RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 STHQ8IWL8 128 aa10.6□□□□□ -0.71
ZNF548-212ENST00000602086 SSBP4Q9BWG4 385 aaPredicted RBP10.6□□□□□ -0.71
ZNF548-212ENST00000602086 CNFNQ9BYD5 112 aa10.6□□□□□ -0.71
ZNF548-212ENST00000602086 A0A1B0GUT8 65 aa10.59□□□□□ -0.71
ZNF548-212ENST00000602086 RBMY1BA6NDE4 496 aaKnown RBP10.59□□□□□ -0.71
ZNF548-212ENST00000602086 RBMY1EA6NEQ0 496 aaKnown RBP10.59□□□□□ -0.71
ZNF548-212ENST00000602086 C1orf196B1AJZ1 125 aa10.59□□□□□ -0.71
ZNF548-212ENST00000602086 S100A8P05109 93 aa10.59□□□□□ -0.71
ZNF548-212ENST00000602086 CD7P09564 240 aa10.59□□□□□ -0.71
ZNF548-212ENST00000602086 OR5AL1P0C617 328 aa10.59□□□□□ -0.71
ZNF548-212ENST00000602086 RBMY1DP0C7P1 496 aaKnown RBP10.59□□□□□ -0.71
ZNF548-212ENST00000602086 GZMBP10144 247 aa10.59□□□□□ -0.71
ZNF548-212ENST00000602086 RIGQ13278 110 aa10.59□□□□□ -0.71
ZNF548-212ENST00000602086 FER1L6-AS1Q8NA97 138 aa10.59□□□□□ -0.71
ZNF548-212ENST00000602086 GATD1Q8NB37 220 aa10.59□□□□□ -0.71
ZNF548-212ENST00000602086 BORCS7Q96B45 105 aa10.59□□□□□ -0.71
ZNF548-212ENST00000602086 PGLYRP4Q96LB8 373 aa10.59□□□□□ -0.71
ZNF548-212ENST00000602086 LINC00467Q9BRT7 94 aa10.59□□□□□ -0.71
ZNF548-212ENST00000602086 M0R2Z0 102 aa10.58□□□□□ -0.72
ZNF548-212ENST00000602086 PHOX2AO14813 284 aa10.58□□□□□ -0.72
ZNF548-212ENST00000602086 CRXO43186 299 aaPredicted RBP10.58□□□□□ -0.72
ZNF548-212ENST00000602086 SNAI2O43623 268 aa10.58□□□□□ -0.72
ZNF548-212ENST00000602086 IGKV3-20P01619 116 aa10.58□□□□□ -0.72
ZNF548-212ENST00000602086 HLA-DQA1P01909 254 aa10.58□□□□□ -0.72
ZNF548-212ENST00000602086 NUTF2P61970 127 aaKnown RBP10.58□□□□□ -0.72
ZNF548-212ENST00000602086 HBBP68871 147 aa10.58□□□□□ -0.72
ZNF548-212ENST00000602086 KIR3DS1Q14943 382 aa10.58□□□□□ -0.72
ZNF548-212ENST00000602086 ZNF124Q15973 351 aa10.58□□□□□ -0.72
ZNF548-212ENST00000602086 SPINK13Q1W4C9 94 aa10.58□□□□□ -0.72
ZNF548-212ENST00000602086 GTSCR1Q86UQ5 136 aa10.58□□□□□ -0.72
ZNF548-212ENST00000602086 IGHV4-4A0A075B6R2 117 aa10.57□□□□□ -0.72
ZNF548-212ENST00000602086 TMSB15BA0A087X1C1 80 aa10.57□□□□□ -0.72
ZNF548-212ENST00000602086 J3KRW8 73 aa10.57□□□□□ -0.72
ZNF548-212ENST00000602086 RAB5BP61020 215 aa10.57□□□□□ -0.72
ZNF548-212ENST00000602086 DEFA6Q01524 100 aa10.57□□□□□ -0.72
ZNF548-212ENST00000602086 ANXA2RQ3ZCQ2 193 aa10.57□□□□□ -0.72
ZNF548-212ENST00000602086 PRR31Q5SQ13 230 aa10.57□□□□□ -0.72
ZNF548-212ENST00000602086 MRPL54Q6P161 138 aaKnown RBP10.57□□□□□ -0.72
ZNF548-212ENST00000602086 MORN3Q6PF18 240 aaPredicted RBP10.57□□□□□ -0.72
ZNF548-212ENST00000602086 LYZL1Q6UWQ5 148 aa10.57□□□□□ -0.72
ZNF548-212ENST00000602086 FAM159AQ6UWV7 190 aa10.57□□□□□ -0.72
ZNF548-212ENST00000602086 TMEM136Q6ZRR5 245 aa10.57□□□□□ -0.72
ZNF548-212ENST00000602086 TRAV12-3A0A0B4J271 114 aa10.56□□□□□ -0.72
ZNF548-212ENST00000602086 TRGC2P03986 189 aa10.56□□□□□ -0.72
ZNF548-212ENST00000602086 CACNG7P62955 275 aa10.56□□□□□ -0.72
ZNF548-212ENST00000602086 ZMAT5Q9UDW3 170 aaKnown RBP10.56□□□□□ -0.72
ZNF548-212ENST00000602086 TRAPPC1Q9Y5R8 145 aa10.56□□□□□ -0.72
ZNF548-212ENST00000602086 IGHV1OR15-1A0A075B7D0 117 aa10.55□□□□□ -0.72
ZNF548-212ENST00000602086 SNURFLB1AK76 121 aa10.55□□□□□ -0.72
ZNF548-212ENST00000602086 INSP01308 110 aa10.55□□□□□ -0.72
ZNF548-212ENST00000602086 ARMS2P0C7Q2 107 aa10.55□□□□□ -0.72
ZNF548-212ENST00000602086 IGLL1P15814 213 aa10.55□□□□□ -0.72
ZNF548-212ENST00000602086 ASIPP42127 132 aa10.55□□□□□ -0.72
ZNF548-212ENST00000602086 Q6ZQT7 251 aa10.55□□□□□ -0.72
ZNF548-212ENST00000602086 ZNF493Q6ZR52 646 aa10.55□□□□□ -0.72
ZNF548-212ENST00000602086 TMEM256Q8N2U0 113 aa10.55□□□□□ -0.72
ZNF548-212ENST00000602086 SCRT2Q9NQ03 307 aa10.55□□□□□ -0.72
ZNF548-212ENST00000602086 TP53TG3Q9ULZ0 132 aa10.55□□□□□ -0.72
ZNF548-212ENST00000602086 TRAV12-2A0A075B6T6 113 aa10.54□□□□□ -0.72
ZNF548-212ENST00000602086 GRIFINA4D1Z8 144 aa10.54□□□□□ -0.72
ZNF548-212ENST00000602086 SPINK4O60575 86 aa10.54□□□□□ -0.72
ZNF548-212ENST00000602086 C1QTNF4Q9BXJ3 329 aa10.54□□□□□ -0.72
ZNF548-212ENST00000602086 VWFP04275 2813 aa10.53□□□□□ -0.72
ZNF548-212ENST00000602086 TRGV11A0A075B6L2 103 aa10.53□□□□□ -0.72
ZNF548-212ENST00000602086 FRMD6-AS1P0C7T7 363 aa10.53□□□□□ -0.72
ZNF548-212ENST00000602086 FABP9Q0Z7S8 132 aa10.53□□□□□ -0.72
ZNF548-212ENST00000602086 MUC21Q5SSG8 566 aa10.53□□□□□ -0.72
ZNF548-212ENST00000602086 MRPL18Q9H0U6 180 aaKnown RBP10.53□□□□□ -0.72
ZNF548-212ENST00000602086 NAGKQ9UJ70 344 aa10.53□□□□□ -0.72
ZNF548-212ENST00000602086 S100A4P26447 101 aaKnown RBP10.52□□□□□ -0.73
ZNF548-212ENST00000602086 EGFEM1PQ0D2K5 195 aa10.52□□□□□ -0.73
ZNF548-212ENST00000602086 Q8N1Y9 231 aa10.52□□□□□ -0.73
ZNF548-212ENST00000602086 FRZBQ92765 325 aa10.52□□□□□ -0.73
ZNF548-212ENST00000602086 TPPP3Q9BW30 176 aa10.52□□□□□ -0.73
ZNF548-212ENST00000602086 TMA7Q9Y2S6 64 aaKnown RBP10.52□□□□□ -0.73
ZNF548-212ENST00000602086 MEGF8Q7Z7M0 2845 aa10.52□□□□□ -0.73
ZNF548-212ENST00000602086 MGAM2Q2M2H8 2515 aa10.51□□□□□ -0.73
ZNF548-212ENST00000602086 IGHV3-16A0A0C4DH30 117 aa10.51□□□□□ -0.73
ZNF548-212ENST00000602086 GNRH2O43555 120 aa10.51□□□□□ -0.73
ZNF548-212ENST00000602086 NXPH4O95158 308 aa10.51□□□□□ -0.73
ZNF548-212ENST00000602086 RBMY1A1P0DJD3 496 aaKnown RBP10.51□□□□□ -0.73
ZNF548-212ENST00000602086 RBMY1CP0DJD4 496 aa10.51□□□□□ -0.73
ZNF548-212ENST00000602086 RNASE3P12724 160 aaKnown RBP10.51□□□□□ -0.73
ZNF548-212ENST00000602086 NTF3P20783 257 aa10.51□□□□□ -0.73
ZNF548-212ENST00000602086 CAMPP49913 170 aa10.51□□□□□ -0.73
ZNF548-212ENST00000602086 FXYD7P58549 80 aa10.51□□□□□ -0.73
ZNF548-212ENST00000602086 RBMY1FQ15415 496 aaKnown RBP10.51□□□□□ -0.73
ZNF548-212ENST00000602086 DMRTA1Q5VZB9 504 aa10.51□□□□□ -0.73
ZNF548-212ENST00000602086 C9orf85Q96MD7 179 aa10.51□□□□□ -0.73
ZNF548-212ENST00000602086 TMEM191AQ9H0A3 160 aa10.51□□□□□ -0.73
ZNF548-212ENST00000602086 NOTCH3Q9UM47 2321 aa10.5□□□□□ -0.73
ZNF548-212ENST00000602086 H3BVH4 76 aa10.5□□□□□ -0.73
ZNF548-212ENST00000602086 HIST1H2BKO60814 126 aa10.5□□□□□ -0.73
ZNF548-212ENST00000602086 APCSP02743 223 aa10.5□□□□□ -0.73
ZNF548-212ENST00000602086 HIST1H2BJP06899 126 aa10.5□□□□□ -0.73
ZNF548-212ENST00000602086 GIG44P09565 113 aaPredicted RBP10.5□□□□□ -0.73
ZNF548-212ENST00000602086 TRGC1P0CF51 173 aa10.5□□□□□ -0.73
ZNF548-212ENST00000602086 HIST1H2BOP23527 126 aa10.5□□□□□ -0.73
ZNF548-212ENST00000602086 HIST1H2BBP33778 126 aa10.5□□□□□ -0.73
ZNF548-212ENST00000602086 HIST1H2BDP58876 126 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms