RNA–Protein interactions for RNA: ENST00000617875.4

RECQL4-209, Transcript of RecQ like helicase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RECQL4, Length 3,809 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-209ENST00000617875 A0A1W2PPM0 123 aa12.48□□□□□ -0.41
RECQL4-209ENST00000617875 GAS8-AS1O95177 125 aa12.48□□□□□ -0.41
RECQL4-209ENST00000617875 KAAG1Q9UBP8 84 aa12.48□□□□□ -0.41
RECQL4-209ENST00000617875 TRAV41A0A0B4J266 112 aa12.48□□□□□ -0.41
RECQL4-209ENST00000617875 C19orf71A6NCJ1 209 aa12.48□□□□□ -0.41
RECQL4-209ENST00000617875 H3BRM9 83 aa12.48□□□□□ -0.41
RECQL4-209ENST00000617875 CFHR4Q92496 578 aa12.47□□□□□ -0.41
RECQL4-209ENST00000617875 MLST8Q9BVC4 326 aa12.47□□□□□ -0.41
RECQL4-209ENST00000617875 NPIPB6E9PJ23 425 aa12.47□□□□□ -0.41
RECQL4-209ENST00000617875 K7EP34 96 aa12.47□□□□□ -0.41
RECQL4-209ENST00000617875 ASIPP42127 132 aa12.47□□□□□ -0.41
RECQL4-209ENST00000617875 GAGE13Q4V321 117 aa12.47□□□□□ -0.41
RECQL4-209ENST00000617875 Q6ZQT7 251 aa12.47□□□□□ -0.41
RECQL4-209ENST00000617875 DTX2Q86UW9 622 aa12.47□□□□□ -0.41
RECQL4-209ENST00000617875 OR5A1Q8NGJ0 315 aa12.47□□□□□ -0.41
RECQL4-209ENST00000617875 AGPAT4-IT1Q9H0P7 198 aa12.47□□□□□ -0.41
RECQL4-209ENST00000617875 TRAV12-2A0A075B6T6 113 aa12.46□□□□□ -0.41
RECQL4-209ENST00000617875 CTSGP08311 255 aa12.46□□□□□ -0.41
RECQL4-209ENST00000617875 CRIP1P50238 77 aa12.46□□□□□ -0.41
RECQL4-209ENST00000617875 DOPEY1Q5JWR5 2465 aa12.46□□□□□ -0.41
RECQL4-209ENST00000617875 AGRNO00468 2067 aa12.46□□□□□ -0.41
RECQL4-209ENST00000617875 IGKV3OR2-268A0A0C4DH90 116 aa12.46□□□□□ -0.41
RECQL4-209ENST00000617875 PSMB11A5LHX3 300 aa12.46□□□□□ -0.41
RECQL4-209ENST00000617875 KLF12Q9Y4X4 402 aa12.46□□□□□ -0.41
RECQL4-209ENST00000617875 TMEM238C9JI98 176 aa12.46□□□□□ -0.42
RECQL4-209ENST00000617875 NPC2P61916 151 aa12.46□□□□□ -0.42
RECQL4-209ENST00000617875 WFDC2Q14508 124 aa12.46□□□□□ -0.42
RECQL4-209ENST00000617875 HIST2H2BDQ6DRA6 164 aa12.46□□□□□ -0.42
RECQL4-209ENST00000617875 DPF1Q92782 380 aa12.46□□□□□ -0.42
RECQL4-209ENST00000617875 FANCD2OSQ96PS1 177 aa12.46□□□□□ -0.42
RECQL4-209ENST00000617875 CSTL1Q9H114 145 aa12.46□□□□□ -0.42
RECQL4-209ENST00000617875 PGPEP1Q9NXJ5 209 aa12.46□□□□□ -0.42
RECQL4-209ENST00000617875 PSMG4Q5JS54 123 aa12.45□□□□□ -0.42
RECQL4-209ENST00000617875 CCL19Q99731 98 aa12.45□□□□□ -0.42
RECQL4-209ENST00000617875 PRSS22Q9GZN4 317 aa12.45□□□□□ -0.42
RECQL4-209ENST00000617875 IGHV7-81A0A0B4J1V7 117 aa12.45□□□□□ -0.42
RECQL4-209ENST00000617875 NPFFO15130 113 aa12.45□□□□□ -0.42
RECQL4-209ENST00000617875 CHTOPQ9Y3Y2 248 aaKnown RBP12.45□□□□□ -0.42
RECQL4-209ENST00000617875 A0A1W2PRX2 142 aa12.44□□□□□ -0.42
RECQL4-209ENST00000617875 HERVK_113P61574 105 aa12.44□□□□□ -0.42
RECQL4-209ENST00000617875 LAGE3Q14657 143 aa12.44□□□□□ -0.42
RECQL4-209ENST00000617875 DGAT2L7PQ6IED9 249 aa12.44□□□□□ -0.42
RECQL4-209ENST00000617875 C8orf86Q6ZUL3 223 aa12.44□□□□□ -0.42
RECQL4-209ENST00000617875 LGALS9BQ3B8N2 356 aa12.44□□□□□ -0.42
RECQL4-209ENST00000617875 LGALS9CQ6DKI2 356 aa12.44□□□□□ -0.42
RECQL4-209ENST00000617875 KNCNA6PVL3 124 aa12.44□□□□□ -0.42
RECQL4-209ENST00000617875 GNRH2O43555 120 aa12.44□□□□□ -0.42
RECQL4-209ENST00000617875 IGF1P05019 195 aa12.44□□□□□ -0.42
RECQL4-209ENST00000617875 AZU1P20160 251 aa12.44□□□□□ -0.42
RECQL4-209ENST00000617875 C1orf122Q6ZSJ8 110 aa12.44□□□□□ -0.42
RECQL4-209ENST00000617875 SRSF1Q07955 248 aaKnown RBP eCLIP12.43□□□□□ -0.422e-8■■■■■ 29.9
RECQL4-209ENST00000617875 FASNP49327 2511 aaKnown RBP12.43□□□□□ -0.42
RECQL4-209ENST00000617875 TRBV25-1A0A075B6N4 114 aa12.43□□□□□ -0.42
RECQL4-209ENST00000617875 PPBPP02775 128 aa12.43□□□□□ -0.42
RECQL4-209ENST00000617875 BLCAPP62952 87 aa12.43□□□□□ -0.42
RECQL4-209ENST00000617875 IGKV2D-26A0A0A0MRZ7 120 aa12.42□□□□□ -0.42
RECQL4-209ENST00000617875 HOXA3O43365 443 aaPredicted RBP12.42□□□□□ -0.42
RECQL4-209ENST00000617875 CRYGCP07315 174 aa12.42□□□□□ -0.42
RECQL4-209ENST00000617875 RAX2Q96IS3 184 aa12.42□□□□□ -0.42
RECQL4-209ENST00000617875 TRBV12-3P01733 135 aa12.42□□□□□ -0.42
RECQL4-209ENST00000617875 RHPN1-AS1Q9BWJ2 59 aa12.42□□□□□ -0.42
RECQL4-209ENST00000617875 NPFFR1Q9GZQ6 430 aa12.42□□□□□ -0.42
RECQL4-209ENST00000617875 RAI1Q7Z5J4 1906 aaPredicted RBP12.41□□□□□ -0.42
RECQL4-209ENST00000617875 TMEM238LA0A1B0GVL6 79 aa12.41□□□□□ -0.42
RECQL4-209ENST00000617875 A6NJY4 79 aa12.41□□□□□ -0.42
RECQL4-209ENST00000617875 LYPD1Q8N2G4 141 aa12.41□□□□□ -0.42
RECQL4-209ENST00000617875 TMEM14CQ9P0S9 112 aa12.41□□□□□ -0.42
RECQL4-209ENST00000617875 KIR2DL4Q99706 377 aa12.41□□□□□ -0.42
RECQL4-209ENST00000617875 SRSF8Q9BRL6 282 aaKnown RBP12.41□□□□□ -0.42
RECQL4-209ENST00000617875 SLC50A1Q9BRV3 221 aa12.41□□□□□ -0.42
RECQL4-209ENST00000617875 KLK9Q9UKQ9 250 aa12.41□□□□□ -0.42
RECQL4-209ENST00000617875 RPL39LQ96EH5 51 aaKnown RBP12.4□□□□□ -0.42
RECQL4-209ENST00000617875 PIMREGQ9BSJ6 248 aa12.4□□□□□ -0.42
RECQL4-209ENST00000617875 LINC01549A6NIU2 74 aa12.4□□□□□ -0.42
RECQL4-209ENST00000617875 IGLV11-55A0A075B6I3 123 aa12.4□□□□□ -0.42
RECQL4-209ENST00000617875 A0A1B0GV72 72 aa12.4□□□□□ -0.42
RECQL4-209ENST00000617875 UCNP55089 124 aa12.4□□□□□ -0.42
RECQL4-209ENST00000617875 C2orf91Q6ZV80 131 aa12.4□□□□□ -0.42
RECQL4-209ENST00000617875 TRAV2A0A0B4J234 112 aa12.39□□□□□ -0.43
RECQL4-209ENST00000617875 LGALS3P17931 250 aaKnown RBP12.39□□□□□ -0.43
RECQL4-209ENST00000617875 ADORA2A-AS1P86434 159 aa12.39□□□□□ -0.43
RECQL4-209ENST00000617875 RNF5Q99942 180 aa12.39□□□□□ -0.43
RECQL4-209ENST00000617875 SLC25A16P16260 332 aa12.39□□□□□ -0.43
RECQL4-209ENST00000617875 ANXA2RQ3ZCQ2 193 aa12.39□□□□□ -0.43
RECQL4-209ENST00000617875 DUX3Q96PT4 197 aa12.39□□□□□ -0.43
RECQL4-209ENST00000617875 M0R1W7 72 aa12.39□□□□□ -0.43
RECQL4-209ENST00000617875 IGHV4-39P01824 125 aa12.39□□□□□ -0.43
RECQL4-209ENST00000617875 HLA-DRB4P13762 266 aa12.39□□□□□ -0.43
RECQL4-209ENST00000617875 KLHL30-AS1Q8NEE0 82 aa12.39□□□□□ -0.43
RECQL4-209ENST00000617875 HLA-DRB4X5D2U9 266 aa12.39□□□□□ -0.43
RECQL4-209ENST00000617875 SMG1Q96Q15 3661 aaKnown RBP12.38□□□□□ -0.43
RECQL4-209ENST00000617875 HOXB4P17483 251 aaPredicted RBP12.38□□□□□ -0.43
RECQL4-209ENST00000617875 RAB9AP51151 201 aa12.38□□□□□ -0.43
RECQL4-209ENST00000617875 ID1P41134 155 aa12.38□□□□□ -0.43
RECQL4-209ENST00000617875 PDE6HQ13956 83 aa12.38□□□□□ -0.43
RECQL4-209ENST00000617875 RNASE13Q5GAN3 156 aaKnown RBP12.38□□□□□ -0.43
RECQL4-209ENST00000617875 Q8N9W7 124 aa12.38□□□□□ -0.43
RECQL4-209ENST00000617875 TRAV21A0A0B4J279 112 aa12.37□□□□□ -0.43
RECQL4-209ENST00000617875 MYCNOSP40205 109 aa12.37□□□□□ -0.43
RECQL4-209ENST00000617875 SPINK13Q1W4C9 94 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms