RNA–Protein interactions for RNA: ENST00000600962.5

SOX2-OT-235, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 472 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-235ENST00000600962 SPINK4O60575 86 aa9.56□□□□□ -0.88
SOX2-OT-235ENST00000600962 PFN1P07737 140 aaKnown RBP9.56□□□□□ -0.88
SOX2-OT-235ENST00000600962 ZNF415Q09FC8 603 aa9.56□□□□□ -0.88
SOX2-OT-235ENST00000600962 TMEM88Q6PEY1 159 aa9.56□□□□□ -0.88
SOX2-OT-235ENST00000600962 ALKAL2Q6UX46 152 aa9.56□□□□□ -0.88
SOX2-OT-235ENST00000600962 FMC1Q96HJ9 113 aa9.56□□□□□ -0.88
SOX2-OT-235ENST00000600962 FAM210BQ96KR6 192 aa9.56□□□□□ -0.88
SOX2-OT-235ENST00000600962 NDUFAF3Q9BU61 184 aa9.56□□□□□ -0.88
SOX2-OT-235ENST00000600962 MANBALQ9NQG1 85 aa9.56□□□□□ -0.88
SOX2-OT-235ENST00000600962 RYR2Q92736 4967 aa9.56□□□□□ -0.88
SOX2-OT-235ENST00000600962 TRGV11A0A075B6L2 103 aa9.55□□□□□ -0.88
SOX2-OT-235ENST00000600962 F5H768 121 aa9.55□□□□□ -0.88
SOX2-OT-235ENST00000600962 TYMSP04818 313 aa9.55□□□□□ -0.88
SOX2-OT-235ENST00000600962 AKR1C3P42330 323 aa9.55□□□□□ -0.88
SOX2-OT-235ENST00000600962 LGALS9CQ6DKI2 356 aa9.55□□□□□ -0.88
SOX2-OT-235ENST00000600962 MRPL16Q9NX20 251 aaKnown RBP9.55□□□□□ -0.88
SOX2-OT-235ENST00000600962 IGHV3-16A0A0C4DH30 117 aa9.54□□□□□ -0.88
SOX2-OT-235ENST00000600962 TRBV6-1A0A0K0K1D8 114 aa9.54□□□□□ -0.88
SOX2-OT-235ENST00000600962 TEX46H3BTG2 121 aa9.54□□□□□ -0.88
SOX2-OT-235ENST00000600962 LTAP01374 205 aa9.54□□□□□ -0.88
SOX2-OT-235ENST00000600962 HOXA5P20719 270 aa9.54□□□□□ -0.88
SOX2-OT-235ENST00000600962 UBE2G1P62253 170 aa9.54□□□□□ -0.88
SOX2-OT-235ENST00000600962 COX8CQ7Z4L0 72 aa9.54□□□□□ -0.88
SOX2-OT-235ENST00000600962 ZC2HC1AQ96GY0 325 aa9.54□□□□□ -0.88
SOX2-OT-235ENST00000600962 SDF2L1Q9HCN8 221 aa9.54□□□□□ -0.88
SOX2-OT-235ENST00000600962 ZFP30Q9Y2G7 519 aa9.54□□□□□ -0.88
SOX2-OT-235ENST00000600962 TRGV2A0A075B6R0 118 aa9.53□□□□□ -0.88
SOX2-OT-235ENST00000600962 CRIP1P50238 77 aa9.53□□□□□ -0.88
SOX2-OT-235ENST00000600962 LGALS9BQ3B8N2 356 aa9.53□□□□□ -0.88
SOX2-OT-235ENST00000600962 KCNS1Q96KK3 526 aa9.53□□□□□ -0.88
SOX2-OT-235ENST00000600962 C18orf15Q96N68 181 aa9.53□□□□□ -0.88
SOX2-OT-235ENST00000600962 DNAH1Q9P2D7 4330 aa9.52□□□□□ -0.89
SOX2-OT-235ENST00000600962 C11orf52Q96A22 123 aa9.52□□□□□ -0.89
SOX2-OT-235ENST00000600962 SPXQ9BT56 116 aa9.52□□□□□ -0.89
SOX2-OT-235ENST00000600962 IGKV3D-20A0A0C4DH25 116 aa9.51□□□□□ -0.89
SOX2-OT-235ENST00000600962 FABP5P3A8MUU1 101 aa9.51□□□□□ -0.89
SOX2-OT-235ENST00000600962 BCL2P10415 239 aa9.51□□□□□ -0.89
SOX2-OT-235ENST00000600962 NHLRC2Q8NBF2 726 aa9.51□□□□□ -0.89
SOX2-OT-235ENST00000600962 DERL1Q9BUN8 251 aa9.51□□□□□ -0.89
SOX2-OT-235ENST00000600962 HYDINQ4G0P3 5121 aa9.51□□□□□ -0.89
SOX2-OT-235ENST00000600962 SH2D1AO60880 128 aa9.5□□□□□ -0.89
SOX2-OT-235ENST00000600962 IFNA1P01562 189 aa9.5□□□□□ -0.89
SOX2-OT-235ENST00000600962 S100A9P06702 114 aaKnown RBP9.5□□□□□ -0.89
SOX2-OT-235ENST00000600962 MEF2BQ02080 365 aaPredicted RBP9.5□□□□□ -0.89
SOX2-OT-235ENST00000600962 OR5I1Q13606 314 aa9.5□□□□□ -0.89
SOX2-OT-235ENST00000600962 ZNF674Q2M3X9 581 aa9.5□□□□□ -0.89
SOX2-OT-235ENST00000600962 C15orf53Q8NAA6 179 aa9.5□□□□□ -0.89
SOX2-OT-235ENST00000600962 RASL10AQ92737 203 aa9.5□□□□□ -0.89
SOX2-OT-235ENST00000600962 TXNDC17Q9BRA2 123 aa9.5□□□□□ -0.89
SOX2-OT-235ENST00000600962 TRAV26-1A0A087WT03 109 aa9.49□□□□□ -0.89
SOX2-OT-235ENST00000600962 M0R2P5 195 aa9.49□□□□□ -0.89
SOX2-OT-235ENST00000600962 IGHV3-53P01767 116 aa9.49□□□□□ -0.89
SOX2-OT-235ENST00000600962 RNASE3P12724 160 aaKnown RBP9.49□□□□□ -0.89
SOX2-OT-235ENST00000600962 RPL35P42766 123 aaKnown RBP9.49□□□□□ -0.89
SOX2-OT-235ENST00000600962 BLOC1S1P78537 153 aa9.49□□□□□ -0.89
SOX2-OT-235ENST00000600962 FAM162BQ5T6X4 162 aa9.49□□□□□ -0.89
SOX2-OT-235ENST00000600962 BAGE2Q86Y30 109 aa9.49□□□□□ -0.89
SOX2-OT-235ENST00000600962 LYPD6BQ8NI32 183 aa9.49□□□□□ -0.89
SOX2-OT-235ENST00000600962 C9orf85Q96MD7 179 aa9.49□□□□□ -0.89
SOX2-OT-235ENST00000600962 MLST8Q9BVC4 326 aa9.49□□□□□ -0.89
SOX2-OT-235ENST00000600962 A0A0J9YY99 117 aa9.48□□□□□ -0.89
SOX2-OT-235ENST00000600962 B4DEV8 164 aa9.48□□□□□ -0.89
SOX2-OT-235ENST00000600962 KRBOX1C9JBD0 128 aa9.48□□□□□ -0.89
SOX2-OT-235ENST00000600962 M0R036 132 aa9.48□□□□□ -0.89
SOX2-OT-235ENST00000600962 PDE6DO43924 150 aa9.48□□□□□ -0.89
SOX2-OT-235ENST00000600962 NUDT3O95989 172 aa9.48□□□□□ -0.89
SOX2-OT-235ENST00000600962 ORM1P02763 201 aa9.48□□□□□ -0.89
SOX2-OT-235ENST00000600962 P0DMU3 169 aa9.48□□□□□ -0.89
SOX2-OT-235ENST00000600962 FAM231AP0DMU4 169 aa9.48□□□□□ -0.89
SOX2-OT-235ENST00000600962 FAM231CP0DMU5 169 aa9.48□□□□□ -0.89
SOX2-OT-235ENST00000600962 ZNF575Q86XF7 245 aa9.48□□□□□ -0.89
SOX2-OT-235ENST00000600962 POM121L12Q8N7R1 296 aa9.48□□□□□ -0.89
SOX2-OT-235ENST00000600962 VAX2Q9UIW0 290 aa9.48□□□□□ -0.89
SOX2-OT-235ENST00000600962 SFTA3P0C7M3 94 aa9.47□□□□□ -0.89
SOX2-OT-235ENST00000600962 LINC01559Q495D7 138 aa9.47□□□□□ -0.89
SOX2-OT-235ENST00000600962 VSIG2Q96IQ7 327 aa9.47□□□□□ -0.89
SOX2-OT-235ENST00000600962 ZNF479Q96JC4 524 aa9.47□□□□□ -0.89
SOX2-OT-235ENST00000600962 TAGLN2P37802 199 aaKnown RBP9.46□□□□□ -0.9
SOX2-OT-235ENST00000600962 ASIPP42127 132 aa9.46□□□□□ -0.9
SOX2-OT-235ENST00000600962 FHL2Q14192 279 aa9.46□□□□□ -0.9
SOX2-OT-235ENST00000600962 CENPWQ5EE01 88 aa9.46□□□□□ -0.9
SOX2-OT-235ENST00000600962 TRBV20OR9-2A0A075B6H5 130 aa9.45□□□□□ -0.9
SOX2-OT-235ENST00000600962 TMSB15BA0A087X1C1 80 aa9.45□□□□□ -0.9
SOX2-OT-235ENST00000600962 TRAV4A0A0B4J268 109 aa9.45□□□□□ -0.9
SOX2-OT-235ENST00000600962 RAB19A4D1S5 217 aa9.45□□□□□ -0.9
SOX2-OT-235ENST00000600962 GRIFINA4D1Z8 144 aa9.45□□□□□ -0.9
SOX2-OT-235ENST00000600962 PGPEP1LA6NFU8 196 aa9.45□□□□□ -0.9
SOX2-OT-235ENST00000600962 C9JCJ5 164 aa9.45□□□□□ -0.9
SOX2-OT-235ENST00000600962 H3BNG1 76 aa9.45□□□□□ -0.9
SOX2-OT-235ENST00000600962 IGLV2-8P01709 118 aa9.45□□□□□ -0.9
SOX2-OT-235ENST00000600962 S100A4P26447 101 aaKnown RBP9.45□□□□□ -0.9
SOX2-OT-235ENST00000600962 ZNF876PQ49A33 203 aa9.45□□□□□ -0.9
SOX2-OT-235ENST00000600962 ZNF506Q5JVG8 444 aa9.45□□□□□ -0.9
SOX2-OT-235ENST00000600962 DNLZQ5SXM8 178 aa9.45□□□□□ -0.9
SOX2-OT-235ENST00000600962 PRR27Q6MZM9 219 aa9.45□□□□□ -0.9
SOX2-OT-235ENST00000600962 MED9Q9NWA0 146 aa9.45□□□□□ -0.9
SOX2-OT-235ENST00000600962 RBFOX3A6NFN3 312 aa9.44□□□□□ -0.9
SOX2-OT-235ENST00000600962 H3BVH4 76 aa9.44□□□□□ -0.9
SOX2-OT-235ENST00000600962 RPL19P84098 196 aaKnown RBP9.44□□□□□ -0.9
SOX2-OT-235ENST00000600962 TEX261Q6UWH6 196 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms