RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 A0A096LNJ9 63 aa7.72□□□□□ -1.17
GGA3-221ENST00000614198 TRBV7-9A0A0J9YWB2 115 aa7.72□□□□□ -1.17
GGA3-221ENST00000614198 H3BUX3 64 aa7.72□□□□□ -1.17
GGA3-221ENST00000614198 K7ERJ3 54 aa7.72□□□□□ -1.17
GGA3-221ENST00000614198 SPINK8P0C7L1 97 aa7.72□□□□□ -1.17
GGA3-221ENST00000614198 C2orf83Q53S99 150 aa7.72□□□□□ -1.17
GGA3-221ENST00000614198 TTTY13Q9BZ97 58 aa7.72□□□□□ -1.17
GGA3-221ENST00000614198 NHP2Q9NX24 153 aaKnown RBP7.72□□□□□ -1.17
GGA3-221ENST00000614198 HIGD1BQ9P298 99 aa7.72□□□□□ -1.17
GGA3-221ENST00000614198 A0A1B0GUT8 65 aa7.72□□□□□ -1.17
GGA3-221ENST00000614198 NPIPB6E9PJ23 425 aa7.72□□□□□ -1.17
GGA3-221ENST00000614198 E9PLD3 99 aa7.72□□□□□ -1.17
GGA3-221ENST00000614198 EGR2P11161 476 aaPredicted RBP7.72□□□□□ -1.17
GGA3-221ENST00000614198 SUB1P53999 127 aaKnown RBP eCLIP7.72□□□□□ -1.17
GGA3-221ENST00000614198 FXYD2P54710 66 aa7.72□□□□□ -1.17
GGA3-221ENST00000614198 EXOC3-AS1Q8N2X6 119 aa7.72□□□□□ -1.17
GGA3-221ENST00000614198 UFC1Q9Y3C8 167 aa7.72□□□□□ -1.17
GGA3-221ENST00000614198 LTAP01374 205 aa7.72□□□□□ -1.17
GGA3-221ENST00000614198 PRSS1P07477 247 aa7.72□□□□□ -1.17
GGA3-221ENST00000614198 FAM106CPP0CH98 169 aa7.72□□□□□ -1.17
GGA3-221ENST00000614198 CT45A10P0DMU9 189 aa7.72□□□□□ -1.17
GGA3-221ENST00000614198 RIGQ13278 110 aa7.72□□□□□ -1.17
GGA3-221ENST00000614198 ECSCRQ19T08 205 aa7.72□□□□□ -1.17
GGA3-221ENST00000614198 FAM106AQ4KMX7 169 aa7.72□□□□□ -1.17
GGA3-221ENST00000614198 AMTNQ6UX39 209 aa7.72□□□□□ -1.17
GGA3-221ENST00000614198 Q71RC1 249 aaPredicted RBP7.72□□□□□ -1.17
GGA3-221ENST00000614198 Q8N6K4 173 aa7.72□□□□□ -1.17
GGA3-221ENST00000614198 GATD1Q8NB37 220 aa7.72□□□□□ -1.17
GGA3-221ENST00000614198 ZNF414Q96IQ9 312 aa7.72□□□□□ -1.17
GGA3-221ENST00000614198 ANAPC13Q9BS18 74 aa7.72□□□□□ -1.17
GGA3-221ENST00000614198 Q9H3A6 140 aa7.72□□□□□ -1.17
GGA3-221ENST00000614198 IGHV7-81A0A0B4J1V7 117 aa7.71□□□□□ -1.17
GGA3-221ENST00000614198 OR11H12B2RN74 326 aa7.71□□□□□ -1.17
GGA3-221ENST00000614198 ARL3P36405 182 aa7.71□□□□□ -1.17
GGA3-221ENST00000614198 OR11H1Q8NG94 326 aa7.71□□□□□ -1.17
GGA3-221ENST00000614198 OR11H2Q8NH07 326 aa7.71□□□□□ -1.17
GGA3-221ENST00000614198 ZNF418Q8TF45 676 aaPredicted RBP7.71□□□□□ -1.17
GGA3-221ENST00000614198 FMC1Q96HJ9 113 aa7.71□□□□□ -1.17
GGA3-221ENST00000614198 IGHV4-59P01825 116 aa7.71□□□□□ -1.18
GGA3-221ENST00000614198 DEFB112Q30KQ8 113 aa7.71□□□□□ -1.18
GGA3-221ENST00000614198 PATE2Q6UY27 113 aa7.71□□□□□ -1.18
GGA3-221ENST00000614198 LINC01356Q8N9X3 169 aa7.71□□□□□ -1.18
GGA3-221ENST00000614198 C20orf78Q9BR46 151 aa7.71□□□□□ -1.18
GGA3-221ENST00000614198 PGPEP1Q9NXJ5 209 aa7.71□□□□□ -1.18
GGA3-221ENST00000614198 TCRBV4S1A1TA0A5B7 111 aa7.71□□□□□ -1.18
GGA3-221ENST00000614198 LOXL1Q08397 574 aaPredicted RBP7.71□□□□□ -1.18
GGA3-221ENST00000614198 ZNF502Q8TBZ5 544 aa7.71□□□□□ -1.18
GGA3-221ENST00000614198 BAHCC1Q9P281 2608 aa7.7□□□□□ -1.18
GGA3-221ENST00000614198 ATP6V0E1O15342 81 aa7.7□□□□□ -1.18
GGA3-221ENST00000614198 NDUFA3O95167 84 aa7.7□□□□□ -1.18
GGA3-221ENST00000614198 PSMG4Q5JS54 123 aa7.7□□□□□ -1.18
GGA3-221ENST00000614198 MINOS1Q5TGZ0 78 aa7.7□□□□□ -1.18
GGA3-221ENST00000614198 TTC9CQ8N5M4 171 aa7.7□□□□□ -1.18
GGA3-221ENST00000614198 NPBQ8NG41 125 aa7.7□□□□□ -1.18
GGA3-221ENST00000614198 MINOS1-NBL1R4GNA1 71 aa7.7□□□□□ -1.18
GGA3-221ENST00000614198 D6R8Y8 96 aa7.7□□□□□ -1.18
GGA3-221ENST00000614198 SMKR1H3BMG3 65 aa7.7□□□□□ -1.18
GGA3-221ENST00000614198 SLC25A16P16260 332 aa7.7□□□□□ -1.18
GGA3-221ENST00000614198 TENM1Q9UKZ4 2725 aa7.7□□□□□ -1.18
GGA3-221ENST00000614198 IGKV1D-37A0A075B6S9 117 aa7.69□□□□□ -1.18
GGA3-221ENST00000614198 H3BMG7 143 aa7.69□□□□□ -1.18
GGA3-221ENST00000614198 TCRAP04437 139 aa7.69□□□□□ -1.18
GGA3-221ENST00000614198 SFTA2Q6UW10 78 aa7.69□□□□□ -1.18
GGA3-221ENST00000614198 C10orf99Q6UWK7 81 aa7.69□□□□□ -1.18
GGA3-221ENST00000614198 TM2D2Q9BX73 214 aa7.69□□□□□ -1.18
GGA3-221ENST00000614198 IGLL5B9A064 214 aa7.69□□□□□ -1.18
GGA3-221ENST00000614198 C8orf86Q6ZUL3 223 aa7.69□□□□□ -1.18
GGA3-221ENST00000614198 PRELID3AQ96N28 172 aa7.69□□□□□ -1.18
GGA3-221ENST00000614198 BEX4Q9NWD9 120 aaPredicted RBP7.69□□□□□ -1.18
GGA3-221ENST00000614198 FN1P02751 2386 aaKnown RBP7.69□□□□□ -1.18
GGA3-221ENST00000614198 BRI3O95415 125 aa7.69□□□□□ -1.18
GGA3-221ENST00000614198 MT-ATP8P03928 68 aa7.69□□□□□ -1.18
GGA3-221ENST00000614198 CHAC1Q9BUX1 264 aa7.69□□□□□ -1.18
GGA3-221ENST00000614198 PRO0461Q9UI25 63 aa7.69□□□□□ -1.18
GGA3-221ENST00000614198 GAGE13Q4V321 117 aa7.68□□□□□ -1.18
GGA3-221ENST00000614198 AMN1Q8IY45 258 aa7.68□□□□□ -1.18
GGA3-221ENST00000614198 CYSLTR1Q9Y271 337 aa7.68□□□□□ -1.18
GGA3-221ENST00000614198 NSD1Q96L73 2696 aaPredicted RBP7.68□□□□□ -1.18
GGA3-221ENST00000614198 JMJD1CQ15652 2540 aa7.68□□□□□ -1.18
GGA3-221ENST00000614198 CKS2P33552 79 aa7.68□□□□□ -1.18
GGA3-221ENST00000614198 SYT8Q8NBV8 401 aa7.68□□□□□ -1.18
GGA3-221ENST00000614198 IFI27L1Q96BM0 104 aa7.68□□□□□ -1.18
GGA3-221ENST00000614198 DSCR9P59020 149 aa7.68□□□□□ -1.18
GGA3-221ENST00000614198 EBI3Q14213 229 aa7.68□□□□□ -1.18
GGA3-221ENST00000614198 C3orf56Q8N813 242 aa7.68□□□□□ -1.18
GGA3-221ENST00000614198 C5orf56Q8N8D9 126 aa7.68□□□□□ -1.18
GGA3-221ENST00000614198 FANCD2OSQ96PS1 177 aa7.68□□□□□ -1.18
GGA3-221ENST00000614198 RASL11BQ9BPW5 248 aa7.68□□□□□ -1.18
GGA3-221ENST00000614198 DKK2Q9UBU2 259 aa7.68□□□□□ -1.18
GGA3-221ENST00000614198 VWFP04275 2813 aa7.67□□□□□ -1.18
GGA3-221ENST00000614198 A0A1B0GWB2 263 aa7.67□□□□□ -1.18
GGA3-221ENST00000614198 TMEM213A2RRL7 107 aa7.67□□□□□ -1.18
GGA3-221ENST00000614198 HBDP02042 147 aa7.67□□□□□ -1.18
GGA3-221ENST00000614198 SRSF2Q01130 221 aaKnown RBP7.67□□□□□ -1.18
GGA3-221ENST00000614198 ZNF562Q6V9R5 426 aa7.67□□□□□ -1.18
GGA3-221ENST00000614198 CEND1Q8N111 149 aa7.67□□□□□ -1.18
GGA3-221ENST00000614198 CDIP1Q9H305 208 aa7.67□□□□□ -1.18
GGA3-221ENST00000614198 ERG28Q9UKR5 140 aa7.67□□□□□ -1.18
GGA3-221ENST00000614198 K7EIM0 57 aa7.66□□□□□ -1.18
GGA3-221ENST00000614198 GTSCR1Q86UQ5 136 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms