RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 NUDT11Q96G61 164 aa11.71□□□□□ -0.53
CD40-207ENST00000620709 LINC00477Q96M19 166 aa11.71□□□□□ -0.53
CD40-207ENST00000620709 IL36BQ9NZH7 164 aa11.71□□□□□ -0.53
CD40-207ENST00000620709 LENEPQ9Y5L5 61 aa11.71□□□□□ -0.53
CD40-207ENST00000620709 PFN1P07737 140 aaKnown RBP11.7□□□□□ -0.54
CD40-207ENST00000620709 HIST1H1AQ02539 215 aaPredicted RBP11.7□□□□□ -0.54
CD40-207ENST00000620709 SMUG1Q53HV7 270 aa11.7□□□□□ -0.54
CD40-207ENST00000620709 ACTL10Q5JWF8 245 aa11.7□□□□□ -0.54
CD40-207ENST00000620709 OR4B1Q8NGF8 309 aa11.7□□□□□ -0.54
CD40-207ENST00000620709 RPP21Q9H633 154 aaKnown RBP11.7□□□□□ -0.54
CD40-207ENST00000620709 AGRNO00468 2067 aa11.69□□□□□ -0.54
CD40-207ENST00000620709 F6UB75 175 aa11.69□□□□□ -0.54
CD40-207ENST00000620709 ZNF705DP0CH99 300 aaPredicted RBP11.69□□□□□ -0.54
CD40-207ENST00000620709 ZNF705BP0CI00 300 aaPredicted RBP11.69□□□□□ -0.54
CD40-207ENST00000620709 DEFB1P60022 68 aa11.69□□□□□ -0.54
CD40-207ENST00000620709 CT83Q5H943 113 aa11.69□□□□□ -0.54
CD40-207ENST00000620709 FAM162BQ5T6X4 162 aa11.69□□□□□ -0.54
CD40-207ENST00000620709 C11orf68Q9H3H3 251 aaKnown RBP11.69□□□□□ -0.54
CD40-207ENST00000620709 TRBV24-1A0A075B6N3 115 aa11.68□□□□□ -0.54
CD40-207ENST00000620709 TGIF2-C20orf24A0A0A6YYL0 155 aa11.68□□□□□ -0.54
CD40-207ENST00000620709 TRBV7-9A0A0J9YWB2 115 aa11.68□□□□□ -0.54
CD40-207ENST00000620709 A0A1W2PPQ1 181 aa11.68□□□□□ -0.54
CD40-207ENST00000620709 TRPT1Q86TN4 253 aaKnown RBP11.68□□□□□ -0.54
CD40-207ENST00000620709 BTF3L4Q96K17 158 aa11.68□□□□□ -0.54
CD40-207ENST00000620709 KMT2AQ03164 3969 aa11.67□□□□□ -0.54
CD40-207ENST00000620709 TRAV9-1A0A075B6T8 112 aa11.67□□□□□ -0.54
CD40-207ENST00000620709 CRIP1P50238 77 aa11.67□□□□□ -0.54
CD40-207ENST00000620709 EBLN2Q6P2I7 272 aa11.67□□□□□ -0.54
CD40-207ENST00000620709 FOXI2Q6ZQN5 318 aa11.67□□□□□ -0.54
CD40-207ENST00000620709 A0A0J9YX75 114 aa11.66□□□□□ -0.54
CD40-207ENST00000620709 A8MWL6 223 aa11.66□□□□□ -0.54
CD40-207ENST00000620709 SH2D1AO60880 128 aa11.66□□□□□ -0.54
CD40-207ENST00000620709 DUSP14O95147 198 aaKnown RBP11.66□□□□□ -0.54
CD40-207ENST00000620709 CXCL1P09341 107 aa11.66□□□□□ -0.54
CD40-207ENST00000620709 RAB5AP20339 215 aa11.66□□□□□ -0.54
CD40-207ENST00000620709 FAM3BP58499 235 aaPredicted RBP11.66□□□□□ -0.54
CD40-207ENST00000620709 MORN3Q6PF18 240 aaPredicted RBP11.66□□□□□ -0.54
CD40-207ENST00000620709 TSKUQ8WUA8 353 aa11.66□□□□□ -0.54
CD40-207ENST00000620709 FAM210BQ96KR6 192 aa11.66□□□□□ -0.54
CD40-207ENST00000620709 PYGO2Q9BRQ0 406 aa11.66□□□□□ -0.54
CD40-207ENST00000620709 FRAS1Q86XX4 4008 aa11.66□□□□□ -0.54
CD40-207ENST00000620709 SMIM27A0A1W2PRY6 76 aa11.65□□□□□ -0.54
CD40-207ENST00000620709 OR2D3Q8NGH3 330 aa11.65□□□□□ -0.54
CD40-207ENST00000620709 ODF3Q96PU9 254 aa11.65□□□□□ -0.54
CD40-207ENST00000620709 SAV1Q9H4B6 383 aaPredicted RBP11.65□□□□□ -0.54
CD40-207ENST00000620709 IGHV4-28A0A0C4DH34 117 aa11.65□□□□□ -0.55
CD40-207ENST00000620709 FABP5P3A8MUU1 101 aa11.65□□□□□ -0.55
CD40-207ENST00000620709 ZNF80P51504 273 aaPredicted RBP11.65□□□□□ -0.55
CD40-207ENST00000620709 GDF5OSQ5U4N7 250 aa11.65□□□□□ -0.55
CD40-207ENST00000620709 FAM19A4Q96LR4 140 aa11.65□□□□□ -0.55
CD40-207ENST00000620709 IGLL5B9A064 214 aa11.64□□□□□ -0.55
CD40-207ENST00000620709 GIG44P09565 113 aaPredicted RBP11.64□□□□□ -0.55
CD40-207ENST00000620709 CRISP2P16562 243 aa11.64□□□□□ -0.55
CD40-207ENST00000620709 TCL1AP56279 114 aa11.64□□□□□ -0.55
CD40-207ENST00000620709 RPL19P84098 196 aaKnown RBP11.64□□□□□ -0.55
CD40-207ENST00000620709 ZFAND2AQ8N6M9 145 aa11.64□□□□□ -0.55
CD40-207ENST00000620709 Q8NAQ8 132 aa11.64□□□□□ -0.55
CD40-207ENST00000620709 GFRA4Q9GZZ7 299 aa11.64□□□□□ -0.55
CD40-207ENST00000620709 DNAH10Q8IVF4 4471 aa11.64□□□□□ -0.55
CD40-207ENST00000620709 VPS13DQ5THJ4 4388 aa11.63□□□□□ -0.55
CD40-207ENST00000620709 XKRY2A2RUG3 117 aa11.63□□□□□ -0.55
CD40-207ENST00000620709 FAM231BA6NCW3 169 aa11.63□□□□□ -0.55
CD40-207ENST00000620709 RBMY1A1P0DJD3 496 aaKnown RBP11.63□□□□□ -0.55
CD40-207ENST00000620709 RBMY1CP0DJD4 496 aa11.63□□□□□ -0.55
CD40-207ENST00000620709 RBMY1FQ15415 496 aaKnown RBP11.63□□□□□ -0.55
CD40-207ENST00000620709 LGALS9CQ6DKI2 356 aa11.63□□□□□ -0.55
CD40-207ENST00000620709 NEU1Q99519 415 aa11.63□□□□□ -0.55
CD40-207ENST00000620709 NAT8BQ9UHF3 227 aa11.63□□□□□ -0.55
CD40-207ENST00000620709 TMEM189A5PLL7 270 aa11.62□□□□□ -0.55
CD40-207ENST00000620709 TYMSP04818 313 aa11.62□□□□□ -0.55
CD40-207ENST00000620709 LEPP41159 167 aa11.62□□□□□ -0.55
CD40-207ENST00000620709 RPS10P46783 165 aaKnown RBP11.62□□□□□ -0.55
CD40-207ENST00000620709 RPS20P60866 119 aaKnown RBP11.62□□□□□ -0.55
CD40-207ENST00000620709 TMA7Q9Y2S6 64 aaKnown RBP11.62□□□□□ -0.55
CD40-207ENST00000620709 HIGD1CA8MV81 97 aa11.61□□□□□ -0.55
CD40-207ENST00000620709 GPX1P07203 203 aa11.61□□□□□ -0.55
CD40-207ENST00000620709 HLA-DRB4P13762 266 aa11.61□□□□□ -0.55
CD40-207ENST00000620709 MIFP14174 115 aa11.61□□□□□ -0.55
CD40-207ENST00000620709 LINC01559Q495D7 138 aa11.61□□□□□ -0.55
CD40-207ENST00000620709 PRR9Q5T870 116 aa11.61□□□□□ -0.55
CD40-207ENST00000620709 XCL2Q9UBD3 114 aa11.61□□□□□ -0.55
CD40-207ENST00000620709 HLA-DRB4X5D2U9 266 aa11.61□□□□□ -0.55
CD40-207ENST00000620709 TRAV21A0A0B4J279 112 aa11.6□□□□□ -0.55
CD40-207ENST00000620709 KLLNB2CW77 178 aa11.6□□□□□ -0.55
CD40-207ENST00000620709 J3KRW8 73 aa11.6□□□□□ -0.55
CD40-207ENST00000620709 IGKV3-20P01619 116 aa11.6□□□□□ -0.55
CD40-207ENST00000620709 TSPOP30536 169 aa11.6□□□□□ -0.55
CD40-207ENST00000620709 NUP35Q8NFH5 326 aa11.6□□□□□ -0.55
CD40-207ENST00000620709 X6R8D5 127 aa11.6□□□□□ -0.55
CD40-207ENST00000620709 A8MTW9 85 aa11.6□□□□□ -0.55
CD40-207ENST00000620709 ORM1P02763 201 aa11.6□□□□□ -0.55
CD40-207ENST00000620709 NUTF2P61970 127 aaKnown RBP11.6□□□□□ -0.55
CD40-207ENST00000620709 Q6AWC8 147 aa11.6□□□□□ -0.55
CD40-207ENST00000620709 GTSF1Q8WW33 167 aa11.6□□□□□ -0.55
CD40-207ENST00000620709 H3BMM0 161 aa11.59□□□□□ -0.55
CD40-207ENST00000620709 GZMBP10144 247 aa11.59□□□□□ -0.55
CD40-207ENST00000620709 RNASE4P34096 147 aaKnown RBP11.59□□□□□ -0.55
CD40-207ENST00000620709 FXYD7P58549 80 aa11.59□□□□□ -0.55
CD40-207ENST00000620709 Q6ZTC4 211 aa11.59□□□□□ -0.55
CD40-207ENST00000620709 TMSB15BA0A087X1C1 80 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms