RNA–Protein interactions for RNA: ENST00000615631.4

FDFT1-223, Transcript of farnesyl-diphosphate farnesyltransferase 1, human

APPRIS P1 TSL 5 BASIC

Gene FDFT1, Length 2,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDFT1-223	ENST00000615631	FOXA2	Q9Y261	457 aa	Predicted RBP	11.3	□□□□□ -0.6
FDFT1-223	ENST00000615631	LINC00694	P0DN24	101 aa		11.3	□□□□□ -0.6
FDFT1-223	ENST00000615631	GCSH	P23434	173 aa		11.3	□□□□□ -0.6
FDFT1-223	ENST00000615631	FXYD2	P54710	66 aa		11.3	□□□□□ -0.6
FDFT1-223	ENST00000615631	FXYD3	Q14802	87 aa		11.3	□□□□□ -0.6
FDFT1-223	ENST00000615631	AMTN	Q6UX39	209 aa		11.3	□□□□□ -0.6
FDFT1-223	ENST00000615631		Q6ZRM9	215 aa		11.3	□□□□□ -0.6
FDFT1-223	ENST00000615631		Q6ZS46	218 aa		11.3	□□□□□ -0.6
FDFT1-223	ENST00000615631		Q6ZSV7	163 aa		11.3	□□□□□ -0.6
FDFT1-223	ENST00000615631		K7ERJ3	54 aa		11.29	□□□□□ -0.6
FDFT1-223	ENST00000615631	SPANXN5	Q5MJ07	72 aa		11.29	□□□□□ -0.6
FDFT1-223	ENST00000615631		Q6Q795	121 aa		11.29	□□□□□ -0.6
FDFT1-223	ENST00000615631	OR1L8	Q8NGR8	309 aa		11.29	□□□□□ -0.6
FDFT1-223	ENST00000615631	JMJD1C	Q15652	2540 aa		11.29	□□□□□ -0.6
FDFT1-223	ENST00000615631	NDUFA7	O95182	113 aa		11.29	□□□□□ -0.6
FDFT1-223	ENST00000615631	DEFA4	P12838	97 aa		11.29	□□□□□ -0.6
FDFT1-223	ENST00000615631	FAM106A	Q4KMX7	169 aa		11.29	□□□□□ -0.6
FDFT1-223	ENST00000615631	PRIMA1	Q86XR5	153 aa		11.29	□□□□□ -0.6
FDFT1-223	ENST00000615631	PPDPFL	Q8WWR9	84 aa		11.29	□□□□□ -0.6
FDFT1-223	ENST00000615631	SRSF12	Q8WXF0	261 aa	Known RBP	11.29	□□□□□ -0.6
FDFT1-223	ENST00000615631	TET2	Q6N021	2002 aa	Predicted RBP	11.28	□□□□□ -0.6
FDFT1-223	ENST00000615631	LOC107984640	A0A0U1RRK4	108 aa		11.28	□□□□□ -0.6
FDFT1-223	ENST00000615631	TNFRSF6B	O95407	300 aa		11.28	□□□□□ -0.6
FDFT1-223	ENST00000615631	RPL27A	P46776	148 aa	Known RBP	11.28	□□□□□ -0.6
FDFT1-223	ENST00000615631	NDP	Q00604	133 aa		11.28	□□□□□ -0.6
FDFT1-223	ENST00000615631	TMEM116	Q8NCL8	245 aa		11.28	□□□□□ -0.6
FDFT1-223	ENST00000615631	C11orf52	Q96A22	123 aa		11.28	□□□□□ -0.6
FDFT1-223	ENST00000615631	TMEM147	Q9BVK8	224 aa		11.28	□□□□□ -0.6
FDFT1-223	ENST00000615631	RNASE7	Q9H1E1	156 aa	Known RBP	11.28	□□□□□ -0.6
FDFT1-223	ENST00000615631	SETD2	Q9BYW2	2564 aa	Predicted RBP	11.28	□□□□□ -0.6
FDFT1-223	ENST00000615631	ATP6V0E1	O15342	81 aa		11.28	□□□□□ -0.6
FDFT1-223	ENST00000615631	C10orf55	Q5SWW7	151 aa		11.28	□□□□□ -0.6
FDFT1-223	ENST00000615631	MRPL32	Q9BYC8	188 aa	Known RBP	11.28	□□□□□ -0.6
FDFT1-223	ENST00000615631	C16orf95	Q9H693	158 aa		11.28	□□□□□ -0.6
FDFT1-223	ENST00000615631	MDFIC	Q9P1T7	246 aa		11.28	□□□□□ -0.6
FDFT1-223	ENST00000615631	ZNF580	Q9UK33	172 aa		11.28	□□□□□ -0.6
FDFT1-223	ENST00000615631	NF1	P21359	2839 aa		11.28	□□□□□ -0.6
FDFT1-223	ENST00000615631		J3KT08	172 aa		11.27	□□□□□ -0.61
FDFT1-223	ENST00000615631	SNCG	O76070	127 aa		11.27	□□□□□ -0.61
FDFT1-223	ENST00000615631	IGF1	P05019	195 aa		11.27	□□□□□ -0.61
FDFT1-223	ENST00000615631	MYOD1	P15172	320 aa		11.27	□□□□□ -0.61
FDFT1-223	ENST00000615631	RASL10A	Q92737	203 aa		11.27	□□□□□ -0.61
FDFT1-223	ENST00000615631	NPCDR1	Q9BY65	106 aa		11.27	□□□□□ -0.61
FDFT1-223	ENST00000615631	C2CD3	Q4AC94	2353 aa		11.27	□□□□□ -0.61
FDFT1-223	ENST00000615631	LINC01548	A6NM66	108 aa		11.27	□□□□□ -0.61
FDFT1-223	ENST00000615631	CSN1S1	P47710	185 aa		11.27	□□□□□ -0.61
FDFT1-223	ENST00000615631	HSPE1	P61604	102 aa	Known RBP	11.27	□□□□□ -0.61
FDFT1-223	ENST00000615631	NHP2	Q9NX24	153 aa	Known RBP	11.27	□□□□□ -0.61
FDFT1-223	ENST00000615631	NDUFA4L2	Q9NRX3	87 aa		11.26	□□□□□ -0.61
FDFT1-223	ENST00000615631		E7EUB6	86 aa		11.26	□□□□□ -0.61
FDFT1-223	ENST00000615631	ZNF688	P0C7X2	276 aa		11.26	□□□□□ -0.61
FDFT1-223	ENST00000615631	CRIP2	P52943	208 aa	Predicted RBP	11.26	□□□□□ -0.61
FDFT1-223	ENST00000615631	MFAP2	P55001	183 aa		11.26	□□□□□ -0.61
FDFT1-223	ENST00000615631	PRCD	Q00LT1	54 aa		11.26	□□□□□ -0.61
FDFT1-223	ENST00000615631	GDF5OS	Q5U4N7	250 aa		11.26	□□□□□ -0.61
FDFT1-223	ENST00000615631	CFAP126	Q5VTH2	177 aa		11.26	□□□□□ -0.61
FDFT1-223	ENST00000615631	KIR2DL5B	Q8NHK3	375 aa		11.26	□□□□□ -0.61
FDFT1-223	ENST00000615631		C9JAW5	83 aa		11.25	□□□□□ -0.61
FDFT1-223	ENST00000615631	EGR2	P11161	476 aa	Predicted RBP	11.25	□□□□□ -0.61
FDFT1-223	ENST00000615631	TMEM14EP	Q6UXP3	125 aa		11.25	□□□□□ -0.61
FDFT1-223	ENST00000615631	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	11.25	□□□□□ -0.61
FDFT1-223	ENST00000615631	SGK494	Q96LW2	274 aa		11.25	□□□□□ -0.61
FDFT1-223	ENST00000615631	LINC01587	Q99440	93 aa		11.25	□□□□□ -0.61
FDFT1-223	ENST00000615631	HIGD1A	Q9Y241	93 aa		11.25	□□□□□ -0.61
FDFT1-223	ENST00000615631	TRAV41	A0A0B4J266	112 aa		11.25	□□□□□ -0.61
FDFT1-223	ENST00000615631	CGB1	A6NKQ9	187 aa		11.25	□□□□□ -0.61
FDFT1-223	ENST00000615631	ECSCR	Q19T08	205 aa		11.25	□□□□□ -0.61
FDFT1-223	ENST00000615631	CENPW	Q5EE01	88 aa		11.25	□□□□□ -0.61
FDFT1-223	ENST00000615631	LINC01006	Q8NI28	216 aa		11.25	□□□□□ -0.61
FDFT1-223	ENST00000615631	PLEKHA3	Q9HB20	300 aa		11.25	□□□□□ -0.61
FDFT1-223	ENST00000615631	TEX22	C9J3V5	150 aa		11.24	□□□□□ -0.61
FDFT1-223	ENST00000615631	HIGD1B	Q9P298	99 aa		11.24	□□□□□ -0.61
FDFT1-223	ENST00000615631	LINC00527	Q9UJ94	153 aa		11.24	□□□□□ -0.61
FDFT1-223	ENST00000615631	ARL14EPL	P0DKL9	152 aa		11.24	□□□□□ -0.61
FDFT1-223	ENST00000615631	TMEM101	Q96IK0	257 aa		11.24	□□□□□ -0.61
FDFT1-223	ENST00000615631	ASCL2	Q99929	193 aa		11.24	□□□□□ -0.61
FDFT1-223	ENST00000615631		G3V318	75 aa		11.23	□□□□□ -0.61
FDFT1-223	ENST00000615631	CHEK1	O14757	476 aa		11.23	□□□□□ -0.61
FDFT1-223	ENST00000615631	APELA	P0DMC3	54 aa		11.23	□□□□□ -0.61
FDFT1-223	ENST00000615631	SMCP	P49901	116 aa	Predicted RBP	11.23	□□□□□ -0.61
FDFT1-223	ENST00000615631	CARD19	Q96LW7	228 aa		11.23	□□□□□ -0.61
FDFT1-223	ENST00000615631	YTHDF2	Q9Y5A9	579 aa	Known RBP	11.23	□□□□□ -0.61
FDFT1-223	ENST00000615631	F11R	Q9Y624	299 aa	Known RBP	11.23	□□□□□ -0.61
FDFT1-223	ENST00000615631		A0A1B0GX51	115 aa		11.23	□□□□□ -0.61
FDFT1-223	ENST00000615631	CLPSL1	A2RUU4	121 aa		11.23	□□□□□ -0.61
FDFT1-223	ENST00000615631	AREG	P15514	252 aa		11.23	□□□□□ -0.61
FDFT1-223	ENST00000615631	KRTAP24-1	Q3LI83	254 aa		11.23	□□□□□ -0.61
FDFT1-223	ENST00000615631	C19orf54	Q5BKX5	351 aa		11.23	□□□□□ -0.61
FDFT1-223	ENST00000615631	SPINK9	Q5DT21	86 aa		11.23	□□□□□ -0.61
FDFT1-223	ENST00000615631	ASPHD1	Q5U4P2	390 aa		11.23	□□□□□ -0.61
FDFT1-223	ENST00000615631	TRAV4	A0A0B4J268	109 aa		11.22	□□□□□ -0.61
FDFT1-223	ENST00000615631	PQLC2	Q6ZP29	291 aa		11.22	□□□□□ -0.61
FDFT1-223	ENST00000615631	OR10J6P	Q8NGY7	276 aa		11.22	□□□□□ -0.61
FDFT1-223	ENST00000615631	TCRBV4S1A1T	A0A5B7	111 aa		11.21	□□□□□ -0.61
FDFT1-223	ENST00000615631	INS-IGF2	F8WCM5	200 aa		11.21	□□□□□ -0.61
FDFT1-223	ENST00000615631	WT1-AS	Q06250	92 aa		11.21	□□□□□ -0.61
FDFT1-223	ENST00000615631	TEN1	Q86WV5	123 aa		11.21	□□□□□ -0.61
FDFT1-223	ENST00000615631		A8MWL6	223 aa		11.21	□□□□□ -0.61
FDFT1-223	ENST00000615631	EMP1	P54849	157 aa		11.21	□□□□□ -0.61
FDFT1-223	ENST00000615631	ERH	P84090	104 aa	Known RBP	11.21	□□□□□ -0.61

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