RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 MAGOHBQ96A72 148 aaKnown RBP0.7□□□□□ -2.3
TARDBP-220ENST00000618606 PHRF1Q9P1Y6 1649 aaKnown RBP0.7□□□□□ -2.3
TARDBP-220ENST00000618606 DISP2A7MBM2 1401 aa0.7□□□□□ -2.3
TARDBP-220ENST00000618606 MCM3APO60318 1980 aa0.7□□□□□ -2.3
TARDBP-220ENST00000618606 ERCC6Q03468 1493 aa0.69□□□□□ -2.3
TARDBP-220ENST00000618606 TRBV20-1A0A075B6N2 111 aa0.69□□□□□ -2.3
TARDBP-220ENST00000618606 IGLV3-32A0A0A0MS00 114 aa0.69□□□□□ -2.3
TARDBP-220ENST00000618606 PNMA8CA0A1B0GUJ8 204 aa0.69□□□□□ -2.3
TARDBP-220ENST00000618606 TMEM30CPA0ZSE6 113 aa0.69□□□□□ -2.3
TARDBP-220ENST00000618606 ZNF670-ZNF695F2Z2N8 137 aa0.69□□□□□ -2.3
TARDBP-220ENST00000618606 GNG7O60262 68 aa0.69□□□□□ -2.3
TARDBP-220ENST00000618606 PITX3O75364 302 aa0.69□□□□□ -2.3
TARDBP-220ENST00000618606 ANGP03950 147 aaKnown RBP0.69□□□□□ -2.3
TARDBP-220ENST00000618606 ADCYAP1P18509 176 aa0.69□□□□□ -2.3
TARDBP-220ENST00000618606 PDE6GP18545 87 aa0.69□□□□□ -2.3
TARDBP-220ENST00000618606 EFNA4P52798 201 aa0.69□□□□□ -2.3
TARDBP-220ENST00000618606 RPL37AP61513 92 aaKnown RBP0.69□□□□□ -2.3
TARDBP-220ENST00000618606 COPZ1P61923 177 aa0.69□□□□□ -2.3
TARDBP-220ENST00000618606 RHOHQ15669 191 aa0.69□□□□□ -2.3
TARDBP-220ENST00000618606 CCSMST1Q4G0I0 132 aa0.69□□□□□ -2.3
TARDBP-220ENST00000618606 LINC00299Q6ZSB3 139 aa0.69□□□□□ -2.3
TARDBP-220ENST00000618606 SLC25A26Q70HW3 274 aa0.69□□□□□ -2.3
TARDBP-220ENST00000618606 PLPP5Q8NEB5 264 aa0.69□□□□□ -2.3
TARDBP-220ENST00000618606 SDF2Q99470 211 aa0.69□□□□□ -2.3
TARDBP-220ENST00000618606 HEATR1Q9H583 2144 aaKnown RBP0.69□□□□□ -2.3
TARDBP-220ENST00000618606 MRPL36Q9P0J6 103 aaKnown RBP0.69□□□□□ -2.3
TARDBP-220ENST00000618606 NOP16Q9Y3C1 178 aaKnown RBP0.69□□□□□ -2.3
TARDBP-220ENST00000618606 PTPRFP10586 1907 aa0.69□□□□□ -2.3
TARDBP-220ENST00000618606 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.69□□□□□ -2.3
TARDBP-220ENST00000618606 FLG2Q5D862 2391 aaPredicted RBP0.69□□□□□ -2.3
TARDBP-220ENST00000618606 IBTKQ9P2D0 1353 aaPredicted RBP0.69□□□□□ -2.3
TARDBP-220ENST00000618606 INTS1Q8N201 2190 aaKnown RBP0.69□□□□□ -2.3
TARDBP-220ENST00000618606 E9PCH4 1651 aa0.69□□□□□ -2.3
TARDBP-220ENST00000618606 SIP14410 1827 aa0.68□□□□□ -2.3
TARDBP-220ENST00000618606 CASP8AP2Q9UKL3 1982 aa0.68□□□□□ -2.3
TARDBP-220ENST00000618606 FREM3P0C091 2139 aa0.68□□□□□ -2.3
TARDBP-220ENST00000618606 WDR97A6NE52 1622 aa0.68□□□□□ -2.3
TARDBP-220ENST00000618606 LRP5O75197 1615 aa0.68□□□□□ -2.3
TARDBP-220ENST00000618606 ALPK3Q96L96 1907 aa0.68□□□□□ -2.3
TARDBP-220ENST00000618606 NUPR2A6NF83 97 aa0.68□□□□□ -2.3
TARDBP-220ENST00000618606 K7EP13 123 aa0.68□□□□□ -2.3
TARDBP-220ENST00000618606 M0R2P5 195 aa0.68□□□□□ -2.3
TARDBP-220ENST00000618606 NCR3O14931 201 aa0.68□□□□□ -2.3
TARDBP-220ENST00000618606 TPST1O60507 370 aa0.68□□□□□ -2.3
TARDBP-220ENST00000618606 IGF2P01344 180 aa0.68□□□□□ -2.3
TARDBP-220ENST00000618606 IGHV3-30P01768 117 aa0.68□□□□□ -2.3
TARDBP-220ENST00000618606 IGHV3-30-5P0DP03 117 aa0.68□□□□□ -2.3
TARDBP-220ENST00000618606 ATP11AUNQ6ZP68 121 aa0.68□□□□□ -2.3
TARDBP-220ENST00000618606 ATP6V0E2Q8NHE4 81 aa0.68□□□□□ -2.3
TARDBP-220ENST00000618606 MRPL57Q9BQC6 102 aaKnown RBP0.68□□□□□ -2.3
TARDBP-220ENST00000618606 BOKQ9UMX3 212 aaPredicted RBP0.68□□□□□ -2.3
TARDBP-220ENST00000618606 CACNA1BQ00975 2339 aa0.67□□□□□ -2.3
TARDBP-220ENST00000618606 PTPRGP23470 1445 aa0.67□□□□□ -2.3
TARDBP-220ENST00000618606 UNC13CQ8NB66 2214 aa0.67□□□□□ -2.3
TARDBP-220ENST00000618606 A0A0G2JMM0 328 aa0.67□□□□□ -2.3
TARDBP-220ENST00000618606 LOC101927531A0A1B0GV80 90 aa0.67□□□□□ -2.3
TARDBP-220ENST00000618606 A0A1B0GV90 55 aa0.67□□□□□ -2.3
TARDBP-220ENST00000618606 NCR2O95944 276 aa0.67□□□□□ -2.3
TARDBP-220ENST00000618606 SLC25A6P12236 298 aa0.67□□□□□ -2.3
TARDBP-220ENST00000618606 POLR2JP52435 117 aaKnown RBP0.67□□□□□ -2.3
TARDBP-220ENST00000618606 RRAS2P62070 204 aaPredicted RBP0.67□□□□□ -2.3
TARDBP-220ENST00000618606 AMELYQ99218 206 aa0.67□□□□□ -2.3
TARDBP-220ENST00000618606 CTTNBP2Q8WZ74 1663 aa0.67□□□□□ -2.3
TARDBP-220ENST00000618606 KIDINS220Q9ULH0 1771 aa0.67□□□□□ -2.3
TARDBP-220ENST00000618606 TNRC6AQ8NDV7 1962 aaKnown RBP0.66□□□□□ -2.3
TARDBP-220ENST00000618606 MED13Q9UHV7 2174 aa0.66□□□□□ -2.3
TARDBP-220ENST00000618606 CXorf51AA0A1B0GTR3 108 aa0.66□□□□□ -2.3
TARDBP-220ENST00000618606 J3QLW9 94 aa0.66□□□□□ -2.3
TARDBP-220ENST00000618606 GYPBP06028 91 aa0.66□□□□□ -2.3
TARDBP-220ENST00000618606 PYYP10082 97 aa0.66□□□□□ -2.3
TARDBP-220ENST00000618606 UNQ5815/PRO19632Q6UWF5 114 aa0.66□□□□□ -2.3
TARDBP-220ENST00000618606 Q6ZUT4 128 aa0.66□□□□□ -2.3
TARDBP-220ENST00000618606 Q86TA4 180 aa0.66□□□□□ -2.3
TARDBP-220ENST00000618606 DYNLRB2Q8TF09 96 aa0.66□□□□□ -2.3
TARDBP-220ENST00000618606 DPH3Q96FX2 82 aa0.66□□□□□ -2.3
TARDBP-220ENST00000618606 LINC00208Q96KT6 92 aa0.66□□□□□ -2.3
TARDBP-220ENST00000618606 LINC00470Q9BZP3 86 aa0.66□□□□□ -2.3
TARDBP-220ENST00000618606 ATG5Q9H1Y0 275 aa0.66□□□□□ -2.3
TARDBP-220ENST00000618606 TAS2R8Q9NYW2 309 aa0.66□□□□□ -2.3
TARDBP-220ENST00000618606 PAIP2BQ9ULR5 123 aaKnown RBP0.66□□□□□ -2.3
TARDBP-220ENST00000618606 CDK5RAP2Q96SN8 1893 aa0.66□□□□□ -2.3
TARDBP-220ENST00000618606 KIAA1549LQ6ZVL6 1849 aa0.66□□□□□ -2.3
TARDBP-220ENST00000618606 MYH1P12882 1939 aa0.66□□□□□ -2.3
TARDBP-220ENST00000618606 RP1L1Q8IWN7 2480 aaPredicted RBP0.65□□□□□ -2.3
TARDBP-220ENST00000618606 TET1Q8NFU7 2136 aa0.65□□□□□ -2.3
TARDBP-220ENST00000618606 TRPM7Q96QT4 1865 aa0.65□□□□□ -2.3
TARDBP-220ENST00000618606 NBDYA0A0U1RRE5 68 aa0.65□□□□□ -2.31
TARDBP-220ENST00000618606 YPEL1O60688 119 aa0.65□□□□□ -2.31
TARDBP-220ENST00000618606 CCKP06307 115 aa0.65□□□□□ -2.31
TARDBP-220ENST00000618606 SELENOWP63302 87 aa0.65□□□□□ -2.31
TARDBP-220ENST00000618606 LINC01545Q5VT33 79 aa0.65□□□□□ -2.31
TARDBP-220ENST00000618606 RPL13AP3Q6NVV1 102 aa0.65□□□□□ -2.31
TARDBP-220ENST00000618606 ARL11Q969Q4 196 aa0.65□□□□□ -2.31
TARDBP-220ENST00000618606 DMAC1Q96GE9 116 aa0.65□□□□□ -2.31
TARDBP-220ENST00000618606 CCL19Q99731 98 aa0.65□□□□□ -2.31
TARDBP-220ENST00000618606 SAR1AQ9NR31 198 aa0.65□□□□□ -2.31
TARDBP-220ENST00000618606 NDUFA12Q9UI09 145 aa0.65□□□□□ -2.31
TARDBP-220ENST00000618606 PTPRDP23468 1912 aa0.65□□□□□ -2.31
TARDBP-220ENST00000618606 HELZP42694 1942 aaKnown RBP0.65□□□□□ -2.31
TARDBP-220ENST00000618606 UHRF1BP1LA0JNW5 1464 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms