RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 PRR4Q16378 134 aa10.05□□□□□ -0.8
TCF4-248ENST00000616053 ZNF493Q6ZR52 646 aa10.05□□□□□ -0.8
TCF4-248ENST00000616053 IGKV1-12A0A0C4DH73 117 aa10.04□□□□□ -0.8
TCF4-248ENST00000616053 NMBP08949 121 aa10.04□□□□□ -0.8
TCF4-248ENST00000616053 WDR83OSQ9Y284 106 aa10.04□□□□□ -0.8
TCF4-248ENST00000616053 TRBV12-3P01733 135 aa10.04□□□□□ -0.8
TCF4-248ENST00000616053 Q8N9W7 124 aa10.04□□□□□ -0.8
TCF4-248ENST00000616053 WFDC11Q8NEX6 87 aa10.04□□□□□ -0.8
TCF4-248ENST00000616053 CACNA1HO95180 2353 aa10.04□□□□□ -0.8
TCF4-248ENST00000616053 DAZ2Q13117 558 aaKnown RBP10.04□□□□□ -0.8
TCF4-248ENST00000616053 DAZ4Q86SG3 579 aaKnown RBP10.04□□□□□ -0.8
TCF4-248ENST00000616053 DAZ3Q9NR90 486 aaKnown RBP10.04□□□□□ -0.8
TCF4-248ENST00000616053 LYPD3O95274 346 aa10.04□□□□□ -0.8
TCF4-248ENST00000616053 H2BFSP57053 126 aa10.04□□□□□ -0.8
TCF4-248ENST00000616053 NUPR2A6NF83 97 aa10.04□□□□□ -0.8
TCF4-248ENST00000616053 PSMB8P28062 276 aa10.04□□□□□ -0.8
TCF4-248ENST00000616053 LYL1P12980 280 aa10.03□□□□□ -0.8
TCF4-248ENST00000616053 TMEM75Q8N9X5 138 aa10.03□□□□□ -0.8
TCF4-248ENST00000616053 PRR25Q96S07 402 aa10.03□□□□□ -0.8
TCF4-248ENST00000616053 RTBDNQ9BSG5 229 aaPredicted RBP10.03□□□□□ -0.8
TCF4-248ENST00000616053 RGPD2P0DJD1 1756 aa10.03□□□□□ -0.8
TCF4-248ENST00000616053 FGF16O43320 207 aa10.03□□□□□ -0.8
TCF4-248ENST00000616053 Q86TA4 180 aa10.03□□□□□ -0.8
TCF4-248ENST00000616053 MYCNOSP40205 109 aa10.03□□□□□ -0.8
TCF4-248ENST00000616053 HRCT1Q6UXD1 115 aa10.03□□□□□ -0.8
TCF4-248ENST00000616053 AHDC1Q5TGY3 1603 aaPredicted RBP10.03□□□□□ -0.8
TCF4-248ENST00000616053 NFE4Q86UQ8 179 aa10.03□□□□□ -0.8
TCF4-248ENST00000616053 FOCADQ5VW36 1801 aa10.03□□□□□ -0.8
TCF4-248ENST00000616053 HIST1H2BLQ99880 126 aa10.02□□□□□ -0.8
TCF4-248ENST00000616053 TEX49A0A1B0GTD5 131 aa10.02□□□□□ -0.81
TCF4-248ENST00000616053 TMEM213A2RRL7 107 aa10.02□□□□□ -0.81
TCF4-248ENST00000616053 IGKV1-17P01599 117 aa10.02□□□□□ -0.81
TCF4-248ENST00000616053 RGPD3A6NKT7 1758 aaPredicted RBP10.02□□□□□ -0.81
TCF4-248ENST00000616053 MAST2Q6P0Q8 1798 aa10.02□□□□□ -0.81
TCF4-248ENST00000616053 C4orf51C9J302 202 aa10.02□□□□□ -0.81
TCF4-248ENST00000616053 LOXP28300 417 aaPredicted RBP10.02□□□□□ -0.81
TCF4-248ENST00000616053 INSL3P51460 131 aa10.02□□□□□ -0.81
TCF4-248ENST00000616053 Q8N8P6 123 aa10.02□□□□□ -0.81
TCF4-248ENST00000616053 MPLKIPQ8TAP9 179 aa10.02□□□□□ -0.81
TCF4-248ENST00000616053 LINC01590Q5TEZ4 76 aa10.02□□□□□ -0.81
TCF4-248ENST00000616053 PIN1P1O15428 100 aa10.02□□□□□ -0.81
TCF4-248ENST00000616053 PRO1854Q9UHT4 67 aa10.02□□□□□ -0.81
TCF4-248ENST00000616053 TICRRQ7Z2Z1 1910 aa10.02□□□□□ -0.81
TCF4-248ENST00000616053 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.01□□□□□ -0.81
TCF4-248ENST00000616053 SHISA2Q6UWI4 295 aa10.01□□□□□ -0.81
TCF4-248ENST00000616053 SND1-IT1Q9HBX3 110 aa10.01□□□□□ -0.81
TCF4-248ENST00000616053 LTBP4Q8N2S1 1624 aa10.01□□□□□ -0.81
TCF4-248ENST00000616053 TRAV1-1A0A0B4J248 108 aa10.01□□□□□ -0.81
TCF4-248ENST00000616053 DEFB131BA0A096LNP1 70 aa10.01□□□□□ -0.81
TCF4-248ENST00000616053 YPEL3P61236 119 aaPredicted RBP10.01□□□□□ -0.81
TCF4-248ENST00000616053 FAM110AQ9BQ89 295 aa10.01□□□□□ -0.81
TCF4-248ENST00000616053 IGLV3-19P01714 112 aa10.01□□□□□ -0.81
TCF4-248ENST00000616053 Q6ZVQ6 151 aa10.01□□□□□ -0.81
TCF4-248ENST00000616053 IGLV3-9A0A075B6K5 115 aa10.01□□□□□ -0.81
TCF4-248ENST00000616053 SERP2Q8N6R1 65 aa10.01□□□□□ -0.81
TCF4-248ENST00000616053 TRBV5-3A0A0A0MS03 114 aa10□□□□□ -0.81
TCF4-248ENST00000616053 H3BUA1 57 aa10□□□□□ -0.81
TCF4-248ENST00000616053 SYS1-DBNDD2H3BUS1 97 aa10□□□□□ -0.81
TCF4-248ENST00000616053 RNF152Q8N8N0 203 aa10□□□□□ -0.81
TCF4-248ENST00000616053 IGLV3-12A0A075B6K2 115 aa10□□□□□ -0.81
TCF4-248ENST00000616053 PRSS46E5RG02 174 aa10□□□□□ -0.81
TCF4-248ENST00000616053 MAJINQ3KP22 176 aa10□□□□□ -0.81
TCF4-248ENST00000616053 A0A0J9YWU9 116 aa10□□□□□ -0.81
TCF4-248ENST00000616053 TJP1Q07157 1748 aa10□□□□□ -0.81
TCF4-248ENST00000616053 IGKV1D-8A0A087WSZ0 117 aa10□□□□□ -0.81
TCF4-248ENST00000616053 ZNF706Q9Y5V0 76 aaPredicted RBP10□□□□□ -0.81
TCF4-248ENST00000616053 SONP18583 2426 aaKnown RBP10□□□□□ -0.81
TCF4-248ENST00000616053 WNK3Q9BYP7 1800 aa10□□□□□ -0.81
TCF4-248ENST00000616053 JMJD7-PLA2G4BH0Y9G9 81 aa9.99□□□□□ -0.81
TCF4-248ENST00000616053 J3QQQ9 107 aa9.99□□□□□ -0.81
TCF4-248ENST00000616053 WDR86Q86TI4 376 aa9.99□□□□□ -0.81
TCF4-248ENST00000616053 SBF1O95248 1867 aa9.99□□□□□ -0.81
TCF4-248ENST00000616053 IGKV1D-17A0A075B6S4 117 aa9.99□□□□□ -0.81
TCF4-248ENST00000616053 LAMB2P55268 1798 aa9.99□□□□□ -0.81
TCF4-248ENST00000616053 NRXN3Q9Y4C0 1643 aa9.98□□□□□ -0.81
TCF4-248ENST00000616053 PPDPFLQ8WWR9 84 aa9.98□□□□□ -0.81
TCF4-248ENST00000616053 FRMPD3Q5JV73 1810 aa9.98□□□□□ -0.81
TCF4-248ENST00000616053 IGHV4-30-2A0A087WSY4 118 aa9.98□□□□□ -0.81
TCF4-248ENST00000616053 IGHV4-30-4P0DP06 118 aa9.98□□□□□ -0.81
TCF4-248ENST00000616053 IGHV4-31P0DP07 118 aa9.98□□□□□ -0.81
TCF4-248ENST00000616053 NRGNQ92686 78 aa9.98□□□□□ -0.81
TCF4-248ENST00000616053 NAV3Q8IVL0 2385 aa9.97□□□□□ -0.81
TCF4-248ENST00000616053 CXCL5P42830 114 aa9.97□□□□□ -0.81
TCF4-248ENST00000616053 FGF23Q9GZV9 251 aaPredicted RBP9.97□□□□□ -0.81
TCF4-248ENST00000616053 ADAMTSL3P82987 1691 aa9.97□□□□□ -0.81
TCF4-248ENST00000616053 QSER1Q2KHR3 1735 aa9.97□□□□□ -0.81
TCF4-248ENST00000616053 IGHV2-70P01814 119 aa9.97□□□□□ -0.81
TCF4-248ENST00000616053 PRRC2AP48634 2157 aaKnown RBP9.97□□□□□ -0.81
TCF4-248ENST00000616053 WFDC10BQ8IUB3 73 aa9.97□□□□□ -0.81
TCF4-248ENST00000616053 PATJQ8NI35 1801 aa9.97□□□□□ -0.81
TCF4-248ENST00000616053 ZNRD1Q9P1U0 126 aa9.97□□□□□ -0.81
TCF4-248ENST00000616053 ARFGEF1Q9Y6D6 1849 aa9.97□□□□□ -0.81
TCF4-248ENST00000616053 H0YGX0 51 aa9.96□□□□□ -0.81
TCF4-248ENST00000616053 COX7BP24311 80 aa9.96□□□□□ -0.81
TCF4-248ENST00000616053 DSCAML1Q8TD84 2053 aa9.96□□□□□ -0.81
TCF4-248ENST00000616053 TAX1BP3O14907 124 aa9.96□□□□□ -0.82
TCF4-248ENST00000616053 GFRA4Q9GZZ7 299 aa9.96□□□□□ -0.82
TCF4-248ENST00000616053 INAFM1C9JVW0 142 aa9.96□□□□□ -0.82
TCF4-248ENST00000616053 A0A0G2JRQ6 117 aa9.96□□□□□ -0.82
TCF4-248ENST00000616053 MLANAQ16655 118 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms