RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 TMED6Q8WW62 240 aa8.4□□□□□ -1.06
PDLIM2-218ENST00000614502 PRO0255Q9UI72 69 aa8.4□□□□□ -1.06
PDLIM2-218ENST00000614502 LENEPQ9Y5L5 61 aa8.4□□□□□ -1.06
PDLIM2-218ENST00000614502 MAP1LC3B2A6NCE7 125 aa8.39□□□□□ -1.07
PDLIM2-218ENST00000614502 FHITP49789 147 aa8.39□□□□□ -1.07
PDLIM2-218ENST00000614502 SUMO1P63165 101 aaKnown RBP8.39□□□□□ -1.07
PDLIM2-218ENST00000614502 C5orf17Q8NAS9 161 aa8.39□□□□□ -1.07
PDLIM2-218ENST00000614502 Q8TAT8 98 aa8.39□□□□□ -1.07
PDLIM2-218ENST00000614502 MBD3L1Q8WWY6 194 aa8.39□□□□□ -1.07
PDLIM2-218ENST00000614502 VSIG2Q96IQ7 327 aa8.39□□□□□ -1.07
PDLIM2-218ENST00000614502 MAP1LC3BQ9GZQ8 125 aa8.39□□□□□ -1.07
PDLIM2-218ENST00000614502 KLF12Q9Y4X4 402 aa8.39□□□□□ -1.07
PDLIM2-218ENST00000614502 SERTM2A0A1B0GWG4 89 aa8.38□□□□□ -1.07
PDLIM2-218ENST00000614502 GGTLC3B5MD39 225 aa8.38□□□□□ -1.07
PDLIM2-218ENST00000614502 SIVA1O15304 175 aa8.38□□□□□ -1.07
PDLIM2-218ENST00000614502 TCRAP04437 139 aa8.38□□□□□ -1.07
PDLIM2-218ENST00000614502 FGF8P55075 233 aaPredicted RBP8.38□□□□□ -1.07
PDLIM2-218ENST00000614502 GNG5P63218 68 aa8.38□□□□□ -1.07
PDLIM2-218ENST00000614502 MRPL23Q16540 153 aaKnown RBP8.38□□□□□ -1.07
PDLIM2-218ENST00000614502 PRR9Q5T870 116 aa8.38□□□□□ -1.07
PDLIM2-218ENST00000614502 DPPA3Q6W0C5 159 aa8.38□□□□□ -1.07
PDLIM2-218ENST00000614502 GOLT1AQ6ZVE7 132 aa8.38□□□□□ -1.07
PDLIM2-218ENST00000614502 IQCF2Q8IXL9 164 aa8.38□□□□□ -1.07
PDLIM2-218ENST00000614502 SPXQ9BT56 116 aa8.38□□□□□ -1.07
PDLIM2-218ENST00000614502 EPDR1Q9UM22 224 aa8.38□□□□□ -1.07
PDLIM2-218ENST00000614502 RPH3ALQ9UNE2 315 aa8.38□□□□□ -1.07
PDLIM2-218ENST00000614502 TRGV11A0A075B6L2 103 aa8.37□□□□□ -1.07
PDLIM2-218ENST00000614502 FAM74A7A6NL05 159 aa8.37□□□□□ -1.07
PDLIM2-218ENST00000614502 SPATA12Q7Z6I5 190 aa8.37□□□□□ -1.07
PDLIM2-218ENST00000614502 SLC51BQ86UW2 128 aa8.37□□□□□ -1.07
PDLIM2-218ENST00000614502 C9orf62Q8N4C0 152 aa8.37□□□□□ -1.07
PDLIM2-218ENST00000614502 FAM213BQ8TBF2 198 aa8.37□□□□□ -1.07
PDLIM2-218ENST00000614502 HHLA3Q9XRX5 114 aa8.37□□□□□ -1.07
PDLIM2-218ENST00000614502 TRAV9-2A0A087WT02 112 aa8.36□□□□□ -1.07
PDLIM2-218ENST00000614502 TRAV8-1A0A0A6YYK1 113 aa8.36□□□□□ -1.07
PDLIM2-218ENST00000614502 TRGV4A0A0C4DH28 118 aa8.36□□□□□ -1.07
PDLIM2-218ENST00000614502 EREGO14944 169 aa8.36□□□□□ -1.07
PDLIM2-218ENST00000614502 UBE2G2P60604 165 aa8.36□□□□□ -1.07
PDLIM2-218ENST00000614502 ZFP69Q49AA0 526 aa8.36□□□□□ -1.07
PDLIM2-218ENST00000614502 Q6AWC8 147 aa8.36□□□□□ -1.07
PDLIM2-218ENST00000614502 EIF5AL1Q6IS14 154 aaKnown RBP8.36□□□□□ -1.07
PDLIM2-218ENST00000614502 FAM159AQ6UWV7 190 aa8.36□□□□□ -1.07
PDLIM2-218ENST00000614502 MAPKAPK5-AS1Q8N8E1 139 aa8.36□□□□□ -1.07
PDLIM2-218ENST00000614502 SFT2D1Q8WV19 159 aa8.36□□□□□ -1.07
PDLIM2-218ENST00000614502 PCNPQ8WW12 178 aaKnown RBP8.36□□□□□ -1.07
PDLIM2-218ENST00000614502 NKX6-2Q9C056 277 aaPredicted RBP8.36□□□□□ -1.07
PDLIM2-218ENST00000614502 MRPL16Q9NX20 251 aaKnown RBP8.36□□□□□ -1.07
PDLIM2-218ENST00000614502 TP53TG3Q9ULZ0 132 aa8.36□□□□□ -1.07
PDLIM2-218ENST00000614502 DNAH5Q8TE73 4624 aa8.35□□□□□ -1.07
PDLIM2-218ENST00000614502 K7EP13 123 aa8.35□□□□□ -1.07
PDLIM2-218ENST00000614502 K7EQM0 130 aa8.35□□□□□ -1.07
PDLIM2-218ENST00000614502 IGLV2-11P01706 119 aa8.35□□□□□ -1.07
PDLIM2-218ENST00000614502 IGHV3-53P01767 116 aa8.35□□□□□ -1.07
PDLIM2-218ENST00000614502 H2AFB1P0C5Y9 115 aa8.35□□□□□ -1.07
PDLIM2-218ENST00000614502 RAB5CP51148 216 aa8.35□□□□□ -1.07
PDLIM2-218ENST00000614502 CRYBA4P53673 196 aa8.35□□□□□ -1.07
PDLIM2-218ENST00000614502 Q6ZQT7 251 aa8.35□□□□□ -1.07
PDLIM2-218ENST00000614502 NEGR1Q7Z3B1 354 aa8.35□□□□□ -1.07
PDLIM2-218ENST00000614502 NFE4Q86UQ8 179 aa8.35□□□□□ -1.07
PDLIM2-218ENST00000614502 CYB561D1Q8N8Q1 229 aa8.35□□□□□ -1.07
PDLIM2-218ENST00000614502 TVP23CQ96ET8 276 aa8.35□□□□□ -1.07
PDLIM2-218ENST00000614502 KRTAP1-5Q9BYS1 174 aa8.35□□□□□ -1.07
PDLIM2-218ENST00000614502 ARL2-SNX15V9GYD0 113 aa8.35□□□□□ -1.07
PDLIM2-218ENST00000614502 FBLL1A6NHQ2 334 aaKnown RBP8.34□□□□□ -1.07
PDLIM2-218ENST00000614502 NXPH4O95158 308 aa8.34□□□□□ -1.07
PDLIM2-218ENST00000614502 ORM1P02763 201 aa8.34□□□□□ -1.07
PDLIM2-218ENST00000614502 SULT1A2P50226 295 aa8.34□□□□□ -1.07
PDLIM2-218ENST00000614502 LINC00315P59091 139 aa8.34□□□□□ -1.07
PDLIM2-218ENST00000614502 FLI1Q01543 452 aaPredicted RBP8.34□□□□□ -1.07
PDLIM2-218ENST00000614502 MUC21Q5SSG8 566 aa8.34□□□□□ -1.07
PDLIM2-218ENST00000614502 TMEM75Q8N9X5 138 aa8.34□□□□□ -1.07
PDLIM2-218ENST00000614502 RASL10AQ92737 203 aa8.34□□□□□ -1.07
PDLIM2-218ENST00000614502 SGK494Q96LW2 274 aa8.34□□□□□ -1.07
PDLIM2-218ENST00000614502 PSG8Q9UQ74 426 aa8.34□□□□□ -1.07
PDLIM2-218ENST00000614502 TRAV1-1A0A0B4J248 108 aa8.33□□□□□ -1.08
PDLIM2-218ENST00000614502 IFNA7P01567 189 aa8.33□□□□□ -1.08
PDLIM2-218ENST00000614502 SRIP30626 198 aa8.33□□□□□ -1.08
PDLIM2-218ENST00000614502 FHL2Q14192 279 aa8.33□□□□□ -1.08
PDLIM2-218ENST00000614502 TMEM183BQ1AE95 376 aa8.33□□□□□ -1.08
PDLIM2-218ENST00000614502 TMEM183AQ8IXX5 376 aa8.33□□□□□ -1.08
PDLIM2-218ENST00000614502 HIST1H2BAQ96A08 127 aa8.33□□□□□ -1.08
PDLIM2-218ENST00000614502 C8orf49Q96NF6 230 aa8.33□□□□□ -1.08
PDLIM2-218ENST00000614502 TREM1Q9NP99 234 aa8.33□□□□□ -1.08
PDLIM2-218ENST00000614502 PGPEP1Q9NXJ5 209 aa8.33□□□□□ -1.08
PDLIM2-218ENST00000614502 BOLA1Q9Y3E2 137 aa8.33□□□□□ -1.08
PDLIM2-218ENST00000614502 TRAV21A0A0B4J279 112 aa8.32□□□□□ -1.08
PDLIM2-218ENST00000614502 C9JCJ5 164 aa8.32□□□□□ -1.08
PDLIM2-218ENST00000614502 PEX7O00628 323 aa8.32□□□□□ -1.08
PDLIM2-218ENST00000614502 PAGE4O60829 102 aa8.32□□□□□ -1.08
PDLIM2-218ENST00000614502 ERVFC1-1P60608 527 aa8.32□□□□□ -1.08
PDLIM2-218ENST00000614502 TDRG1Q3Y452 100 aa8.32□□□□□ -1.08
PDLIM2-218ENST00000614502 LYPD5Q6UWN5 251 aa8.32□□□□□ -1.08
PDLIM2-218ENST00000614502 SH2D6Q7Z4S9 175 aa8.32□□□□□ -1.08
PDLIM2-218ENST00000614502 KCNS1Q96KK3 526 aa8.32□□□□□ -1.08
PDLIM2-218ENST00000614502 LINC00479Q96M42 142 aa8.32□□□□□ -1.08
PDLIM2-218ENST00000614502 TXNDC17Q9BRA2 123 aa8.32□□□□□ -1.08
PDLIM2-218ENST00000614502 TCEAL7Q9BRU2 100 aa8.32□□□□□ -1.08
PDLIM2-218ENST00000614502 NDFIP1Q9BT67 221 aa8.32□□□□□ -1.08
PDLIM2-218ENST00000614502 LY96Q9Y6Y9 160 aa8.32□□□□□ -1.08
PDLIM2-218ENST00000614502 TRAV4A0A0B4J268 109 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms