RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 OR11H1Q8NG94 326 aa13.03□□□□□ -0.32
PCDHGC3-205ENST00000617641 LINC01619G3V211 115 aa13.02□□□□□ -0.32
PCDHGC3-205ENST00000617641 FAM104BQ5XKR9 115 aa13.02□□□□□ -0.32
PCDHGC3-205ENST00000617641 ADAMTSL5Q6ZMM2 481 aa13.02□□□□□ -0.32
PCDHGC3-205ENST00000617641 CNFNQ9BYD5 112 aa13.02□□□□□ -0.32
PCDHGC3-205ENST00000617641 NAGKQ9UJ70 344 aa13.02□□□□□ -0.32
PCDHGC3-205ENST00000617641 KLHL30-AS1Q8NEE0 82 aa13.02□□□□□ -0.33
PCDHGC3-205ENST00000617641 K7EQG2 157 aa13.01□□□□□ -0.33
PCDHGC3-205ENST00000617641 PSMG4Q5JS54 123 aa13.01□□□□□ -0.33
PCDHGC3-205ENST00000617641 SMR3AQ99954 134 aa13.01□□□□□ -0.33
PCDHGC3-205ENST00000617641 RNASE4P34096 147 aaKnown RBP13.01□□□□□ -0.33
PCDHGC3-205ENST00000617641 DPF1Q92782 380 aa13.01□□□□□ -0.33
PCDHGC3-205ENST00000617641 NF1P21359 2839 aa13.01□□□□□ -0.33
PCDHGC3-205ENST00000617641 CSN3P07498 182 aa13□□□□□ -0.33
PCDHGC3-205ENST00000617641 KRTDAPP60985 99 aa13□□□□□ -0.33
PCDHGC3-205ENST00000617641 OR1N2Q8NGR9 330 aa13□□□□□ -0.33
PCDHGC3-205ENST00000617641 PRO1933Q9H354 126 aa13□□□□□ -0.33
PCDHGC3-205ENST00000617641 CHTOPQ9Y3Y2 248 aaKnown RBP13□□□□□ -0.33
PCDHGC3-205ENST00000617641 TRAV21A0A0B4J279 112 aa13□□□□□ -0.33
PCDHGC3-205ENST00000617641 D6R8Y8 96 aa13□□□□□ -0.33
PCDHGC3-205ENST00000617641 M0R2Z0 102 aa13□□□□□ -0.33
PCDHGC3-205ENST00000617641 PKIAP61925 76 aa13□□□□□ -0.33
PCDHGC3-205ENST00000617641 PMCHL1Q16048 86 aa13□□□□□ -0.33
PCDHGC3-205ENST00000617641 MRPL51Q4U2R6 128 aaKnown RBP13□□□□□ -0.33
PCDHGC3-205ENST00000617641 WFDC12Q8WWY7 111 aa13□□□□□ -0.33
PCDHGC3-205ENST00000617641 SNRPD3P62318 126 aaKnown RBP12.99□□□□□ -0.33
PCDHGC3-205ENST00000617641 C11orf44Q8N8P7 122 aa12.99□□□□□ -0.33
PCDHGC3-205ENST00000617641 OR10AG1Q8NH19 301 aa12.99□□□□□ -0.33
PCDHGC3-205ENST00000617641 TSTD3H0UI37 97 aa12.99□□□□□ -0.33
PCDHGC3-205ENST00000617641 APRG1Q8IVJ8 170 aa12.99□□□□□ -0.33
PCDHGC3-205ENST00000617641 TMEM191AQ9H0A3 160 aa12.99□□□□□ -0.33
PCDHGC3-205ENST00000617641 LINC00614P0C842 121 aa12.98□□□□□ -0.33
PCDHGC3-205ENST00000617641 CHCHD1Q96BP2 118 aaKnown RBP12.98□□□□□ -0.33
PCDHGC3-205ENST00000617641 U3KQK5 164 aa12.98□□□□□ -0.33
PCDHGC3-205ENST00000617641 TRBV7-9A0A0J9YWB2 115 aa12.97□□□□□ -0.33
PCDHGC3-205ENST00000617641 H3BVH4 76 aa12.97□□□□□ -0.33
PCDHGC3-205ENST00000617641 ZNF664Q8N3J9 261 aa12.97□□□□□ -0.33
PCDHGC3-205ENST00000617641 DLX4Q92988 240 aaPredicted RBP12.97□□□□□ -0.33
PCDHGC3-205ENST00000617641 SMKR1H3BMG3 65 aa12.97□□□□□ -0.33
PCDHGC3-205ENST00000617641 RNASE1P07998 156 aaKnown RBP12.97□□□□□ -0.33
PCDHGC3-205ENST00000617641 OR9G4Q8NGQ1 327 aa12.97□□□□□ -0.33
PCDHGC3-205ENST00000617641 PRELID3AQ96N28 172 aa12.97□□□□□ -0.33
PCDHGC3-205ENST00000617641 TIMM8BQ9Y5J9 83 aaPredicted RBP12.97□□□□□ -0.33
PCDHGC3-205ENST00000617641 C3orf79P0CE67 100 aa12.96□□□□□ -0.33
PCDHGC3-205ENST00000617641 ANXA2RQ3ZCQ2 193 aa12.96□□□□□ -0.33
PCDHGC3-205ENST00000617641 ORMDL3Q8N138 153 aa12.96□□□□□ -0.33
PCDHGC3-205ENST00000617641 RNF185Q96GF1 192 aa12.96□□□□□ -0.33
PCDHGC3-205ENST00000617641 MTORP42345 2549 aa12.96□□□□□ -0.33
PCDHGC3-205ENST00000617641 IGHV1-24A0A0C4DH33 117 aa12.96□□□□□ -0.34
PCDHGC3-205ENST00000617641 A0A0J9YX75 114 aa12.96□□□□□ -0.34
PCDHGC3-205ENST00000617641 A0A1W2PRX2 142 aa12.96□□□□□ -0.34
PCDHGC3-205ENST00000617641 KLLNB2CW77 178 aa12.96□□□□□ -0.34
PCDHGC3-205ENST00000617641 SNAI2O43623 268 aa12.96□□□□□ -0.34
PCDHGC3-205ENST00000617641 OR5AL1P0C617 328 aa12.96□□□□□ -0.34
PCDHGC3-205ENST00000617641 CD28P10747 220 aa12.96□□□□□ -0.34
PCDHGC3-205ENST00000617641 PEMTQ9UBM1 199 aa12.96□□□□□ -0.34
PCDHGC3-205ENST00000617641 NCR2O95944 276 aa12.95□□□□□ -0.34
PCDHGC3-205ENST00000617641 IGKV3-20P01619 116 aa12.95□□□□□ -0.34
PCDHGC3-205ENST00000617641 DMRTA1Q5VZB9 504 aa12.95□□□□□ -0.34
PCDHGC3-205ENST00000617641 Q8N976 141 aa12.95□□□□□ -0.34
PCDHGC3-205ENST00000617641 GOLT1BQ9Y3E0 138 aa12.95□□□□□ -0.34
PCDHGC3-205ENST00000617641 CKS2P33552 79 aa12.95□□□□□ -0.34
PCDHGC3-205ENST00000617641 SCGB2A2Q13296 93 aa12.95□□□□□ -0.34
PCDHGC3-205ENST00000617641 LOC389332A0A1B0GUA5 103 aa12.94□□□□□ -0.34
PCDHGC3-205ENST00000617641 SPRY2O43597 315 aa12.94□□□□□ -0.34
PCDHGC3-205ENST00000617641 LINC01006Q8NI28 216 aa12.94□□□□□ -0.34
PCDHGC3-205ENST00000617641 EVI2AP22794 236 aa12.94□□□□□ -0.34
PCDHGC3-205ENST00000617641 SPANXN1Q5VSR9 72 aa12.94□□□□□ -0.34
PCDHGC3-205ENST00000617641 EBLN2Q6P2I7 272 aa12.94□□□□□ -0.34
PCDHGC3-205ENST00000617641 PRSS3P2Q8NHM4 247 aa12.94□□□□□ -0.34
PCDHGC3-205ENST00000617641 ZNF418Q8TF45 676 aaPredicted RBP12.94□□□□□ -0.34
PCDHGC3-205ENST00000617641 RAX2Q96IS3 184 aa12.94□□□□□ -0.34
PCDHGC3-205ENST00000617641 GNRH2O43555 120 aa12.93□□□□□ -0.34
PCDHGC3-205ENST00000617641 NPYP01303 97 aa12.93□□□□□ -0.34
PCDHGC3-205ENST00000617641 IFI27P40305 119 aaPredicted RBP12.93□□□□□ -0.34
PCDHGC3-205ENST00000617641 TMEM160Q9NX00 188 aa12.93□□□□□ -0.34
PCDHGC3-205ENST00000617641 GAS8-AS1O95177 125 aa12.93□□□□□ -0.34
PCDHGC3-205ENST00000617641 S100A4P26447 101 aaKnown RBP12.93□□□□□ -0.34
PCDHGC3-205ENST00000617641 ASIPP42127 132 aa12.93□□□□□ -0.34
PCDHGC3-205ENST00000617641 TDRG1Q3Y452 100 aa12.93□□□□□ -0.34
PCDHGC3-205ENST00000617641 TEX43Q6ZNM6 134 aa12.93□□□□□ -0.34
PCDHGC3-205ENST00000617641 SIGLEC8Q9NYZ4 499 aa12.93□□□□□ -0.34
PCDHGC3-205ENST00000617641 IGHV4-4A0A075B6R2 117 aa12.92□□□□□ -0.34
PCDHGC3-205ENST00000617641 LY6G6DO95868 133 aa12.92□□□□□ -0.34
PCDHGC3-205ENST00000617641 ZNF25P17030 456 aaPredicted RBP12.92□□□□□ -0.34
PCDHGC3-205ENST00000617641 HILS1P60008 231 aa12.92□□□□□ -0.34
PCDHGC3-205ENST00000617641 CACNG7P62955 275 aa12.92□□□□□ -0.34
PCDHGC3-205ENST00000617641 FA2HQ7L5A8 372 aa12.92□□□□□ -0.34
PCDHGC3-205ENST00000617641 TMEM61Q8N0U2 210 aa12.92□□□□□ -0.34
PCDHGC3-205ENST00000617641 C16orf95Q9H693 158 aa12.92□□□□□ -0.34
PCDHGC3-205ENST00000617641 AGRNO00468 2067 aa12.92□□□□□ -0.34
PCDHGC3-205ENST00000617641 TRAV12-3A0A0B4J271 114 aa12.91□□□□□ -0.34
PCDHGC3-205ENST00000617641 LINC00173Q6ZV60 143 aa12.91□□□□□ -0.34
PCDHGC3-205ENST00000617641 CITED2Q99967 270 aaPredicted RBP12.91□□□□□ -0.34
PCDHGC3-205ENST00000617641 AP5S1Q9NUS5 200 aa12.91□□□□□ -0.34
PCDHGC3-205ENST00000617641 SORL1Q92673 2214 aa12.91□□□□□ -0.34
PCDHGC3-205ENST00000617641 LEPP41159 167 aa12.91□□□□□ -0.34
PCDHGC3-205ENST00000617641 DYNLRB2Q8TF09 96 aa12.91□□□□□ -0.34
PCDHGC3-205ENST00000617641 ODF3Q96PU9 254 aa12.91□□□□□ -0.34
PCDHGC3-205ENST00000617641 TRAV12-2A0A075B6T6 113 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms