RNA–Protein interactions for RNA: ENST00000603731.1

HERPUD2-207, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-207ENST00000603731 AMBPP02760 352 aa9.36□□□□□ -0.91
HERPUD2-207ENST00000603731 AMTNQ6UX39 209 aa9.36□□□□□ -0.91
HERPUD2-207ENST00000603731 NUP35Q8NFH5 326 aa9.36□□□□□ -0.91
HERPUD2-207ENST00000603731 PGLYRP4Q96LB8 373 aa9.36□□□□□ -0.91
HERPUD2-207ENST00000603731 TRAV12-2A0A075B6T6 113 aa9.35□□□□□ -0.91
HERPUD2-207ENST00000603731 GRIFINA4D1Z8 144 aa9.35□□□□□ -0.91
HERPUD2-207ENST00000603731 NUTF2P61970 127 aaKnown RBP9.35□□□□□ -0.91
HERPUD2-207ENST00000603731 KIR3DS1Q14943 382 aa9.35□□□□□ -0.91
HERPUD2-207ENST00000603731 GFI1BQ5VTD9 330 aa9.35□□□□□ -0.91
HERPUD2-207ENST00000603731 FAM159AQ6UWV7 190 aa9.35□□□□□ -0.91
HERPUD2-207ENST00000603731 GTSF1Q8WW33 167 aa9.35□□□□□ -0.91
HERPUD2-207ENST00000603731 TPPP3Q9BW30 176 aa9.35□□□□□ -0.91
HERPUD2-207ENST00000603731 IGKV3D-20A0A0C4DH25 116 aa9.34□□□□□ -0.91
HERPUD2-207ENST00000603731 RBMY1BA6NDE4 496 aaKnown RBP9.34□□□□□ -0.91
HERPUD2-207ENST00000603731 RBMY1EA6NEQ0 496 aaKnown RBP9.34□□□□□ -0.91
HERPUD2-207ENST00000603731 TYMSP04818 313 aa9.34□□□□□ -0.91
HERPUD2-207ENST00000603731 RBMY1DP0C7P1 496 aaKnown RBP9.34□□□□□ -0.91
HERPUD2-207ENST00000603731 RIGQ13278 110 aa9.34□□□□□ -0.91
HERPUD2-207ENST00000603731 ANXA2RQ3ZCQ2 193 aa9.34□□□□□ -0.91
HERPUD2-207ENST00000603731 COX19Q49B96 90 aa9.34□□□□□ -0.91
HERPUD2-207ENST00000603731 MUC21Q5SSG8 566 aa9.34□□□□□ -0.91
HERPUD2-207ENST00000603731 MRPL54Q6P161 138 aaKnown RBP9.34□□□□□ -0.91
HERPUD2-207ENST00000603731 TRPT1Q86TN4 253 aaKnown RBP9.34□□□□□ -0.91
HERPUD2-207ENST00000603731 FER1L6-AS1Q8NA97 138 aa9.34□□□□□ -0.91
HERPUD2-207ENST00000603731 KCNS1Q96KK3 526 aa9.34□□□□□ -0.91
HERPUD2-207ENST00000603731 SRD5A3Q9H8P0 318 aa9.34□□□□□ -0.91
HERPUD2-207ENST00000603731 C19orf73Q9NVV2 129 aa9.34□□□□□ -0.91
HERPUD2-207ENST00000603731 C11orf21Q9P2W6 132 aa9.34□□□□□ -0.91
HERPUD2-207ENST00000603731 C1orf196B1AJZ1 125 aa9.33□□□□□ -0.92
HERPUD2-207ENST00000603731 S100A4P26447 101 aaKnown RBP9.33□□□□□ -0.92
HERPUD2-207ENST00000603731 FOXA3P55318 350 aaPredicted RBP9.33□□□□□ -0.92
HERPUD2-207ENST00000603731 Q6ZQT7 251 aa9.33□□□□□ -0.92
HERPUD2-207ENST00000603731 ATP5L2Q7Z4Y8 100 aa9.33□□□□□ -0.92
HERPUD2-207ENST00000603731 WFDC10AQ9H1F0 79 aa9.33□□□□□ -0.92
HERPUD2-207ENST00000603731 TMA7Q9Y2S6 64 aaKnown RBP9.33□□□□□ -0.92
HERPUD2-207ENST00000603731 A0A1B0GUT8 65 aa9.32□□□□□ -0.92
HERPUD2-207ENST00000603731 ZNF324O75467 553 aaPredicted RBP9.32□□□□□ -0.92
HERPUD2-207ENST00000603731 INSP01308 110 aa9.32□□□□□ -0.92
HERPUD2-207ENST00000603731 RPL35AP18077 110 aaKnown RBP9.32□□□□□ -0.92
HERPUD2-207ENST00000603731 ASIPP42127 132 aa9.32□□□□□ -0.92
HERPUD2-207ENST00000603731 RAB4BP61018 213 aa9.32□□□□□ -0.92
HERPUD2-207ENST00000603731 WDR73Q6P4I2 378 aa9.32□□□□□ -0.92
HERPUD2-207ENST00000603731 RASL11AQ6T310 242 aa9.32□□□□□ -0.92
HERPUD2-207ENST00000603731 LYZL1Q6UWQ5 148 aa9.32□□□□□ -0.92
HERPUD2-207ENST00000603731 ZMAT5Q9UDW3 170 aaKnown RBP9.32□□□□□ -0.92
HERPUD2-207ENST00000603731 TRAPPC1Q9Y5R8 145 aa9.32□□□□□ -0.92
HERPUD2-207ENST00000603731 IGHV1OR15-1A0A075B7D0 117 aa9.31□□□□□ -0.92
HERPUD2-207ENST00000603731 F2Z2F3 143 aa9.31□□□□□ -0.92
HERPUD2-207ENST00000603731 S100A8P05109 93 aa9.31□□□□□ -0.92
HERPUD2-207ENST00000603731 IGLC6P0CF74 106 aa9.31□□□□□ -0.92
HERPUD2-207ENST00000603731 HBBP68871 147 aa9.31□□□□□ -0.92
HERPUD2-207ENST00000603731 MORN3Q6PF18 240 aaPredicted RBP9.31□□□□□ -0.92
HERPUD2-207ENST00000603731 DEFB125Q8N687 156 aa9.31□□□□□ -0.92
HERPUD2-207ENST00000603731 FRZBQ92765 325 aa9.31□□□□□ -0.92
HERPUD2-207ENST00000603731 C20orf144Q9BQM9 153 aa9.31□□□□□ -0.92
HERPUD2-207ENST00000603731 KRTAP17-1Q9BYP8 105 aa9.31□□□□□ -0.92
HERPUD2-207ENST00000603731 A0A1B0GW15 77 aa9.3□□□□□ -0.92
HERPUD2-207ENST00000603731 SNURFLB1AK76 121 aa9.3□□□□□ -0.92
HERPUD2-207ENST00000603731 CRXO43186 299 aaPredicted RBP9.3□□□□□ -0.92
HERPUD2-207ENST00000603731 GNRH2O43555 120 aa9.3□□□□□ -0.92
HERPUD2-207ENST00000603731 MT-ND6P03923 174 aa9.3□□□□□ -0.92
HERPUD2-207ENST00000603731 ARMS2P0C7Q2 107 aa9.3□□□□□ -0.92
HERPUD2-207ENST00000603731 CTRLP40313 264 aa9.3□□□□□ -0.92
HERPUD2-207ENST00000603731 CAMPP49913 170 aa9.3□□□□□ -0.92
HERPUD2-207ENST00000603731 RAB5BP61020 215 aa9.3□□□□□ -0.92
HERPUD2-207ENST00000603731 C1QTNF4Q9BXJ3 329 aa9.3□□□□□ -0.92
HERPUD2-207ENST00000603731 GNB1LQ9BYB4 327 aa9.3□□□□□ -0.92
HERPUD2-207ENST00000603731 XCL2Q9UBD3 114 aa9.3□□□□□ -0.92
HERPUD2-207ENST00000603731 TIMM8BQ9Y5J9 83 aaPredicted RBP9.3□□□□□ -0.92
HERPUD2-207ENST00000603731 TRGV11A0A075B6L2 103 aa9.29□□□□□ -0.92
HERPUD2-207ENST00000603731 H3BVH4 76 aa9.29□□□□□ -0.92
HERPUD2-207ENST00000603731 HLA-DQA1P01909 254 aa9.29□□□□□ -0.92
HERPUD2-207ENST00000603731 TRGC2P03986 189 aa9.29□□□□□ -0.92
HERPUD2-207ENST00000603731 MED14OSP0DP75 135 aa9.29□□□□□ -0.92
HERPUD2-207ENST00000603731 SSTP61278 116 aa9.29□□□□□ -0.92
HERPUD2-207ENST00000603731 CACNG7P62955 275 aa9.29□□□□□ -0.92
HERPUD2-207ENST00000603731 OXLD1Q5BKU9 147 aa9.29□□□□□ -0.92
HERPUD2-207ENST00000603731 LINC01587Q99440 93 aa9.29□□□□□ -0.92
HERPUD2-207ENST00000603731 TMEM208Q9BTX3 173 aa9.29□□□□□ -0.92
HERPUD2-207ENST00000603731 BIRC6Q9NR09 4857 aa9.29□□□□□ -0.92
HERPUD2-207ENST00000603731 MUC21A0A0G2JKD1 596 aa9.28□□□□□ -0.92
HERPUD2-207ENST00000603731 MUC21A0A140T8X8 626 aa9.28□□□□□ -0.92
HERPUD2-207ENST00000603731 A0A1B0GXF2 115 aa9.28□□□□□ -0.92
HERPUD2-207ENST00000603731 CBY3A6NI87 242 aa9.28□□□□□ -0.92
HERPUD2-207ENST00000603731 OR5AL1P0C617 328 aa9.28□□□□□ -0.92
HERPUD2-207ENST00000603731 FABP9Q0Z7S8 132 aa9.28□□□□□ -0.92
HERPUD2-207ENST00000603731 TWIST1Q15672 202 aa9.28□□□□□ -0.92
HERPUD2-207ENST00000603731 TDRG1Q3Y452 100 aa9.28□□□□□ -0.92
HERPUD2-207ENST00000603731 DNLZQ5SXM8 178 aa9.28□□□□□ -0.92
HERPUD2-207ENST00000603731 SPANXN1Q5VSR9 72 aa9.28□□□□□ -0.92
HERPUD2-207ENST00000603731 TMEM136Q6ZRR5 245 aa9.28□□□□□ -0.92
HERPUD2-207ENST00000603731 TMEM256Q8N2U0 113 aa9.28□□□□□ -0.92
HERPUD2-207ENST00000603731 MRPL18Q9H0U6 180 aaKnown RBP9.28□□□□□ -0.92
HERPUD2-207ENST00000603731 GOLT1BQ9Y3E0 138 aa9.28□□□□□ -0.92
HERPUD2-207ENST00000603731 SNAI2O43623 268 aa9.27□□□□□ -0.93
HERPUD2-207ENST00000603731 FRMD6-AS1P0C7T7 363 aa9.27□□□□□ -0.93
HERPUD2-207ENST00000603731 RBMY1A1P0DJD3 496 aaKnown RBP9.27□□□□□ -0.93
HERPUD2-207ENST00000603731 RBMY1CP0DJD4 496 aa9.27□□□□□ -0.93
HERPUD2-207ENST00000603731 HTN1P15515 57 aa9.27□□□□□ -0.93
HERPUD2-207ENST00000603731 RBMY1FQ15415 496 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms