RNA–Protein interactions for RNA: ENST00000620578.4

COPS7B-224, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2 BASIC

Gene COPS7B, Length 2,500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-224ENST00000620578 ARMS2P0C7Q2 107 aa11.22□□□□□ -0.61
COPS7B-224ENST00000620578 KIAA1644Q3SXP7 199 aa11.22□□□□□ -0.61
COPS7B-224ENST00000620578 AMTNQ6UX39 209 aa11.22□□□□□ -0.61
COPS7B-224ENST00000620578 FRZBQ92765 325 aa11.22□□□□□ -0.61
COPS7B-224ENST00000620578 RBMY1A1P0DJD3 496 aaKnown RBP11.22□□□□□ -0.61
COPS7B-224ENST00000620578 RBMY1CP0DJD4 496 aa11.22□□□□□ -0.61
COPS7B-224ENST00000620578 HTN1P15515 57 aa11.22□□□□□ -0.61
COPS7B-224ENST00000620578 RAB4BP61018 213 aa11.22□□□□□ -0.61
COPS7B-224ENST00000620578 RBMY1FQ15415 496 aaKnown RBP11.22□□□□□ -0.61
COPS7B-224ENST00000620578 GFI1BQ5VTD9 330 aa11.22□□□□□ -0.61
COPS7B-224ENST00000620578 MSRB1Q9NZV6 116 aa11.22□□□□□ -0.61
COPS7B-224ENST00000620578 TP53TG3Q9ULZ0 132 aa11.22□□□□□ -0.61
COPS7B-224ENST00000620578 LYZL1Q6UWQ5 148 aa11.21□□□□□ -0.61
COPS7B-224ENST00000620578 FOXI2Q6ZQN5 318 aa11.21□□□□□ -0.61
COPS7B-224ENST00000620578 BTF3L4Q96K17 158 aa11.21□□□□□ -0.61
COPS7B-224ENST00000620578 DEFA6Q01524 100 aa11.2□□□□□ -0.62
COPS7B-224ENST00000620578 NAT8BQ9UHF3 227 aa11.2□□□□□ -0.62
COPS7B-224ENST00000620578 A6NJY4 79 aa11.2□□□□□ -0.62
COPS7B-224ENST00000620578 ANXA2RQ3ZCQ2 193 aa11.2□□□□□ -0.62
COPS7B-224ENST00000620578 PHOX2AO14813 284 aa11.19□□□□□ -0.62
COPS7B-224ENST00000620578 CFAP161Q6P656 301 aa11.19□□□□□ -0.62
COPS7B-224ENST00000620578 FBLL1A6NHQ2 334 aaKnown RBP11.19□□□□□ -0.62
COPS7B-224ENST00000620578 SNURFLB1AK76 121 aa11.19□□□□□ -0.62
COPS7B-224ENST00000620578 KLLNB2CW77 178 aa11.19□□□□□ -0.62
COPS7B-224ENST00000620578 HLA-DRB4P13762 266 aa11.19□□□□□ -0.62
COPS7B-224ENST00000620578 SRD5A3Q9H8P0 318 aa11.19□□□□□ -0.62
COPS7B-224ENST00000620578 HLA-DRB4X5D2U9 266 aa11.19□□□□□ -0.62
COPS7B-224ENST00000620578 MUC4Q99102 2169 aa11.19□□□□□ -0.62
COPS7B-224ENST00000620578 OR11H12B2RN74 326 aa11.18□□□□□ -0.62
COPS7B-224ENST00000620578 CRXO43186 299 aaPredicted RBP11.18□□□□□ -0.62
COPS7B-224ENST00000620578 CRISP2P16562 243 aa11.18□□□□□ -0.62
COPS7B-224ENST00000620578 OXLD1Q5BKU9 147 aa11.18□□□□□ -0.62
COPS7B-224ENST00000620578 DEFB125Q8N687 156 aa11.18□□□□□ -0.62
COPS7B-224ENST00000620578 C19orf73Q9NVV2 129 aa11.18□□□□□ -0.62
COPS7B-224ENST00000620578 SAMD13Q5VXD3 122 aa11.18□□□□□ -0.62
COPS7B-224ENST00000620578 XCL2Q9UBD3 114 aa11.18□□□□□ -0.62
COPS7B-224ENST00000620578 TRAPPC1Q9Y5R8 145 aa11.18□□□□□ -0.62
COPS7B-224ENST00000620578 TRAV25A0A0B4J276 109 aa11.17□□□□□ -0.62
COPS7B-224ENST00000620578 ZNF324O75467 553 aaPredicted RBP11.17□□□□□ -0.62
COPS7B-224ENST00000620578 TRGC1P0CF51 173 aa11.17□□□□□ -0.62
COPS7B-224ENST00000620578 RPL35AP18077 110 aaKnown RBP11.17□□□□□ -0.62
COPS7B-224ENST00000620578 CDKN1BP46527 198 aa11.17□□□□□ -0.62
COPS7B-224ENST00000620578 C1orf196B1AJZ1 125 aa11.17□□□□□ -0.62
COPS7B-224ENST00000620578 TYMSP04818 313 aa11.17□□□□□ -0.62
COPS7B-224ENST00000620578 SLAQ13239 276 aa11.17□□□□□ -0.62
COPS7B-224ENST00000620578 CT83Q5H943 113 aa11.17□□□□□ -0.62
COPS7B-224ENST00000620578 C12orf54Q6X4T0 127 aa11.17□□□□□ -0.62
COPS7B-224ENST00000620578 TMEM136Q6ZRR5 245 aa11.17□□□□□ -0.62
COPS7B-224ENST00000620578 MDFIQ99750 246 aa11.17□□□□□ -0.62
COPS7B-224ENST00000620578 H3BVH4 76 aa11.16□□□□□ -0.62
COPS7B-224ENST00000620578 TCAPO15273 167 aa11.16□□□□□ -0.62
COPS7B-224ENST00000620578 HIST1H2BKO60814 126 aa11.16□□□□□ -0.62
COPS7B-224ENST00000620578 HIST1H2BJP06899 126 aa11.16□□□□□ -0.62
COPS7B-224ENST00000620578 HIST1H2BOP23527 126 aa11.16□□□□□ -0.62
COPS7B-224ENST00000620578 HIST1H2BBP33778 126 aa11.16□□□□□ -0.62
COPS7B-224ENST00000620578 HIST1H2BDP58876 126 aa11.16□□□□□ -0.62
COPS7B-224ENST00000620578 HIST1H2BCP62807 126 aa11.16□□□□□ -0.62
COPS7B-224ENST00000620578 HIST2H2BEQ16778 126 aa11.16□□□□□ -0.62
COPS7B-224ENST00000620578 BEAN1Q3B7T3 259 aa11.16□□□□□ -0.62
COPS7B-224ENST00000620578 LINC01559Q495D7 138 aa11.16□□□□□ -0.62
COPS7B-224ENST00000620578 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.16□□□□□ -0.62
COPS7B-224ENST00000620578 OR10AG1Q8NH19 301 aa11.16□□□□□ -0.62
COPS7B-224ENST00000620578 HIST1H2BHQ93079 126 aa11.16□□□□□ -0.62
COPS7B-224ENST00000620578 C14orf144Q96I85 54 aa11.16□□□□□ -0.62
COPS7B-224ENST00000620578 HIST1H2BNQ99877 126 aa11.16□□□□□ -0.62
COPS7B-224ENST00000620578 HIST1H2BMQ99879 126 aa11.16□□□□□ -0.62
COPS7B-224ENST00000620578 ZNF747Q9BV97 191 aa11.16□□□□□ -0.62
COPS7B-224ENST00000620578 LENEPQ9Y5L5 61 aa11.16□□□□□ -0.62
COPS7B-224ENST00000620578 TRAV21A0A0B4J279 112 aa11.16□□□□□ -0.62
COPS7B-224ENST00000620578 S100A8P05109 93 aa11.16□□□□□ -0.62
COPS7B-224ENST00000620578 MRPL18Q9H0U6 180 aaKnown RBP11.16□□□□□ -0.62
COPS7B-224ENST00000620578 TRAV2A0A0B4J234 112 aa11.15□□□□□ -0.62
COPS7B-224ENST00000620578 FER1L6-AS1Q8NA97 138 aa11.15□□□□□ -0.62
COPS7B-224ENST00000620578 CHTOPQ9Y3Y2 248 aaKnown RBP11.15□□□□□ -0.62
COPS7B-224ENST00000620578 IGHV3OR16-12A0A075B7B8 117 aa11.15□□□□□ -0.62
COPS7B-224ENST00000620578 C7orf71A4D174 169 aa11.15□□□□□ -0.62
COPS7B-224ENST00000620578 NTF3P20783 257 aa11.15□□□□□ -0.62
COPS7B-224ENST00000620578 Q6AWC8 147 aa11.15□□□□□ -0.62
COPS7B-224ENST00000620578 STHQ8IWL8 128 aa11.15□□□□□ -0.62
COPS7B-224ENST00000620578 A0A1B0GXF2 115 aa11.14□□□□□ -0.63
COPS7B-224ENST00000620578 IGLC6P0CF74 106 aa11.14□□□□□ -0.63
COPS7B-224ENST00000620578 MDFICQ9P1T7 246 aa11.14□□□□□ -0.63
COPS7B-224ENST00000620578 DUSP14O95147 198 aaKnown RBP11.14□□□□□ -0.63
COPS7B-224ENST00000620578 GFRA4Q9GZZ7 299 aa11.14□□□□□ -0.63
COPS7B-224ENST00000620578 A0A1B0GUT8 65 aa11.13□□□□□ -0.63
COPS7B-224ENST00000620578 SNRPEP62304 92 aaKnown RBP11.13□□□□□ -0.63
COPS7B-224ENST00000620578 TWIST1Q15672 202 aa11.13□□□□□ -0.63
COPS7B-224ENST00000620578 F2Z2F3 143 aa11.12□□□□□ -0.63
COPS7B-224ENST00000620578 LEPP41159 167 aa11.12□□□□□ -0.63
COPS7B-224ENST00000620578 NDUFA6P56556 154 aa11.12□□□□□ -0.63
COPS7B-224ENST00000620578 RAB5BP61020 215 aa11.12□□□□□ -0.63
COPS7B-224ENST00000620578 Q8N1Y9 231 aa11.12□□□□□ -0.63
COPS7B-224ENST00000620578 WFDC9Q8NEX5 89 aa11.12□□□□□ -0.63
COPS7B-224ENST00000620578 GIG44P09565 113 aaPredicted RBP11.12□□□□□ -0.63
COPS7B-224ENST00000620578 RNASE3P12724 160 aaKnown RBP11.12□□□□□ -0.63
COPS7B-224ENST00000620578 HBBP68871 147 aa11.12□□□□□ -0.63
COPS7B-224ENST00000620578 PDZD11Q5EBL8 140 aa11.12□□□□□ -0.63
COPS7B-224ENST00000620578 C9orf66Q5T8R8 295 aa11.12□□□□□ -0.63
COPS7B-224ENST00000620578 FAM159AQ6UWV7 190 aa11.12□□□□□ -0.63
COPS7B-224ENST00000620578 TMEM158Q8WZ71 300 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms