RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 NPIPB6E9PJ23 425 aa11.93□□□□□ -0.5
SSBP4-207ENST00000600244 PRB4P10163 310 aaPredicted RBP11.93□□□□□ -0.5
SSBP4-207ENST00000600244 HOXA5P20719 270 aa11.93□□□□□ -0.5
SSBP4-207ENST00000600244 C9orf47Q6ZRZ4 202 aa11.93□□□□□ -0.5
SSBP4-207ENST00000600244 CCDC28AQ8IWP9 274 aa11.93□□□□□ -0.5
SSBP4-207ENST00000600244 DIRC3C9JPN6 131 aa11.92□□□□□ -0.5
SSBP4-207ENST00000600244 UBE2G2P60604 165 aa11.92□□□□□ -0.5
SSBP4-207ENST00000600244 SUMO1P63165 101 aaKnown RBP11.92□□□□□ -0.5
SSBP4-207ENST00000600244 BLOC1S1P78537 153 aa11.92□□□□□ -0.5
SSBP4-207ENST00000600244 C5orf17Q8NAS9 161 aa11.92□□□□□ -0.5
SSBP4-207ENST00000600244 NKX6-2Q9C056 277 aaPredicted RBP11.92□□□□□ -0.5
SSBP4-207ENST00000600244 PKHD1L1Q86WI1 4243 aa11.92□□□□□ -0.5
SSBP4-207ENST00000600244 IGLV5-52A0A0A0MRZ9 124 aa11.91□□□□□ -0.5
SSBP4-207ENST00000600244 A0A1B0GV50 99 aa11.91□□□□□ -0.5
SSBP4-207ENST00000600244 RBAKDNA6NC62 111 aa11.91□□□□□ -0.5
SSBP4-207ENST00000600244 TEX46H3BTG2 121 aa11.91□□□□□ -0.5
SSBP4-207ENST00000600244 SLC25A5P05141 298 aaKnown RBP11.91□□□□□ -0.5
SSBP4-207ENST00000600244 PPT1P50897 306 aa11.91□□□□□ -0.5
SSBP4-207ENST00000600244 KRTAP10-4P60372 401 aaPredicted RBP11.91□□□□□ -0.5
SSBP4-207ENST00000600244 HIST1H1AQ02539 215 aaPredicted RBP11.91□□□□□ -0.5
SSBP4-207ENST00000600244 OR10J6PQ8NGY7 276 aa11.91□□□□□ -0.5
SSBP4-207ENST00000600244 ODF3Q96PU9 254 aa11.91□□□□□ -0.5
SSBP4-207ENST00000600244 AGPAT4-IT1Q9H0P7 198 aa11.91□□□□□ -0.5
SSBP4-207ENST00000600244 TIMM8BQ9Y5J9 83 aaPredicted RBP11.91□□□□□ -0.5
SSBP4-207ENST00000600244 IGKV2-40A0A087WW87 121 aaPredicted RBP11.9□□□□□ -0.5
SSBP4-207ENST00000600244 PAGE4O60829 102 aa11.9□□□□□ -0.5
SSBP4-207ENST00000600244 INSP01308 110 aa11.9□□□□□ -0.5
SSBP4-207ENST00000600244 IFNA7P01567 189 aa11.9□□□□□ -0.5
SSBP4-207ENST00000600244 IGKV2D-40P01614 121 aaPredicted RBP11.9□□□□□ -0.5
SSBP4-207ENST00000600244 CSN1S1P47710 185 aa11.9□□□□□ -0.5
SSBP4-207ENST00000600244 IFITM2Q01629 132 aa11.9□□□□□ -0.5
SSBP4-207ENST00000600244 LINC00612Q8N6U2 182 aa11.9□□□□□ -0.5
SSBP4-207ENST00000600244 FAM19A4Q96LR4 140 aa11.9□□□□□ -0.5
SSBP4-207ENST00000600244 EPDR1Q9UM22 224 aa11.9□□□□□ -0.5
SSBP4-207ENST00000600244 M0R2Z0 102 aa11.89□□□□□ -0.51
SSBP4-207ENST00000600244 TCRAP04437 139 aa11.89□□□□□ -0.51
SSBP4-207ENST00000600244 CT45A10P0DMU9 189 aa11.89□□□□□ -0.51
SSBP4-207ENST00000600244 GNG5P63218 68 aa11.89□□□□□ -0.51
SSBP4-207ENST00000600244 SPINK13Q1W4C9 94 aa11.89□□□□□ -0.51
SSBP4-207ENST00000600244 CMTM2Q8TAZ6 248 aa11.89□□□□□ -0.51
SSBP4-207ENST00000600244 NTN5Q8WTR8 489 aaPredicted RBP11.89□□□□□ -0.51
SSBP4-207ENST00000600244 LINC00477Q96M19 166 aa11.89□□□□□ -0.51
SSBP4-207ENST00000600244 VGLL1Q99990 258 aa11.89□□□□□ -0.51
SSBP4-207ENST00000600244 NOP10Q9NPE3 64 aaKnown RBP11.89□□□□□ -0.51
SSBP4-207ENST00000600244 MANBALQ9NQG1 85 aa11.89□□□□□ -0.51
SSBP4-207ENST00000600244 PPP1R14DQ9NXH3 145 aa11.89□□□□□ -0.51
SSBP4-207ENST00000600244 A0A096LPF7 62 aa11.88□□□□□ -0.51
SSBP4-207ENST00000600244 SERTM2A0A1B0GWG4 89 aa11.88□□□□□ -0.51
SSBP4-207ENST00000600244 NMBP08949 121 aa11.88□□□□□ -0.51
SSBP4-207ENST00000600244 ERCC8Q13216 396 aa11.88□□□□□ -0.51
SSBP4-207ENST00000600244 TCEAL7Q9BRU2 100 aa11.88□□□□□ -0.51
SSBP4-207ENST00000600244 ZNF492Q9P255 531 aa11.88□□□□□ -0.51
SSBP4-207ENST00000600244 GNG13Q9P2W3 67 aa11.88□□□□□ -0.51
SSBP4-207ENST00000600244 TRBV7-9A0A0J9YWB2 115 aa11.87□□□□□ -0.51
SSBP4-207ENST00000600244 IGLV2-11P01706 119 aa11.87□□□□□ -0.51
SSBP4-207ENST00000600244 CST9LP1Q5W188 147 aa11.87□□□□□ -0.51
SSBP4-207ENST00000600244 GOLT1AQ6ZVE7 132 aa11.87□□□□□ -0.51
SSBP4-207ENST00000600244 C16orf74Q96GX8 76 aa11.87□□□□□ -0.51
SSBP4-207ENST00000600244 NXPH4O95158 308 aa11.86□□□□□ -0.51
SSBP4-207ENST00000600244 CRISP2P16562 243 aa11.86□□□□□ -0.51
SSBP4-207ENST00000600244 ZNF138P52744 262 aa11.86□□□□□ -0.51
SSBP4-207ENST00000600244 TAS2R60P59551 318 aa11.86□□□□□ -0.51
SSBP4-207ENST00000600244 Q6ZSA8 131 aa11.86□□□□□ -0.51
SSBP4-207ENST00000600244 CYB561D1Q8N8Q1 229 aa11.86□□□□□ -0.51
SSBP4-207ENST00000600244 HIST1H2BAQ96A08 127 aa11.86□□□□□ -0.51
SSBP4-207ENST00000600244 VSIG2Q96IQ7 327 aa11.86□□□□□ -0.51
SSBP4-207ENST00000600244 TXNDC17Q9BRA2 123 aa11.86□□□□□ -0.51
SSBP4-207ENST00000600244 PEX7O00628 323 aa11.85□□□□□ -0.51
SSBP4-207ENST00000600244 BCL2P10415 239 aa11.85□□□□□ -0.51
SSBP4-207ENST00000600244 TMEM78Q5T7P6 136 aa11.85□□□□□ -0.51
SSBP4-207ENST00000600244 ZNF493Q6ZR52 646 aa11.85□□□□□ -0.51
SSBP4-207ENST00000600244 RNASE8Q8TDE3 154 aaKnown RBP11.85□□□□□ -0.51
SSBP4-207ENST00000600244 LINC01587Q99440 93 aa11.85□□□□□ -0.51
SSBP4-207ENST00000600244 KLF12Q9Y4X4 402 aa11.85□□□□□ -0.51
SSBP4-207ENST00000600244 LENEPQ9Y5L5 61 aa11.85□□□□□ -0.51
SSBP4-207ENST00000600244 TRAV8-1A0A0A6YYK1 113 aa11.84□□□□□ -0.51
SSBP4-207ENST00000600244 LRCOL1A6NCL2 159 aa11.84□□□□□ -0.51
SSBP4-207ENST00000600244 KLLNB2CW77 178 aa11.84□□□□□ -0.51
SSBP4-207ENST00000600244 TAGLN2P37802 199 aaKnown RBP11.84□□□□□ -0.51
SSBP4-207ENST00000600244 CDKN1BP46527 198 aa11.84□□□□□ -0.51
SSBP4-207ENST00000600244 KIR3DS1Q14943 382 aa11.84□□□□□ -0.51
SSBP4-207ENST00000600244 ZFAND2AQ8N6M9 145 aa11.84□□□□□ -0.51
SSBP4-207ENST00000600244 Q8TAT8 98 aa11.84□□□□□ -0.51
SSBP4-207ENST00000600244 PCNPQ8WW12 178 aaKnown RBP11.84□□□□□ -0.51
SSBP4-207ENST00000600244 TVP23CQ96ET8 276 aa11.84□□□□□ -0.51
SSBP4-207ENST00000600244 VAX2Q9UIW0 290 aa11.84□□□□□ -0.51
SSBP4-207ENST00000600244 RPH3ALQ9UNE2 315 aa11.84□□□□□ -0.51
SSBP4-207ENST00000600244 TRAV12-2A0A075B6T6 113 aa11.83□□□□□ -0.52
SSBP4-207ENST00000600244 FBLL1A6NHQ2 334 aaKnown RBP11.83□□□□□ -0.52
SSBP4-207ENST00000600244 IFNA1P01562 189 aa11.83□□□□□ -0.52
SSBP4-207ENST00000600244 MEF2BQ02080 365 aaPredicted RBP11.83□□□□□ -0.52
SSBP4-207ENST00000600244 TMEM256Q8N2U0 113 aa11.83□□□□□ -0.52
SSBP4-207ENST00000600244 TMEM75Q8N9X5 138 aa11.83□□□□□ -0.52
SSBP4-207ENST00000600244 C11orf52Q96A22 123 aa11.83□□□□□ -0.52
SSBP4-207ENST00000600244 LINC00479Q96M42 142 aa11.83□□□□□ -0.52
SSBP4-207ENST00000600244 MSRB1Q9NZV6 116 aa11.83□□□□□ -0.52
SSBP4-207ENST00000600244 TRBV6-1A0A0K0K1D8 114 aa11.82□□□□□ -0.52
SSBP4-207ENST00000600244 K7EQM0 130 aa11.82□□□□□ -0.52
SSBP4-207ENST00000600244 LEPP41159 167 aa11.82□□□□□ -0.52
SSBP4-207ENST00000600244 PSG8Q9UQ74 426 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms