RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 PET117Q6UWS5 81 aa16.32■□□□□ 0.2
GRAMD1A-212ENST00000600231 UFC1Q9Y3C8 167 aa16.32■□□□□ 0.2
GRAMD1A-212ENST00000600231 TCF21O43680 179 aa16.31■□□□□ 0.2
GRAMD1A-212ENST00000600231 PPBPP02775 128 aa16.31■□□□□ 0.2
GRAMD1A-212ENST00000600231 WFDC3Q8IUB2 231 aa16.31■□□□□ 0.2
GRAMD1A-212ENST00000600231 KRTAP1-3Q8IUG1 177 aa16.31■□□□□ 0.2
GRAMD1A-212ENST00000600231 FAM19A4Q96LR4 140 aa16.31■□□□□ 0.2
GRAMD1A-212ENST00000600231 H3BVH4 76 aa16.3■□□□□ 0.2
GRAMD1A-212ENST00000600231 DCANP1Q8TF63 244 aa16.3■□□□□ 0.2
GRAMD1A-212ENST00000600231 SNAI2O43623 268 aa16.3■□□□□ 0.2
GRAMD1A-212ENST00000600231 Q6ZN92 141 aa16.3■□□□□ 0.2
GRAMD1A-212ENST00000600231 DUX5Q96PT3 197 aa16.3■□□□□ 0.2
GRAMD1A-212ENST00000600231 TRAV21A0A0B4J279 112 aa16.29■□□□□ 0.2
GRAMD1A-212ENST00000600231 GATA1P15976 413 aaPredicted RBP16.29■□□□□ 0.2
GRAMD1A-212ENST00000600231 PMCHL2Q9BQD1 86 aa16.29■□□□□ 0.2
GRAMD1A-212ENST00000600231 CCDC168Q8NDH2 2452 aa16.29■□□□□ 0.2
GRAMD1A-212ENST00000600231 SPANXN1Q5VSR9 72 aa16.29■□□□□ 0.2
GRAMD1A-212ENST00000600231 SONP18583 2426 aaKnown RBP16.29■□□□□ 0.2
GRAMD1A-212ENST00000600231 RNASE4P34096 147 aaKnown RBP16.28■□□□□ 0.2
GRAMD1A-212ENST00000600231 CHD6Q8TD26 2715 aa16.28■□□□□ 0.2
GRAMD1A-212ENST00000600231 hDV102S1A0JD36 115 aa16.28■□□□□ 0.2
GRAMD1A-212ENST00000600231 TNFRSF6BO95407 300 aa16.28■□□□□ 0.2
GRAMD1A-212ENST00000600231 MRPL52Q86TS9 123 aaKnown RBP16.28■□□□□ 0.2
GRAMD1A-212ENST00000600231 SORL1Q92673 2214 aa16.28■□□□□ 0.2
GRAMD1A-212ENST00000600231 ITPR3Q14573 2671 aa16.28■□□□□ 0.2
GRAMD1A-212ENST00000600231 IGHV4-4A0A075B6R2 117 aa16.27■□□□□ 0.2
GRAMD1A-212ENST00000600231 ELANEP08246 267 aa16.27■□□□□ 0.2
GRAMD1A-212ENST00000600231 LINC01545Q5VT33 79 aa16.27■□□□□ 0.2
GRAMD1A-212ENST00000600231 MAP1LC3AQ9H492 121 aa16.27■□□□□ 0.2
GRAMD1A-212ENST00000600231 MYOZ3Q8TDC0 251 aa16.27■□□□□ 0.2
GRAMD1A-212ENST00000600231 SPRY2O43597 315 aa16.26■□□□□ 0.19
GRAMD1A-212ENST00000600231 LGALS1P09382 135 aaKnown RBP16.26■□□□□ 0.19
GRAMD1A-212ENST00000600231 SYNJ2BPP57105 145 aa16.26■□□□□ 0.19
GRAMD1A-212ENST00000600231 IGHV4OR15-8A0A075B7B6 117 aa16.26■□□□□ 0.19
GRAMD1A-212ENST00000600231 A0A087WW49 117 aa16.26■□□□□ 0.19
GRAMD1A-212ENST00000600231 HBDP02042 147 aa16.26■□□□□ 0.19
GRAMD1A-212ENST00000600231 ID1P41134 155 aa16.26■□□□□ 0.19
GRAMD1A-212ENST00000600231 TFPI2P48307 235 aa16.26■□□□□ 0.19
GRAMD1A-212ENST00000600231 HNRNPA3P51991 378 aaKnown RBP16.26■□□□□ 0.19
GRAMD1A-212ENST00000600231 ANXA2RQ3ZCQ2 193 aa16.26■□□□□ 0.19
GRAMD1A-212ENST00000600231 SMIM15Q7Z3B0 74 aa16.26■□□□□ 0.19
GRAMD1A-212ENST00000600231 APRG1Q8IVJ8 170 aa16.26■□□□□ 0.19
GRAMD1A-212ENST00000600231 LAMTOR2Q9Y2Q5 125 aa16.26■□□□□ 0.19
GRAMD1A-212ENST00000600231 NUTF2P61970 127 aaKnown RBP16.25■□□□□ 0.19
GRAMD1A-212ENST00000600231 MS4A6AQ9H2W1 248 aa16.25■□□□□ 0.19
GRAMD1A-212ENST00000600231 TENM4Q6N022 2769 aa16.25■□□□□ 0.19
GRAMD1A-212ENST00000600231 CACNG7P62955 275 aa16.25■□□□□ 0.19
GRAMD1A-212ENST00000600231 BATFQ16520 125 aa16.25■□□□□ 0.19
GRAMD1A-212ENST00000600231 UBE2E2Q96LR5 201 aa16.24■□□□□ 0.19
GRAMD1A-212ENST00000600231 TRAV26-2A0A0B4J265 109 aa16.24■□□□□ 0.19
GRAMD1A-212ENST00000600231 TRBV7-9A0A0J9YWB2 115 aa16.24■□□□□ 0.19
GRAMD1A-212ENST00000600231 TSPOP30536 169 aa16.24■□□□□ 0.19
GRAMD1A-212ENST00000600231 S100A4P26447 101 aaKnown RBP16.23■□□□□ 0.19
GRAMD1A-212ENST00000600231 WFDC12Q8WWY7 111 aa16.23■□□□□ 0.19
GRAMD1A-212ENST00000600231 HIST2H2BCQ6DN03 193 aa16.23■□□□□ 0.19
GRAMD1A-212ENST00000600231 ST20Q9HBF5 79 aa16.23■□□□□ 0.19
GRAMD1A-212ENST00000600231 GNRH2O43555 120 aa16.22■□□□□ 0.19
GRAMD1A-212ENST00000600231 ZNF688P0C7X2 276 aa16.22■□□□□ 0.19
GRAMD1A-212ENST00000600231 HOXD3P31249 432 aaPredicted RBP16.22■□□□□ 0.19
GRAMD1A-212ENST00000600231 ZMAT5Q9UDW3 170 aaKnown RBP16.22■□□□□ 0.19
GRAMD1A-212ENST00000600231 M0R381 172 aa16.22■□□□□ 0.19
GRAMD1A-212ENST00000600231 ASIPP42127 132 aa16.22■□□□□ 0.19
GRAMD1A-212ENST00000600231 SAMD13Q5VXD3 122 aa16.22■□□□□ 0.19
GRAMD1A-212ENST00000600231 OR2K2Q8NGT1 345 aa16.22■□□□□ 0.19
GRAMD1A-212ENST00000600231 TP73-AS1Q9UF72 201 aa16.22■□□□□ 0.19
GRAMD1A-212ENST00000600231 RNF152Q8N8N0 203 aa16.21■□□□□ 0.19
GRAMD1A-212ENST00000600231 WFDC11Q8NEX6 87 aa16.21■□□□□ 0.19
GRAMD1A-212ENST00000600231 NXT2Q9NPJ8 142 aaKnown RBP16.21■□□□□ 0.19
GRAMD1A-212ENST00000600231 KLLNB2CW77 178 aa16.21■□□□□ 0.19
GRAMD1A-212ENST00000600231 HSBP1L1C9JCN9 74 aa16.21■□□□□ 0.19
GRAMD1A-212ENST00000600231 PSMG4Q5JS54 123 aa16.21■□□□□ 0.19
GRAMD1A-212ENST00000600231 AGRNO00468 2067 aa16.21■□□□□ 0.19
GRAMD1A-212ENST00000600231 LINC01546A6NGU7 62 aa16.2■□□□□ 0.18
GRAMD1A-212ENST00000600231 LINC00469Q8N7U9 141 aa16.2■□□□□ 0.18
GRAMD1A-212ENST00000600231 NRACQ8N912 160 aa16.2■□□□□ 0.18
GRAMD1A-212ENST00000600231 LGALS9O00182 355 aa16.2■□□□□ 0.18
GRAMD1A-212ENST00000600231 C18orf65Q6ZTR6 163 aa16.2■□□□□ 0.18
GRAMD1A-212ENST00000600231 PHLDA3Q9Y5J5 127 aa16.2■□□□□ 0.18
GRAMD1A-212ENST00000600231 FLNAP21333 2647 aaKnown RBP16.19■□□□□ 0.18
GRAMD1A-212ENST00000600231 LEPP41159 167 aa16.19■□□□□ 0.18
GRAMD1A-212ENST00000600231 IFI27L1Q96BM0 104 aa16.19■□□□□ 0.18
GRAMD1A-212ENST00000600231 MRPS16Q9Y3D3 137 aaKnown RBP16.19■□□□□ 0.18
GRAMD1A-212ENST00000600231 IGLV2-18A0A075B6J9 118 aa16.18■□□□□ 0.18
GRAMD1A-212ENST00000600231 K7EQG2 157 aa16.18■□□□□ 0.18
GRAMD1A-212ENST00000600231 RNASE3P12724 160 aaKnown RBP16.18■□□□□ 0.18
GRAMD1A-212ENST00000600231 Q8N2B8 174 aa16.18■□□□□ 0.18
GRAMD1A-212ENST00000600231 SCRT2Q9NQ03 307 aa16.18■□□□□ 0.18
GRAMD1A-212ENST00000600231 DEFB136Q30KP8 78 aa16.18■□□□□ 0.18
GRAMD1A-212ENST00000600231 MUC4Q99102 2169 aa16.17■□□□□ 0.18
GRAMD1A-212ENST00000600231 SNRPD3P62318 126 aaKnown RBP16.17■□□□□ 0.18
GRAMD1A-212ENST00000600231 Q8N8P6 123 aa16.17■□□□□ 0.18
GRAMD1A-212ENST00000600231 C18orf15Q96N68 181 aa16.17■□□□□ 0.18
GRAMD1A-212ENST00000600231 FCER1GP30273 86 aa16.16■□□□□ 0.18
GRAMD1A-212ENST00000600231 GOLT1BQ9Y3E0 138 aa16.16■□□□□ 0.18
GRAMD1A-212ENST00000600231 IGKV3-20P01619 116 aa16.16■□□□□ 0.18
GRAMD1A-212ENST00000600231 LGALS9BQ3B8N2 356 aa16.16■□□□□ 0.18
GRAMD1A-212ENST00000600231 LGALS9CQ6DKI2 356 aa16.16■□□□□ 0.18
GRAMD1A-212ENST00000600231 C14orf178Q8N769 122 aaPredicted RBP16.16■□□□□ 0.18
GRAMD1A-212ENST00000600231 MED14OSP0DP75 135 aa16.15■□□□□ 0.18
GRAMD1A-212ENST00000600231 TRAV12-3A0A0B4J271 114 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms