKRD39Q53RE8 183 aa5.74□□□□□ -1.49
COLCA1-205ENST00000620864 TMEM200BQ69YZ2 307 aa5.74□□□□□ -1.49
COLCA1-205ENST00000620864 PIFOQ8TCI5 191 aa5.74□□□□□ -1.49
COLCA1-205ENST00000620864 HIGD2BQ4VC39 106 aa5.74□□□□□ -1.49
COLCA1-205ENST00000620864 PRSS57Q6UWY2 283 aa5.74□□□□□ -1.49
COLCA1-205ENST00000620864 APOC4P55056 127 aa5.73□□□□□ -1.49
COLCA1-205ENST00000620864 K7EN84 100 aa5.73□□□□□ -1.49
COLCA1-205ENST00000620864 DYNAPQ8N1N2 210 aa5.73□□□□□ -1.49
COLCA1-205ENST00000620864 PTH2Q96A98 100 aa5.73□□□□□ -1.49
COLCA1-205ENST00000620864 C14orf132Q9NPU4 83 aa5.73□□□□□ -1.49
COLCA1-205ENST00000620864 TMEM213A2RRL7 107 aa5.73□□□□□ -1.49
COLCA1-205ENST00000620864 IGHV1-46P01743 117 aa5.73□□□□□ -1.49
COLCA1-205ENST00000620864 CRYGBP07316 175 aa5.73□□□□□ -1.49
COLCA1-205ENST00000620864 TMEM178BH3BS89 294 aa5.73□□□□□ -1.49
COLCA1-205ENST00000620864 PAX9P55771 341 aa5.73□□□□□ -1.49
COLCA1-205ENST00000620864 VWC2Q2TAL6 325 aa5.73□□□□□ -1.49
COLCA1-205ENST00000620864 AMTNQ6UX39 209 aa5.73□□□□□ -1.49
COLCA1-205ENST00000620864 FNDC1Q4ZHG4 1894 aaPredicted RBP5.73□□□□□ -1.49
COLCA1-205ENST00000620864 LYPD3O95274 346 aa5.73□□□□□ -1.49
COLCA1-205ENST00000620864 SPRR3Q9UBC9 169 aa5.73□□□□□ -1.49
COLCA1-205ENST00000620864 NDUFA4O00483 81 aa5.73□□□□□ -1.49
COLCA1-205ENST00000620864 NDUFV3P56181 108 aaKnown RBP5.73□□□□□ -1.49
COLCA1-205ENST00000620864 ZNF672Q499Z4 452 aaPredicted RBP5.73□□□□□ -1.49
COLCA1-205ENST00000620864 PLA2G2EQ9NZK7 142 aa5.73□□□□□ -1.49
COLCA1-205ENST00000620864 HIST2H2BCQ6DN03 193 aa5.72□□□□□ -1.49
COLCA1-205ENST00000620864 A0A0G2JNJ9 132 aa5.72□□□□□ -1.49
COLCA1-205ENST00000620864 H3BRN7 92 aa5.72□□□□□ -1.49
COLCA1-205ENST00000620864 LTAP01374 205 aa5.72□□□□□ -1.49
COLCA1-205ENST00000620864 IMUPQ9GZP8 106 aa5.72□□□□□ -1.49
COLCA1-205ENST00000620864 Q9UFV3 132 aa5.72□□□□□ -1.49
COLCA1-205ENST00000620864 TRAV3A0A0B4J244 114 aa5.72□□□□□ -1.49
COLCA1-205ENST00000620864 A0A1B0GUS0 222 aa5.72□□□□□ -1.49
COLCA1-205ENST00000620864 PLA2G2CQ5R387 149 aa5.72□□□□□ -1.49
COLCA1-205ENST00000620864 Q6P435 159 aa5.72□□□□□ -1.49
COLCA1-205ENST00000620864 THSD7BQ9C0I4 1608 aa5.72□□□□□ -1.49
COLCA1-205ENST00000620864 COL4A6Q14031 1691 aa5.72□□□□□ -1.49
COLCA1-205ENST00000620864 ETDCA0A1B0GVM5 59 aa5.72□□□□□ -1.49
COLCA1-205ENST00000620864 MBD3L4A6NDZ8 208 aaPredicted RBP5.72□□□□□ -1.49
COLCA1-205ENST00000620864 MBD3L3A6NE82 208 aaPredicted RBP5.72□□□□□ -1.49
COLCA1-205ENST00000620864 MBD3L5A6NJ08 208 aaPredicted RBP5.72□□□□□ -1.49
COLCA1-205ENST00000620864 MBD3L2Q8NHZ7 208 aaPredicted RBP5.72□□□□□ -1.49
COLCA1-205ENST00000620864 NDUFA4L2Q9NRX3 87 aa5.72□□□□□ -1.49
COLCA1-205ENST00000620864 IGHV1-18A0A0C4DH31 117 aa5.72□□□□□ -1.49
COLCA1-205ENST00000620864 IGKV1-12A0A0C4DH73 117 aa5.72□□□□□ -1.49
COLCA1-205ENST00000620864 IGKV1D-12P01611 117 aa5.72□□□□□ -1.49
COLCA1-205ENST00000620864 USF3Q68DE3 2245 aa5.72□□□□□ -1.49
COLCA1-205ENST00000620864 CDPF1Q6NVV7 123 aa5.72□□□□□ -1.49
COLCA1-205ENST00000620864 ALPK3Q96L96 1907 aa5.72□□□□□ -1.49
COLCA1-205ENST00000620864 H3BUA1 57 aa5.71□□□□□ -1.49
COLCA1-205ENST00000620864 C3orf22Q8N5N4 141 aa5.71□□□□□ -1.49
COLCA1-205ENST00000620864 PKDREJQ9NTG1 2253 aa5.71□□□□□ -1.5
COLCA1-205ENST00000620864 C5orf63A6NC05 138 aa5.71□□□□□ -1.5
COLCA1-205ENST00000620864 MRPS36P82909 103 aaKnown RBP5.71□□□□□ -1.5
COLCA1-205ENST00000620864 PTPRDP23468 1912 aa5.71□□□□□ -1.5
COLCA1-205ENST00000620864 MRPL36Q9P0J6 103 aaKnown RBP5.71□□□□□ -1.5
COLCA1-205ENST00000620864 PRR14LQ5THK1 2151 aa5.71□□□□□ -1.5
COLCA1-205ENST00000620864 ROS1P08922 2347 aa5.71□□□□□ -1.5
COLCA1-205ENST00000620864 LINC00473A8K010 186 aa5.7□□□□□ -1.5
COLCA1-205ENST00000620864 Q9H8V8 135 aa5.7□□□□□ -1.5
COLCA1-205ENST00000620864 TRBV12-3P01733 135 aa5.7□□□□□ -1.5
COLCA1-205ENST00000620864 ZC2HC1AQ96GY0 325 aa5.7□□□□□ -1.5
COLCA1-205ENST00000620864 CENPVL3A0A0U1RRI6 287 aa5.7□□□□□ -1.5
COLCA1-205ENST00000620864 CFHR3Q02985 330 aa5.7□□□□□ -1.5
COLCA1-205ENST00000620864 DKK2Q9UBU2 259 aa5.7□□□□□ -1.5
COLCA1-205ENST00000620864 LGALS9O00182 355 aa5.7□□□□□ -1.5
COLCA1-205ENST00000620864 GREB1Q4ZG55 1949 aa5.7□□□□□ -1.5
COLCA1-205ENST00000620864 DAZ2Q13117 558 aaKnown RBP5.7□□□□□ -1.5
COLCA1-205ENST00000620864 DAZ4Q86SG3 579 aaKnown RBP5.7□□□□□ -1.5
COLCA1-205ENST00000620864 C8orf49Q96NF6 230 aa5.7□□□□□ -1.5
COLCA1-205ENST00000620864 DAZ3Q9NR90 486 aaKnown RBP5.7□□□□□ -1.5
COLCA1-205ENST00000620864 MLST8Q9BVC4 326 aa5.7□□□□□ -1.5
COLCA1-205ENST00000620864 BPESC1Q9GZL8 116 aa5.7□□□□□ -1.5
COLCA1-205ENST00000620864 SND1-IT1Q9HBX3 110 aa5.7□□□□□ -1.5
COLCA1-205ENST00000620864 BUB3O43684 328 aa5.7□□□□□ -1.5
COLCA1-205ENST00000620864 C5orf24Q7Z6I8 188 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms