RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 IGLV1-51P01701 117 aa12.5□□□□□ -0.41
TRAPPC3-210ENST00000617904 APCSP02743 223 aa12.5□□□□□ -0.41
TRAPPC3-210ENST00000617904 S100A4P26447 101 aaKnown RBP12.5□□□□□ -0.41
TRAPPC3-210ENST00000617904 ZNF80P51504 273 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC3-210ENST00000617904 HIST2H2BDQ6DRA6 164 aa12.5□□□□□ -0.41
TRAPPC3-210ENST00000617904 ZFAND2AQ8N6M9 145 aa12.5□□□□□ -0.41
TRAPPC3-210ENST00000617904 LINC00482Q8N8I6 264 aa12.5□□□□□ -0.41
TRAPPC3-210ENST00000617904 FAM110AQ9BQ89 295 aa12.5□□□□□ -0.41
TRAPPC3-210ENST00000617904 J3KRW8 73 aa12.49□□□□□ -0.41
TRAPPC3-210ENST00000617904 TRGC1P0CF51 173 aa12.49□□□□□ -0.41
TRAPPC3-210ENST00000617904 CD33P20138 364 aa12.49□□□□□ -0.41
TRAPPC3-210ENST00000617904 ASIPP42127 132 aa12.49□□□□□ -0.41
TRAPPC3-210ENST00000617904 CAMPP49913 170 aa12.49□□□□□ -0.41
TRAPPC3-210ENST00000617904 STHQ8IWL8 128 aa12.49□□□□□ -0.41
TRAPPC3-210ENST00000617904 GTSF1Q8WW33 167 aa12.49□□□□□ -0.41
TRAPPC3-210ENST00000617904 CLUHP3Q96NS8 147 aa12.49□□□□□ -0.41
TRAPPC3-210ENST00000617904 NAGKQ9UJ70 344 aa12.49□□□□□ -0.41
TRAPPC3-210ENST00000617904 KLLNB2CW77 178 aa12.48□□□□□ -0.41
TRAPPC3-210ENST00000617904 G3V4G9 280 aa12.48□□□□□ -0.41
TRAPPC3-210ENST00000617904 CACNG7P62955 275 aa12.48□□□□□ -0.41
TRAPPC3-210ENST00000617904 BEAN1Q3B7T3 259 aa12.48□□□□□ -0.41
TRAPPC3-210ENST00000617904 IGKV3-20P01619 116 aa12.47□□□□□ -0.41
TRAPPC3-210ENST00000617904 MED14OSP0DP75 135 aa12.47□□□□□ -0.41
TRAPPC3-210ENST00000617904 GZMBP10144 247 aa12.47□□□□□ -0.41
TRAPPC3-210ENST00000617904 CTRLP40313 264 aa12.47□□□□□ -0.41
TRAPPC3-210ENST00000617904 LYZL1Q6UWQ5 148 aa12.47□□□□□ -0.41
TRAPPC3-210ENST00000617904 TMEM136Q6ZRR5 245 aa12.47□□□□□ -0.41
TRAPPC3-210ENST00000617904 A0A1B0GXF2 115 aa12.46□□□□□ -0.41
TRAPPC3-210ENST00000617904 H3BMM0 161 aa12.46□□□□□ -0.41
TRAPPC3-210ENST00000617904 NDUFA6P56556 154 aa12.46□□□□□ -0.41
TRAPPC3-210ENST00000617904 KPRPQ5T749 579 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC3-210ENST00000617904 SAMD5Q5TGI4 173 aa12.46□□□□□ -0.41
TRAPPC3-210ENST00000617904 C20orf144Q9BQM9 153 aa12.46□□□□□ -0.41
TRAPPC3-210ENST00000617904 ZNF256Q9Y2P7 627 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC3-210ENST00000617904 GRIFINA4D1Z8 144 aa12.45□□□□□ -0.42
TRAPPC3-210ENST00000617904 HIST1H2BKO60814 126 aa12.45□□□□□ -0.42
TRAPPC3-210ENST00000617904 HIST1H2BJP06899 126 aa12.45□□□□□ -0.42
TRAPPC3-210ENST00000617904 IGLC6P0CF74 106 aa12.45□□□□□ -0.42
TRAPPC3-210ENST00000617904 HIST1H2BOP23527 126 aa12.45□□□□□ -0.42
TRAPPC3-210ENST00000617904 HIST1H2BBP33778 126 aa12.45□□□□□ -0.42
TRAPPC3-210ENST00000617904 HIST1H2BDP58876 126 aa12.45□□□□□ -0.42
TRAPPC3-210ENST00000617904 HIST1H2BCP62807 126 aa12.45□□□□□ -0.42
TRAPPC3-210ENST00000617904 TWIST1Q15672 202 aa12.45□□□□□ -0.42
TRAPPC3-210ENST00000617904 HIST2H2BEQ16778 126 aa12.45□□□□□ -0.42
TRAPPC3-210ENST00000617904 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC3-210ENST00000617904 GDF5OSQ5U4N7 250 aa12.45□□□□□ -0.42
TRAPPC3-210ENST00000617904 GTSCR1Q86UQ5 136 aa12.45□□□□□ -0.42
TRAPPC3-210ENST00000617904 HIST1H2BHQ93079 126 aa12.45□□□□□ -0.42
TRAPPC3-210ENST00000617904 HIST1H2BNQ99877 126 aa12.45□□□□□ -0.42
TRAPPC3-210ENST00000617904 HIST1H2BMQ99879 126 aa12.45□□□□□ -0.42
TRAPPC3-210ENST00000617904 KNCNA6PVL3 124 aa12.44□□□□□ -0.42
TRAPPC3-210ENST00000617904 A8MTW9 85 aa12.44□□□□□ -0.42
TRAPPC3-210ENST00000617904 OR5AL1P0C617 328 aa12.44□□□□□ -0.42
TRAPPC3-210ENST00000617904 DEFB1P60022 68 aa12.44□□□□□ -0.42
TRAPPC3-210ENST00000617904 SPANXN1Q5VSR9 72 aa12.44□□□□□ -0.42
TRAPPC3-210ENST00000617904 TRGV11A0A075B6L2 103 aa12.43□□□□□ -0.42
TRAPPC3-210ENST00000617904 TRAV12-3A0A0B4J271 114 aa12.43□□□□□ -0.42
TRAPPC3-210ENST00000617904 PRB2P02812 416 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC3-210ENST00000617904 ARMS2P0C7Q2 107 aa12.43□□□□□ -0.42
TRAPPC3-210ENST00000617904 S100A2P29034 98 aa12.43□□□□□ -0.42
TRAPPC3-210ENST00000617904 SPINK13Q1W4C9 94 aa12.43□□□□□ -0.42
TRAPPC3-210ENST00000617904 ZMAT5Q9UDW3 170 aaKnown RBP12.43□□□□□ -0.42
TRAPPC3-210ENST00000617904 IGKV3D-20A0A0C4DH25 116 aa12.42□□□□□ -0.42
TRAPPC3-210ENST00000617904 INSP01308 110 aa12.42□□□□□ -0.42
TRAPPC3-210ENST00000617904 ANXA2RQ3ZCQ2 193 aa12.42□□□□□ -0.42
TRAPPC3-210ENST00000617904 DNLZQ5SXM8 178 aa12.42□□□□□ -0.42
TRAPPC3-210ENST00000617904 GATD1Q8NB37 220 aa12.42□□□□□ -0.42
TRAPPC3-210ENST00000617904 C1QTNF4Q9BXJ3 329 aa12.42□□□□□ -0.42
TRAPPC3-210ENST00000617904 PHLDA3Q9Y5J5 127 aa12.42□□□□□ -0.42
TRAPPC3-210ENST00000617904 SNRPEP62304 92 aaKnown RBP12.41□□□□□ -0.42
TRAPPC3-210ENST00000617904 OR10J3Q5JRS4 329 aa12.41□□□□□ -0.42
TRAPPC3-210ENST00000617904 PRR9Q5T870 116 aa12.41□□□□□ -0.42
TRAPPC3-210ENST00000617904 GFI1BQ5VTD9 330 aa12.41□□□□□ -0.42
TRAPPC3-210ENST00000617904 MORN3Q6PF18 240 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC3-210ENST00000617904 SYT8Q8NBV8 401 aa12.41□□□□□ -0.42
TRAPPC3-210ENST00000617904 CNFNQ9BYD5 112 aa12.41□□□□□ -0.42
TRAPPC3-210ENST00000617904 IGHV1OR15-1A0A075B7D0 117 aa12.4□□□□□ -0.42
TRAPPC3-210ENST00000617904 M0R2Z0 102 aa12.4□□□□□ -0.42
TRAPPC3-210ENST00000617904 SNAI2O43623 268 aa12.4□□□□□ -0.42
TRAPPC3-210ENST00000617904 CD7P09564 240 aa12.4□□□□□ -0.42
TRAPPC3-210ENST00000617904 NTF3P20783 257 aa12.4□□□□□ -0.42
TRAPPC3-210ENST00000617904 ODF3L2Q3SX64 289 aa12.4□□□□□ -0.42
TRAPPC3-210ENST00000617904 TDRG1Q3Y452 100 aa12.4□□□□□ -0.42
TRAPPC3-210ENST00000617904 MUC21Q5SSG8 566 aa12.4□□□□□ -0.42
TRAPPC3-210ENST00000617904 AMTNQ6UX39 209 aa12.4□□□□□ -0.42
TRAPPC3-210ENST00000617904 ZNF493Q6ZR52 646 aa12.4□□□□□ -0.42
TRAPPC3-210ENST00000617904 BAGE3Q86Y29 109 aa12.4□□□□□ -0.42
TRAPPC3-210ENST00000617904 SSBP4Q9BWG4 385 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC3-210ENST00000617904 C5orf52A6NGY3 159 aa12.39□□□□□ -0.43
TRAPPC3-210ENST00000617904 TMEM256Q8N2U0 113 aa12.39□□□□□ -0.43
TRAPPC3-210ENST00000617904 C11orf21Q9P2W6 132 aa12.39□□□□□ -0.43
TRAPPC3-210ENST00000617904 H3BVH4 76 aa12.38□□□□□ -0.43
TRAPPC3-210ENST00000617904 PHOX2AO14813 284 aa12.38□□□□□ -0.43
TRAPPC3-210ENST00000617904 ZNF324O75467 553 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC3-210ENST00000617904 Q0VG73 95 aa12.38□□□□□ -0.43
TRAPPC3-210ENST00000617904 OXLD1Q5BKU9 147 aa12.38□□□□□ -0.43
TRAPPC3-210ENST00000617904 TMEM208Q9BTX3 173 aa12.38□□□□□ -0.43
TRAPPC3-210ENST00000617904 TMEM191AQ9H0A3 160 aa12.38□□□□□ -0.43
TRAPPC3-210ENST00000617904 DNAH3Q8TD57 4116 aa12.38□□□□□ -0.43
TRAPPC3-210ENST00000617904 IGHV4-4A0A075B6R2 117 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms