RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	ATP5G2	Q06055	141 aa		10.69	□□□□□ -0.7
CACNA1C-231	ENST00000616390	GAS8-AS1	O95177	125 aa		10.69	□□□□□ -0.7
CACNA1C-231	ENST00000616390	TRGV3	P03979	118 aa		10.69	□□□□□ -0.7
CACNA1C-231	ENST00000616390	SEC61G	P60059	68 aa		10.69	□□□□□ -0.7
CACNA1C-231	ENST00000616390	METTL26	Q96S19	204 aa		10.69	□□□□□ -0.7
CACNA1C-231	ENST00000616390	TRAV41	A0A0B4J266	112 aa		10.68	□□□□□ -0.7
CACNA1C-231	ENST00000616390	TRBV12-3	P01733	135 aa		10.68	□□□□□ -0.7
CACNA1C-231	ENST00000616390	ORMDL3	Q8N138	153 aa		10.68	□□□□□ -0.7
CACNA1C-231	ENST00000616390	ZNF418	Q8TF45	676 aa	Predicted RBP	10.68	□□□□□ -0.7
CACNA1C-231	ENST00000616390	CCL19	Q99731	98 aa		10.68	□□□□□ -0.7
CACNA1C-231	ENST00000616390	FABP5P3	A8MUU1	101 aa		10.68	□□□□□ -0.7
CACNA1C-231	ENST00000616390	OR10AG1	Q8NH19	301 aa		10.68	□□□□□ -0.7
CACNA1C-231	ENST00000616390	SPATA25	Q9BR10	227 aa		10.68	□□□□□ -0.7
CACNA1C-231	ENST00000616390		A0A087WX48	190 aa		10.67	□□□□□ -0.7
CACNA1C-231	ENST00000616390	NPY	P01303	97 aa		10.67	□□□□□ -0.7
CACNA1C-231	ENST00000616390	EVI2A	P22794	236 aa		10.67	□□□□□ -0.7
CACNA1C-231	ENST00000616390	DEFB1	P60022	68 aa		10.67	□□□□□ -0.7
CACNA1C-231	ENST00000616390	RPL11	P62913	178 aa	Known RBP	10.67	□□□□□ -0.7
CACNA1C-231	ENST00000616390	CRX	O43186	299 aa	Predicted RBP	10.67	□□□□□ -0.7
CACNA1C-231	ENST00000616390	AGPAT4-IT1	Q9H0P7	198 aa		10.67	□□□□□ -0.7
CACNA1C-231	ENST00000616390	ZNF493	Q6ZR52	646 aa		10.66	□□□□□ -0.7
CACNA1C-231	ENST00000616390	C8orf86	Q6ZUL3	223 aa		10.66	□□□□□ -0.7
CACNA1C-231	ENST00000616390	MOB4	Q9Y3A3	225 aa		10.66	□□□□□ -0.7
CACNA1C-231	ENST00000616390	IGHV1-69D	A0A0B4J2H0	117 aa		10.66	□□□□□ -0.7
CACNA1C-231	ENST00000616390	SPRY2	O43597	315 aa		10.66	□□□□□ -0.7
CACNA1C-231	ENST00000616390	IGHV1-69	P01742	117 aa		10.66	□□□□□ -0.7
CACNA1C-231	ENST00000616390	ZNF575	Q86XF7	245 aa		10.66	□□□□□ -0.7
CACNA1C-231	ENST00000616390	C16orf92	Q96LL3	132 aa		10.66	□□□□□ -0.7
CACNA1C-231	ENST00000616390	ZNF747	Q9BV97	191 aa		10.66	□□□□□ -0.7
CACNA1C-231	ENST00000616390	GATA1	P15976	413 aa	Predicted RBP	10.66	□□□□□ -0.7
CACNA1C-231	ENST00000616390	PIFO	Q8TCI5	191 aa		10.66	□□□□□ -0.7
CACNA1C-231	ENST00000616390	C18orf15	Q96N68	181 aa		10.66	□□□□□ -0.7
CACNA1C-231	ENST00000616390	TRBV7-1	A0A0A6YYK4	115 aa		10.65	□□□□□ -0.7
CACNA1C-231	ENST00000616390	TRAV8-2	A0A0B4J237	113 aa		10.65	□□□□□ -0.7
CACNA1C-231	ENST00000616390		H3BUX3	64 aa		10.65	□□□□□ -0.7
CACNA1C-231	ENST00000616390	PAX8	Q06710	450 aa		10.65	□□□□□ -0.7
CACNA1C-231	ENST00000616390	MPV17L2	Q567V2	206 aa		10.65	□□□□□ -0.7
CACNA1C-231	ENST00000616390	TMEM78	Q5T7P6	136 aa		10.65	□□□□□ -0.7
CACNA1C-231	ENST00000616390	UNQ9165/PRO28630	Q6UXU0	137 aa		10.65	□□□□□ -0.7
CACNA1C-231	ENST00000616390		Q6ZS46	218 aa		10.65	□□□□□ -0.7
CACNA1C-231	ENST00000616390	ANKRD17	O75179	2603 aa	Known RBP	10.65	□□□□□ -0.7
CACNA1C-231	ENST00000616390		A0A096LNJ9	63 aa		10.65	□□□□□ -0.71
CACNA1C-231	ENST00000616390	BLCAP	P62952	87 aa		10.65	□□□□□ -0.71
CACNA1C-231	ENST00000616390	C11orf21	Q9P2W6	132 aa		10.65	□□□□□ -0.71
CACNA1C-231	ENST00000616390	SORL1	Q92673	2214 aa		10.64	□□□□□ -0.71
CACNA1C-231	ENST00000616390	IGHV4-30-2	A0A087WSY4	118 aa		10.64	□□□□□ -0.71
CACNA1C-231	ENST00000616390	FOXE3	Q13461	319 aa		10.64	□□□□□ -0.71
CACNA1C-231	ENST00000616390	DOPEY1	Q5JWR5	2465 aa		10.64	□□□□□ -0.71
CACNA1C-231	ENST00000616390	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	10.64	□□□□□ -0.71
CACNA1C-231	ENST00000616390	IGF1	P05019	195 aa		10.64	□□□□□ -0.71
CACNA1C-231	ENST00000616390	IGLC6	P0CF74	106 aa		10.64	□□□□□ -0.71
CACNA1C-231	ENST00000616390	UFSP1	Q6NVU6	142 aa		10.64	□□□□□ -0.71
CACNA1C-231	ENST00000616390	LRRC75A-AS1	Q8N1F1	130 aa		10.64	□□□□□ -0.71
CACNA1C-231	ENST00000616390	KLK15	Q9H2R5	256 aa		10.64	□□□□□ -0.71
CACNA1C-231	ENST00000616390	IGKV3D-20	A0A0C4DH25	116 aa		10.63	□□□□□ -0.71
CACNA1C-231	ENST00000616390	NUDT3	O95989	172 aa		10.63	□□□□□ -0.71
CACNA1C-231	ENST00000616390	HIST1H1A	Q02539	215 aa	Predicted RBP	10.63	□□□□□ -0.71
CACNA1C-231	ENST00000616390	SLC25A34	Q6PIV7	304 aa		10.63	□□□□□ -0.71
CACNA1C-231	ENST00000616390	GATD1	Q8NB37	220 aa		10.63	□□□□□ -0.71
CACNA1C-231	ENST00000616390	SLC50A1	Q9BRV3	221 aa		10.63	□□□□□ -0.71
CACNA1C-231	ENST00000616390		F5H768	121 aa		10.63	□□□□□ -0.71
CACNA1C-231	ENST00000616390	CACNG7	P62955	275 aa		10.63	□□□□□ -0.71
CACNA1C-231	ENST00000616390	ST20	Q9HBF5	79 aa		10.63	□□□□□ -0.71
CACNA1C-231	ENST00000616390		A0A087X0K7	114 aa		10.62	□□□□□ -0.71
CACNA1C-231	ENST00000616390	SRD5A1	P18405	259 aa		10.62	□□□□□ -0.71
CACNA1C-231	ENST00000616390	EDN2	P20800	178 aa		10.62	□□□□□ -0.71
CACNA1C-231	ENST00000616390	TMEM190	Q8WZ59	177 aa		10.62	□□□□□ -0.71
CACNA1C-231	ENST00000616390	LRRK2	Q5S007	2527 aa		10.62	□□□□□ -0.71
CACNA1C-231	ENST00000616390	TRAV26-2	A0A0B4J265	109 aa		10.62	□□□□□ -0.71
CACNA1C-231	ENST00000616390	GAGE10	A6NGK3	116 aa		10.62	□□□□□ -0.71
CACNA1C-231	ENST00000616390	LINC01545	Q5VT33	79 aa		10.62	□□□□□ -0.71
CACNA1C-231	ENST00000616390	C20orf173	Q96LM9	149 aa		10.61	□□□□□ -0.71
CACNA1C-231	ENST00000616390	COX8C	Q7Z4L0	72 aa		10.61	□□□□□ -0.71
CACNA1C-231	ENST00000616390	MAPK1IP1L	Q8NDC0	245 aa		10.61	□□□□□ -0.71
CACNA1C-231	ENST00000616390	C10orf105	Q8TEF2	133 aa		10.61	□□□□□ -0.71
CACNA1C-231	ENST00000616390	RNF185	Q96GF1	192 aa		10.61	□□□□□ -0.71
CACNA1C-231	ENST00000616390	C1QTNF4	Q9BXJ3	329 aa		10.61	□□□□□ -0.71
CACNA1C-231	ENST00000616390	SCRT2	Q9NQ03	307 aa		10.61	□□□□□ -0.71
CACNA1C-231	ENST00000616390		U3KQK5	164 aa		10.61	□□□□□ -0.71
CACNA1C-231	ENST00000616390		F6UB75	175 aa		10.6	□□□□□ -0.71
CACNA1C-231	ENST00000616390	HBD	P02042	147 aa		10.6	□□□□□ -0.71
CACNA1C-231	ENST00000616390	ANAPC13	Q9BS18	74 aa		10.6	□□□□□ -0.71
CACNA1C-231	ENST00000616390	TRAV8-6	A0A0B4J262	113 aa		10.59	□□□□□ -0.71
CACNA1C-231	ENST00000616390	AVP	P01185	164 aa		10.59	□□□□□ -0.71
CACNA1C-231	ENST00000616390	PRR9	Q5T870	116 aa		10.59	□□□□□ -0.71
CACNA1C-231	ENST00000616390	DEFB125	Q8N687	156 aa		10.59	□□□□□ -0.71
CACNA1C-231	ENST00000616390	OR9G4	Q8NGQ1	327 aa		10.59	□□□□□ -0.71
CACNA1C-231	ENST00000616390	ABCA12	Q86UK0	2595 aa		10.59	□□□□□ -0.71
CACNA1C-231	ENST00000616390		H3BVH4	76 aa		10.59	□□□□□ -0.71
CACNA1C-231	ENST00000616390	LEP	P41159	167 aa		10.59	□□□□□ -0.71
CACNA1C-231	ENST00000616390	LINC01559	Q495D7	138 aa		10.59	□□□□□ -0.71
CACNA1C-231	ENST00000616390	SPANXN1	Q5VSR9	72 aa		10.59	□□□□□ -0.71
CACNA1C-231	ENST00000616390	MRAP	Q8TCY5	172 aa		10.59	□□□□□ -0.71
CACNA1C-231	ENST00000616390	MAP1LC3A	Q9H492	121 aa		10.59	□□□□□ -0.71
CACNA1C-231	ENST00000616390	IFI27L1	Q96BM0	104 aa		10.58	□□□□□ -0.72
CACNA1C-231	ENST00000616390	NAA38	Q9BRA0	125 aa	Known RBP	10.58	□□□□□ -0.72
CACNA1C-231	ENST00000616390	CREBBP	Q92793	2442 aa		10.58	□□□□□ -0.72
CACNA1C-231	ENST00000616390	ZNF462	Q96JM2	2506 aa		10.58	□□□□□ -0.72
CACNA1C-231	ENST00000616390	RBAKDN	A6NC62	111 aa		10.58	□□□□□ -0.72
CACNA1C-231	ENST00000616390	FAM223B	A6NKX1	122 aa		10.58	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms