RNA–Protein interactions for RNA: ENST00000610733.1

TPM1-233, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 3,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-233ENST00000610733 SHISA9B4DS77 424 aa7.5□□□□□ -1.21
TPM1-233ENST00000610733 I3L2K1 104 aa7.5□□□□□ -1.21
TPM1-233ENST00000610733 SAA4P35542 130 aa7.5□□□□□ -1.21
TPM1-233ENST00000610733 KLF5Q13887 457 aaPredicted RBP7.5□□□□□ -1.21
TPM1-233ENST00000610733 DTX2Q86UW9 622 aa7.5□□□□□ -1.21
TPM1-233ENST00000610733 SCRT2Q9NQ03 307 aa7.5□□□□□ -1.21
TPM1-233ENST00000610733 PRRC2AP48634 2157 aaKnown RBP7.5□□□□□ -1.21
TPM1-233ENST00000610733 LINC01548A6NM66 108 aa7.5□□□□□ -1.21
TPM1-233ENST00000610733 CFHR4Q92496 578 aa7.5□□□□□ -1.21
TPM1-233ENST00000610733 ZNF492Q9P255 531 aa7.5□□□□□ -1.21
TPM1-233ENST00000610733 A0A1B0GXF2 115 aa7.49□□□□□ -1.21
TPM1-233ENST00000610733 CD7P09564 240 aa7.49□□□□□ -1.21
TPM1-233ENST00000610733 Q6AWC8 147 aa7.49□□□□□ -1.21
TPM1-233ENST00000610733 BPESC1Q9GZL8 116 aa7.49□□□□□ -1.21
TPM1-233ENST00000610733 VCX2Q9H322 139 aa7.49□□□□□ -1.21
TPM1-233ENST00000610733 IGKV3OR2-268A0A0C4DH90 116 aa7.49□□□□□ -1.21
TPM1-233ENST00000610733 PSMB11A5LHX3 300 aa7.49□□□□□ -1.21
TPM1-233ENST00000610733 H3BRN7 92 aa7.49□□□□□ -1.21
TPM1-233ENST00000610733 ZNF688P0C7X2 276 aa7.49□□□□□ -1.21
TPM1-233ENST00000610733 ZNF562Q6V9R5 426 aa7.49□□□□□ -1.21
TPM1-233ENST00000610733 SMIM20Q8N5G0 67 aa7.49□□□□□ -1.21
TPM1-233ENST00000610733 TEX48A0A1B0GUV7 120 aa7.49□□□□□ -1.21
TPM1-233ENST00000610733 C19orf71A6NCJ1 209 aa7.49□□□□□ -1.21
TPM1-233ENST00000610733 FCN3O75636 299 aa7.49□□□□□ -1.21
TPM1-233ENST00000610733 RAX2Q96IS3 184 aa7.49□□□□□ -1.21
TPM1-233ENST00000610733 GAGE12HA6NDE8 117 aa7.48□□□□□ -1.21
TPM1-233ENST00000610733 MLST8Q9BVC4 326 aa7.48□□□□□ -1.21
TPM1-233ENST00000610733 TNRC18O15417 2968 aaPredicted RBP7.48□□□□□ -1.21
TPM1-233ENST00000610733 TRAV12-3A0A0B4J271 114 aa7.48□□□□□ -1.21
TPM1-233ENST00000610733 IGF1P05019 195 aa7.48□□□□□ -1.21
TPM1-233ENST00000610733 CR1LQ2VPA4 569 aa7.48□□□□□ -1.21
TPM1-233ENST00000610733 EEF1AKMT3Q96AZ1 226 aa7.48□□□□□ -1.21
TPM1-233ENST00000610733 SRSF8Q9BRL6 282 aaKnown RBP7.48□□□□□ -1.21
TPM1-233ENST00000610733 IGKV2D-26A0A0A0MRZ7 120 aa7.48□□□□□ -1.21
TPM1-233ENST00000610733 FAM159AQ6UWV7 190 aa7.48□□□□□ -1.21
TPM1-233ENST00000610733 OR5A1Q8NGJ0 315 aa7.48□□□□□ -1.21
TPM1-233ENST00000610733 TSSC4Q9Y5U2 329 aaPredicted RBP7.48□□□□□ -1.21
TPM1-233ENST00000610733 TRAV12-2A0A075B6T6 113 aa7.47□□□□□ -1.21
TPM1-233ENST00000610733 C9orf118A6NHY6 69 aa7.47□□□□□ -1.21
TPM1-233ENST00000610733 NPIPB6E9PJ23 425 aa7.47□□□□□ -1.21
TPM1-233ENST00000610733 GAGE5Q13069 117 aa7.47□□□□□ -1.21
TPM1-233ENST00000610733 GAGE6Q13070 117 aa7.47□□□□□ -1.21
TPM1-233ENST00000610733 OR4X2Q8NGF9 303 aa7.47□□□□□ -1.21
TPM1-233ENST00000610733 GFRA4Q9GZZ7 299 aa7.47□□□□□ -1.21
TPM1-233ENST00000610733 TNFRSF18Q9Y5U5 241 aa7.47□□□□□ -1.21
TPM1-233ENST00000610733 SIVA1O15304 175 aa7.47□□□□□ -1.21
TPM1-233ENST00000610733 DOPEY1Q5JWR5 2465 aa7.47□□□□□ -1.21
TPM1-233ENST00000610733 KLHL30-AS1Q8NEE0 82 aa7.47□□□□□ -1.21
TPM1-233ENST00000610733 RPL39LQ96EH5 51 aaKnown RBP7.47□□□□□ -1.21
TPM1-233ENST00000610733 CITED2Q99967 270 aaPredicted RBP7.47□□□□□ -1.21
TPM1-233ENST00000610733 AGPAT4-IT1Q9H0P7 198 aa7.47□□□□□ -1.21
TPM1-233ENST00000610733 NXT2Q9NPJ8 142 aaKnown RBP7.47□□□□□ -1.21
TPM1-233ENST00000610733 ADARB2-AS1A8MUL3 147 aa7.47□□□□□ -1.21
TPM1-233ENST00000610733 ASIPP42127 132 aa7.47□□□□□ -1.21
TPM1-233ENST00000610733 WFDC2Q14508 124 aa7.47□□□□□ -1.21
TPM1-233ENST00000610733 LAGE3Q14657 143 aa7.47□□□□□ -1.21
TPM1-233ENST00000610733 RNASE13Q5GAN3 156 aaKnown RBP7.47□□□□□ -1.21
TPM1-233ENST00000610733 CT83Q5H943 113 aa7.47□□□□□ -1.21
TPM1-233ENST00000610733 LINC01545Q5VT33 79 aa7.47□□□□□ -1.21
TPM1-233ENST00000610733 KNCNA6PVL3 124 aa7.46□□□□□ -1.21
TPM1-233ENST00000610733 GNRH2O43555 120 aa7.46□□□□□ -1.21
TPM1-233ENST00000610733 ATP5LO75964 103 aa7.46□□□□□ -1.21
TPM1-233ENST00000610733 KLF12Q9Y4X4 402 aa7.46□□□□□ -1.21
TPM1-233ENST00000610733 SPENQ96T58 3664 aaKnown RBP7.46□□□□□ -1.21
TPM1-233ENST00000610733 TRAV2A0A0B4J234 112 aa7.46□□□□□ -1.22
TPM1-233ENST00000610733 IGLV1-47P01700 117 aa7.46□□□□□ -1.22
TPM1-233ENST00000610733 PAX8Q06710 450 aa7.46□□□□□ -1.22
TPM1-233ENST00000610733 HIST2H2BDQ6DRA6 164 aa7.46□□□□□ -1.22
TPM1-233ENST00000610733 PRSS22Q9GZN4 317 aa7.46□□□□□ -1.22
TPM1-233ENST00000610733 A0A1W2PPM0 123 aa7.45□□□□□ -1.22
TPM1-233ENST00000610733 OVOL3O00110 214 aa7.45□□□□□ -1.22
TPM1-233ENST00000610733 SLC25A16P16260 332 aa7.45□□□□□ -1.22
TPM1-233ENST00000610733 OR9G4Q8NGQ1 327 aa7.45□□□□□ -1.22
TPM1-233ENST00000610733 TRBV25-1A0A075B6N4 114 aa7.45□□□□□ -1.22
TPM1-233ENST00000610733 IGHV4-39P01824 125 aa7.45□□□□□ -1.22
TPM1-233ENST00000610733 CTSGP08311 255 aa7.45□□□□□ -1.22
TPM1-233ENST00000610733 HLA-DRB4P13762 266 aa7.45□□□□□ -1.22
TPM1-233ENST00000610733 PRTN3P24158 256 aa7.45□□□□□ -1.22
TPM1-233ENST00000610733 ID1P41134 155 aa7.45□□□□□ -1.22
TPM1-233ENST00000610733 SRSF1Q07955 248 aaKnown RBP eCLIP7.45□□□□□ -1.227e-10■■□□□ 12.2
TPM1-233ENST00000610733 DGAT2L7PQ6IED9 249 aa7.45□□□□□ -1.22
TPM1-233ENST00000610733 C7orf69Q9H7B7 122 aa7.45□□□□□ -1.22
TPM1-233ENST00000610733 HLA-DRB4X5D2U9 266 aa7.45□□□□□ -1.22
TPM1-233ENST00000610733 TSPAN13O95857 204 aa7.45□□□□□ -1.22
TPM1-233ENST00000610733 GAGE13Q4V321 117 aa7.45□□□□□ -1.22
TPM1-233ENST00000610733 C8orf86Q6ZUL3 223 aa7.45□□□□□ -1.22
TPM1-233ENST00000610733 ANAPC13Q9BS18 74 aa7.45□□□□□ -1.22
TPM1-233ENST00000610733 A4D1N5 150 aa7.44□□□□□ -1.22
TPM1-233ENST00000610733 H3BUX3 64 aa7.44□□□□□ -1.22
TPM1-233ENST00000610733 ATP5J2P56134 94 aa7.44□□□□□ -1.22
TPM1-233ENST00000610733 IGFL2Q6UWQ7 119 aa7.44□□□□□ -1.22
TPM1-233ENST00000610733 FANCD2OSQ96PS1 177 aa7.44□□□□□ -1.22
TPM1-233ENST00000610733 RAI1Q7Z5J4 1906 aaPredicted RBP7.44□□□□□ -1.22
TPM1-233ENST00000610733 LINC01549A6NIU2 74 aa7.44□□□□□ -1.22
TPM1-233ENST00000610733 IGLV2-11P01706 119 aa7.44□□□□□ -1.22
TPM1-233ENST00000610733 HERVK_113P61574 105 aa7.44□□□□□ -1.22
TPM1-233ENST00000610733 PSMG4Q5JS54 123 aa7.44□□□□□ -1.22
TPM1-233ENST00000610733 LINC00311Q8N616 119 aa7.44□□□□□ -1.22
TPM1-233ENST00000610733 KIR2DL4Q99706 377 aa7.44□□□□□ -1.22
TPM1-233ENST00000610733 LGALS3P17931 250 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms