RNA–Protein interactions for RNA: ENST00000617697.4

SLC39A1-210, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLC39A1, Length 2,214 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-210ENST00000617697 RELNP78509 3460 aa13.57□□□□□ -0.24
SLC39A1-210ENST00000617697 RHPN1-AS1Q9BWJ2 59 aa13.56□□□□□ -0.24
SLC39A1-210ENST00000617697 DPH3P1Q9H4G8 78 aa13.56□□□□□ -0.24
SLC39A1-210ENST00000617697 PHLDA3Q9Y5J5 127 aa13.56□□□□□ -0.24
SLC39A1-210ENST00000617697 C7orf71A4D174 169 aa13.56□□□□□ -0.24
SLC39A1-210ENST00000617697 TMEM8BA6NDV4 472 aa13.56□□□□□ -0.24
SLC39A1-210ENST00000617697 K7EMI3 77 aa13.56□□□□□ -0.24
SLC39A1-210ENST00000617697 K7EMT4 169 aa13.56□□□□□ -0.24
SLC39A1-210ENST00000617697 ID1P41134 155 aa13.56□□□□□ -0.24
SLC39A1-210ENST00000617697 AP1S3Q96PC3 154 aa13.56□□□□□ -0.24
SLC39A1-210ENST00000617697 CBY1Q9Y3M2 126 aa13.56□□□□□ -0.24
SLC39A1-210ENST00000617697 SPTBN4Q9H254 2564 aa13.56□□□□□ -0.24
SLC39A1-210ENST00000617697 J3KRW8 73 aa13.55□□□□□ -0.24
SLC39A1-210ENST00000617697 APRG1Q8IVJ8 170 aa13.55□□□□□ -0.24
SLC39A1-210ENST00000617697 KLK15Q9H2R5 256 aa13.55□□□□□ -0.24
SLC39A1-210ENST00000617697 PPP1R17O96001 155 aa13.55□□□□□ -0.24
SLC39A1-210ENST00000617697 BLCAPP62952 87 aa13.55□□□□□ -0.24
SLC39A1-210ENST00000617697 ORMDL2Q53FV1 153 aa13.55□□□□□ -0.24
SLC39A1-210ENST00000617697 FAM19A4Q96LR4 140 aa13.55□□□□□ -0.24
SLC39A1-210ENST00000617697 C20orf78Q9BR46 151 aa13.55□□□□□ -0.24
SLC39A1-210ENST00000617697 SMIM2Q9BVW6 85 aa13.55□□□□□ -0.24
SLC39A1-210ENST00000617697 TRAV26-2A0A0B4J265 109 aa13.54□□□□□ -0.24
SLC39A1-210ENST00000617697 KIR3DS1Q14943 382 aa13.54□□□□□ -0.24
SLC39A1-210ENST00000617697 K7EP13 123 aa13.54□□□□□ -0.24
SLC39A1-210ENST00000617697 M0R381 172 aa13.54□□□□□ -0.24
SLC39A1-210ENST00000617697 HLA-DRB4P13762 266 aa13.54□□□□□ -0.24
SLC39A1-210ENST00000617697 TM4SF20Q53R12 229 aa13.54□□□□□ -0.24
SLC39A1-210ENST00000617697 HLA-DRB4X5D2U9 266 aa13.54□□□□□ -0.24
SLC39A1-210ENST00000617697 SLC25A16P16260 332 aa13.53□□□□□ -0.24
SLC39A1-210ENST00000617697 RNASE4P34096 147 aaKnown RBP13.53□□□□□ -0.24
SLC39A1-210ENST00000617697 CFHR3Q02985 330 aa13.53□□□□□ -0.24
SLC39A1-210ENST00000617697 SPOCK3Q9BQ16 436 aa13.53□□□□□ -0.24
SLC39A1-210ENST00000617697 H3BRM9 83 aa13.52□□□□□ -0.24
SLC39A1-210ENST00000617697 ANXA2RQ3ZCQ2 193 aa13.52□□□□□ -0.24
SLC39A1-210ENST00000617697 Q6ZQT7 251 aa13.52□□□□□ -0.24
SLC39A1-210ENST00000617697 HIGD1BQ9P298 99 aa13.52□□□□□ -0.24
SLC39A1-210ENST00000617697 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.52□□□□□ -0.25
SLC39A1-210ENST00000617697 PLNP26678 52 aa13.52□□□□□ -0.25
SLC39A1-210ENST00000617697 TCTAP57738 103 aa13.52□□□□□ -0.25
SLC39A1-210ENST00000617697 ADAMTSL5Q6ZMM2 481 aa13.52□□□□□ -0.25
SLC39A1-210ENST00000617697 SUMO2P61956 95 aaKnown RBP13.51□□□□□ -0.25
SLC39A1-210ENST00000617697 AMMECR1LQ6DCA0 310 aa13.51□□□□□ -0.25
SLC39A1-210ENST00000617697 PCP2Q8IVA1 136 aa13.51□□□□□ -0.25
SLC39A1-210ENST00000617697 HHLA3Q9XRX5 114 aa13.51□□□□□ -0.25
SLC39A1-210ENST00000617697 TMEM89A2RUT3 159 aa13.51□□□□□ -0.25
SLC39A1-210ENST00000617697 A0A087WX48 190 aa13.5□□□□□ -0.25
SLC39A1-210ENST00000617697 ZC2HC1BQ5TFG8 222 aa13.49□□□□□ -0.25
SLC39A1-210ENST00000617697 ERASQ7Z444 233 aa13.49□□□□□ -0.25
SLC39A1-210ENST00000617697 ITPR1Q14643 2758 aa13.49□□□□□ -0.25
SLC39A1-210ENST00000617697 NCOR2Q9Y618 2525 aa13.49□□□□□ -0.25
SLC39A1-210ENST00000617697 IGKV3-7A0A075B6H7 116 aa13.49□□□□□ -0.25
SLC39A1-210ENST00000617697 TRAV12-1A0A0B4J245 112 aa13.49□□□□□ -0.25
SLC39A1-210ENST00000617697 GTF2H5Q6ZYL4 71 aa13.49□□□□□ -0.25
SLC39A1-210ENST00000617697 CHD8Q9HCK8 2581 aa13.49□□□□□ -0.25
SLC39A1-210ENST00000617697 CACNA1BQ00975 2339 aa13.49□□□□□ -0.25
SLC39A1-210ENST00000617697 C9orf118A6NHY6 69 aa13.48□□□□□ -0.25
SLC39A1-210ENST00000617697 J3QLI3 93 aa13.48□□□□□ -0.25
SLC39A1-210ENST00000617697 MGPP08493 103 aa13.48□□□□□ -0.25
SLC39A1-210ENST00000617697 C14orf178Q8N769 122 aaPredicted RBP13.48□□□□□ -0.25
SLC39A1-210ENST00000617697 LINC01356Q8N9X3 169 aa13.48□□□□□ -0.25
SLC39A1-210ENST00000617697 TMEM160Q9NX00 188 aa13.48□□□□□ -0.25
SLC39A1-210ENST00000617697 F6UB75 175 aa13.48□□□□□ -0.25
SLC39A1-210ENST00000617697 FAM159AQ6UWV7 190 aa13.48□□□□□ -0.25
SLC39A1-210ENST00000617697 Q6ZS46 218 aa13.48□□□□□ -0.25
SLC39A1-210ENST00000617697 MRPL35Q9NZE8 188 aaKnown RBP13.48□□□□□ -0.25
SLC39A1-210ENST00000617697 LCNL1Q6ZST4 164 aa13.47□□□□□ -0.25
SLC39A1-210ENST00000617697 RASL10AQ92737 203 aa13.47□□□□□ -0.25
SLC39A1-210ENST00000617697 AKAP6Q13023 2319 aa13.47□□□□□ -0.25
SLC39A1-210ENST00000617697 KLLNB2CW77 178 aa13.47□□□□□ -0.25
SLC39A1-210ENST00000617697 H7C1H1 209 aa13.47□□□□□ -0.25
SLC39A1-210ENST00000617697 NXPH4O95158 308 aa13.47□□□□□ -0.25
SLC39A1-210ENST00000617697 PSMB8P28062 276 aa13.47□□□□□ -0.25
SLC39A1-210ENST00000617697 TOMM6Q96B49 74 aa13.47□□□□□ -0.25
SLC39A1-210ENST00000617697 TRAV8-6A0A0B4J262 113 aa13.46□□□□□ -0.25
SLC39A1-210ENST00000617697 LINC01549A6NIU2 74 aa13.46□□□□□ -0.25
SLC39A1-210ENST00000617697 DEFB1P60022 68 aa13.46□□□□□ -0.25
SLC39A1-210ENST00000617697 GTSCR1Q86UQ5 136 aa13.46□□□□□ -0.25
SLC39A1-210ENST00000617697 SCGB3A1Q96QR1 104 aa13.46□□□□□ -0.25
SLC39A1-210ENST00000617697 AVPP01185 164 aa13.45□□□□□ -0.26
SLC39A1-210ENST00000617697 ODF3Q96PU9 254 aa13.45□□□□□ -0.26
SLC39A1-210ENST00000617697 CHAC1Q9BUX1 264 aa13.45□□□□□ -0.26
SLC39A1-210ENST00000617697 IGKV2D-26A0A0A0MRZ7 120 aa13.45□□□□□ -0.26
SLC39A1-210ENST00000617697 GAGE10A6NGK3 116 aa13.45□□□□□ -0.26
SLC39A1-210ENST00000617697 F8VRH5 84 aa13.45□□□□□ -0.26
SLC39A1-210ENST00000617697 RNASE3P12724 160 aaKnown RBP13.45□□□□□ -0.26
SLC39A1-210ENST00000617697 GNRH2O43555 120 aa13.44□□□□□ -0.26
SLC39A1-210ENST00000617697 POM121L12Q8N7R1 296 aa13.44□□□□□ -0.26
SLC39A1-210ENST00000617697 DCANP1Q8TF63 244 aa13.44□□□□□ -0.26
SLC39A1-210ENST00000617697 SNRPD3P62318 126 aaKnown RBP13.44□□□□□ -0.26
SLC39A1-210ENST00000617697 DEFB112Q30KQ8 113 aa13.44□□□□□ -0.26
SLC39A1-210ENST00000617697 IGHV4-59P01825 116 aa13.43□□□□□ -0.26
SLC39A1-210ENST00000617697 CHTOPQ9Y3Y2 248 aaKnown RBP13.43□□□□□ -0.26
SLC39A1-210ENST00000617697 SMIM13P0DJ93 91 aa13.43□□□□□ -0.26
SLC39A1-210ENST00000617697 SRD5A1P18405 259 aa13.43□□□□□ -0.26
SLC39A1-210ENST00000617697 GCSHP23434 173 aa13.43□□□□□ -0.26
SLC39A1-210ENST00000617697 RPL32P62910 135 aaKnown RBP13.43□□□□□ -0.26
SLC39A1-210ENST00000617697 RPL39LQ96EH5 51 aaKnown RBP13.43□□□□□ -0.26
SLC39A1-210ENST00000617697 TRBV25-1A0A075B6N4 114 aa13.42□□□□□ -0.26
SLC39A1-210ENST00000617697 TAL2Q16559 108 aa13.42□□□□□ -0.26
SLC39A1-210ENST00000617697 TMEM95Q3KNT9 176 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms