RNA–Protein interactions for RNA: ENST00000613421.4

GGA3-220, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 5,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-220ENST00000613421 LENEPQ9Y5L5 61 aa10.78□□□□□ -0.68
GGA3-220ENST00000613421 ANKHD1Q8IWZ3 2542 aaKnown RBP10.78□□□□□ -0.68
GGA3-220ENST00000613421 C20orf78Q9BR46 151 aa10.77□□□□□ -0.68
GGA3-220ENST00000613421 F8VRH5 84 aa10.77□□□□□ -0.69
GGA3-220ENST00000613421 CRPP02741 224 aa10.77□□□□□ -0.69
GGA3-220ENST00000613421 CGB3P0DN86 165 aa10.77□□□□□ -0.69
GGA3-220ENST00000613421 CGB7P0DN87 165 aa10.77□□□□□ -0.69
GGA3-220ENST00000613421 HLA-DRB4P13762 266 aa10.77□□□□□ -0.69
GGA3-220ENST00000613421 GAGE1Q13065 139 aa10.77□□□□□ -0.69
GGA3-220ENST00000613421 HLA-DRB4X5D2U9 266 aa10.77□□□□□ -0.69
GGA3-220ENST00000613421 F6UB75 175 aa10.77□□□□□ -0.69
GGA3-220ENST00000613421 PTPRSQ13332 1948 aa10.77□□□□□ -0.69
GGA3-220ENST00000613421 C9orf118A6NHY6 69 aa10.76□□□□□ -0.69
GGA3-220ENST00000613421 IGHV4-61A0A0C4DH41 118 aa10.76□□□□□ -0.69
GGA3-220ENST00000613421 DKK2Q9UBU2 259 aa10.76□□□□□ -0.69
GGA3-220ENST00000613421 CKS1BP61024 79 aa10.76□□□□□ -0.69
GGA3-220ENST00000613421 Q8N9W7 124 aa10.76□□□□□ -0.69
GGA3-220ENST00000613421 KLF12Q9Y4X4 402 aa10.76□□□□□ -0.69
GGA3-220ENST00000613421 Q8N7P7 452 aa10.76□□□□□ -0.69
GGA3-220ENST00000613421 C11orf68Q9H3H3 251 aaKnown RBP10.76□□□□□ -0.69
GGA3-220ENST00000613421 Q8NA96 180 aa10.75□□□□□ -0.69
GGA3-220ENST00000613421 WI2-2373I1.2A0A1W2PRP0 233 aa10.75□□□□□ -0.69
GGA3-220ENST00000613421 DEFB112Q30KQ8 113 aa10.75□□□□□ -0.69
GGA3-220ENST00000613421 BVES-AS1Q5T3Y7 98 aa10.75□□□□□ -0.69
GGA3-220ENST00000613421 PRIMA1Q86XR5 153 aa10.75□□□□□ -0.69
GGA3-220ENST00000613421 ATRXP46100 2492 aa10.75□□□□□ -0.69
GGA3-220ENST00000613421 IGHV3-16A0A0C4DH30 117 aa10.75□□□□□ -0.69
GGA3-220ENST00000613421 CRYGCP07315 174 aa10.75□□□□□ -0.69
GGA3-220ENST00000613421 CEP192Q8TEP8 1941 aa10.75□□□□□ -0.69
GGA3-220ENST00000613421 ARHGAP21Q5T5U3 1957 aa10.75□□□□□ -0.69
GGA3-220ENST00000613421 IGHV4-59P01825 116 aa10.75□□□□□ -0.69
GGA3-220ENST00000613421 ADAMTSL5Q6ZMM2 481 aa10.75□□□□□ -0.69
GGA3-220ENST00000613421 LINC00574Q9H8X3 128 aa10.75□□□□□ -0.69
GGA3-220ENST00000613421 ATP6V0BQ99437 205 aa10.74□□□□□ -0.69
GGA3-220ENST00000613421 GTSF1Q8WW33 167 aa10.74□□□□□ -0.69
GGA3-220ENST00000613421 RNF114Q9Y508 228 aa10.74□□□□□ -0.69
GGA3-220ENST00000613421 PAX4O43316 350 aa10.74□□□□□ -0.69
GGA3-220ENST00000613421 SLC25A20O43772 301 aa10.74□□□□□ -0.69
GGA3-220ENST00000613421 DYSFO75923 2080 aa10.74□□□□□ -0.69
GGA3-220ENST00000613421 FAM208BQ5VWN6 2430 aa10.74□□□□□ -0.69
GGA3-220ENST00000613421 GNRH2O43555 120 aa10.74□□□□□ -0.69
GGA3-220ENST00000613421 BUB3O43684 328 aa10.74□□□□□ -0.69
GGA3-220ENST00000613421 IGHV4-38-2P0DP08 117 aa10.73□□□□□ -0.69
GGA3-220ENST00000613421 DEFB130BP0DP73 79 aa10.73□□□□□ -0.69
GGA3-220ENST00000613421 DEFB130AP0DP74 79 aa10.73□□□□□ -0.69
GGA3-220ENST00000613421 EIF4EBP1Q13541 118 aaPredicted RBP10.73□□□□□ -0.69
GGA3-220ENST00000613421 UTF1Q5T230 341 aa10.73□□□□□ -0.69
GGA3-220ENST00000613421 FBXL19-AS1Q494R0 122 aa10.73□□□□□ -0.69
GGA3-220ENST00000613421 VPREB3Q9UKI3 123 aa10.73□□□□□ -0.69
GGA3-220ENST00000613421 PRR14LQ5THK1 2151 aa10.73□□□□□ -0.69
GGA3-220ENST00000613421 SRSF2Q01130 221 aaKnown RBP10.73□□□□□ -0.69
GGA3-220ENST00000613421 CST9LQ9H4G1 147 aa10.73□□□□□ -0.69
GGA3-220ENST00000613421 GAGE12JA6NER3 117 aa10.72□□□□□ -0.69
GGA3-220ENST00000613421 SIVA1O15304 175 aa10.72□□□□□ -0.69
GGA3-220ENST00000613421 AZU1P20160 251 aa10.72□□□□□ -0.69
GGA3-220ENST00000613421 GAGE4Q13068 117 aa10.72□□□□□ -0.69
GGA3-220ENST00000613421 GAGE5Q13069 117 aa10.72□□□□□ -0.69
GGA3-220ENST00000613421 C2orf82Q6UX34 121 aa10.72□□□□□ -0.69
GGA3-220ENST00000613421 ZNF493Q6ZR52 646 aa10.72□□□□□ -0.69
GGA3-220ENST00000613421 ZNF503Q96F45 646 aa10.72□□□□□ -0.69
GGA3-220ENST00000613421 ZFP36P26651 326 aaKnown RBP10.72□□□□□ -0.69
GGA3-220ENST00000613421 OCIAD2Q56VL3 154 aa10.72□□□□□ -0.69
GGA3-220ENST00000613421 C6orf226Q5I0X4 101 aa10.72□□□□□ -0.69
GGA3-220ENST00000613421 GHRHP01286 108 aa10.72□□□□□ -0.69
GGA3-220ENST00000613421 GATA1P15976 413 aaPredicted RBP10.72□□□□□ -0.69
GGA3-220ENST00000613421 PLA2G5P39877 138 aa10.72□□□□□ -0.69
GGA3-220ENST00000613421 IGHV4-30-2A0A087WSY4 118 aa10.72□□□□□ -0.69
GGA3-220ENST00000613421 LEPROTO15243 131 aa10.72□□□□□ -0.69
GGA3-220ENST00000613421 FOXI2Q6ZQN5 318 aa10.72□□□□□ -0.69
GGA3-220ENST00000613421 DPH3Q96FX2 82 aa10.72□□□□□ -0.69
GGA3-220ENST00000613421 IGKV1D-37A0A075B6S9 117 aa10.71□□□□□ -0.69
GGA3-220ENST00000613421 C5orf56Q8N8D9 126 aa10.71□□□□□ -0.69
GGA3-220ENST00000613421 FRMD6-AS1P0C7T7 363 aa10.71□□□□□ -0.69
GGA3-220ENST00000613421 TDRG1Q3Y452 100 aa10.71□□□□□ -0.69
GGA3-220ENST00000613421 S100A7L2Q5SY68 101 aa10.71□□□□□ -0.69
GGA3-220ENST00000613421 LINC00173Q6ZV60 143 aa10.71□□□□□ -0.7
GGA3-220ENST00000613421 GATD1Q8NB37 220 aa10.71□□□□□ -0.7
GGA3-220ENST00000613421 HOXD3P31249 432 aaPredicted RBP10.71□□□□□ -0.7
GGA3-220ENST00000613421 C1orf229Q6ZS94 237 aaPredicted RBP10.71□□□□□ -0.7
GGA3-220ENST00000613421 CEND1Q8N111 149 aa10.71□□□□□ -0.7
GGA3-220ENST00000613421 MSRB1Q9NZV6 116 aa10.71□□□□□ -0.7
GGA3-220ENST00000613421 K7EMI3 77 aa10.7□□□□□ -0.7
GGA3-220ENST00000613421 LGALS1P09382 135 aaKnown RBP10.7□□□□□ -0.7
GGA3-220ENST00000613421 BLCAPP62952 87 aa10.7□□□□□ -0.7
GGA3-220ENST00000613421 TAL2Q16559 108 aa10.7□□□□□ -0.7
GGA3-220ENST00000613421 C16orf54Q6UWD8 224 aa10.7□□□□□ -0.7
GGA3-220ENST00000613421 IGHV3-38A0A0C4DH36 116 aa10.7□□□□□ -0.7
GGA3-220ENST00000613421 CFHR3Q02985 330 aa10.7□□□□□ -0.7
GGA3-220ENST00000613421 ZNRF2Q8NHG8 242 aa10.7□□□□□ -0.7
GGA3-220ENST00000613421 C9JAW5 83 aa10.7□□□□□ -0.7
GGA3-220ENST00000613421 K7EP34 96 aa10.7□□□□□ -0.7
GGA3-220ENST00000613421 C10orf105Q8TEF2 133 aa10.7□□□□□ -0.7
GGA3-220ENST00000613421 ZNF625Q96I27 306 aaPredicted RBP10.7□□□□□ -0.7
GGA3-220ENST00000613421 AJUBAQ96IF1 538 aa10.7□□□□□ -0.7
GGA3-220ENST00000613421 ANAPC13Q9BS18 74 aa10.7□□□□□ -0.7
GGA3-220ENST00000613421 SPRY2O43597 315 aa10.69□□□□□ -0.7
GGA3-220ENST00000613421 C22orf34Q6ZV56 151 aa10.69□□□□□ -0.7
GGA3-220ENST00000613421 LRP4O75096 1905 aa10.69□□□□□ -0.7
GGA3-220ENST00000613421 PRAC2D3DTV9 90 aa10.69□□□□□ -0.7
GGA3-220ENST00000613421 SS18Q15532 418 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms