RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026		Q6ZQT7	251 aa		15.89	■□□□□ 0.13
LTBP4-227	ENST00000600026	ISOC2	Q96AB3	205 aa		15.89	■□□□□ 0.13
LTBP4-227	ENST00000600026	KCNS1	Q96KK3	526 aa		15.89	■□□□□ 0.13
LTBP4-227	ENST00000600026	C19orf71	A6NCJ1	209 aa		15.88	■□□□□ 0.13
LTBP4-227	ENST00000600026		P01737	135 aa		15.88	■□□□□ 0.13
LTBP4-227	ENST00000600026	ERVFC1-1	P60608	527 aa		15.88	■□□□□ 0.13
LTBP4-227	ENST00000600026	MUC21	Q5SSG8	566 aa		15.88	■□□□□ 0.13
LTBP4-227	ENST00000600026	IBA57	Q5T440	356 aa	Known RBP	15.88	■□□□□ 0.13
LTBP4-227	ENST00000600026	ZNF705A	Q6ZN79	300 aa	Predicted RBP	15.88	■□□□□ 0.13
LTBP4-227	ENST00000600026	FAM231D	Q6ZW35	169 aa		15.88	■□□□□ 0.13
LTBP4-227	ENST00000600026	LINC00467	Q9BRT7	94 aa		15.88	■□□□□ 0.13
LTBP4-227	ENST00000600026		X6R8D5	127 aa		15.88	■□□□□ 0.13
LTBP4-227	ENST00000600026	C15orf54	Q8N8G6	183 aa		15.87	■□□□□ 0.13
LTBP4-227	ENST00000600026	NUDT10	Q8NFP7	164 aa		15.87	■□□□□ 0.13
LTBP4-227	ENST00000600026	NUDT11	Q96G61	164 aa		15.87	■□□□□ 0.13
LTBP4-227	ENST00000600026	RNASE7	Q9H1E1	156 aa	Known RBP	15.87	■□□□□ 0.13
LTBP4-227	ENST00000600026	TMEM189	A5PLL7	270 aa		15.86	■□□□□ 0.13
LTBP4-227	ENST00000600026		B4DEV8	164 aa		15.86	■□□□□ 0.13
LTBP4-227	ENST00000600026		M0R036	132 aa		15.86	■□□□□ 0.13
LTBP4-227	ENST00000600026	GATC	O43716	136 aa	Known RBP	15.86	■□□□□ 0.13
LTBP4-227	ENST00000600026	HTN1	P15515	57 aa		15.86	■□□□□ 0.13
LTBP4-227	ENST00000600026	ANXA2R	Q3ZCQ2	193 aa		15.86	■□□□□ 0.13
LTBP4-227	ENST00000600026	LINC01559	Q495D7	138 aa		15.86	■□□□□ 0.13
LTBP4-227	ENST00000600026	OSTC	Q9NRP0	149 aa		15.86	■□□□□ 0.13
LTBP4-227	ENST00000600026	C11orf21	Q9P2W6	132 aa		15.86	■□□□□ 0.13
LTBP4-227	ENST00000600026	CBY3	A6NI87	242 aa		15.85	■□□□□ 0.13
LTBP4-227	ENST00000600026	APOC3	P02656	99 aa		15.85	■□□□□ 0.13
LTBP4-227	ENST00000600026	TDRG1	Q3Y452	100 aa		15.85	■□□□□ 0.13
LTBP4-227	ENST00000600026	SFRP2	Q96HF1	295 aa		15.85	■□□□□ 0.13
LTBP4-227	ENST00000600026	NEU1	Q99519	415 aa		15.85	■□□□□ 0.13
LTBP4-227	ENST00000600026	TRGV11	A0A075B6L2	103 aa		15.84	■□□□□ 0.13
LTBP4-227	ENST00000600026	SMIM9	A6NGZ8	99 aa		15.84	■□□□□ 0.13
LTBP4-227	ENST00000600026	ZNF705G	A8MUZ8	300 aa	Predicted RBP	15.84	■□□□□ 0.13
LTBP4-227	ENST00000600026	RPS20	P60866	119 aa	Known RBP	15.84	■□□□□ 0.13
LTBP4-227	ENST00000600026	RRN3P1	Q2M238	152 aa		15.84	■□□□□ 0.13
LTBP4-227	ENST00000600026		Q8NAQ8	132 aa		15.84	■□□□□ 0.13
LTBP4-227	ENST00000600026	OR2D3	Q8NGH3	330 aa		15.84	■□□□□ 0.13
LTBP4-227	ENST00000600026	OR10G8	Q8NGN5	311 aa		15.84	■□□□□ 0.13
LTBP4-227	ENST00000600026	RPP21	Q9H633	154 aa	Known RBP	15.84	■□□□□ 0.13
LTBP4-227	ENST00000600026	EDA2R	Q9HAV5	297 aa		15.84	■□□□□ 0.13
LTBP4-227	ENST00000600026	IGKV3D-20	A0A0C4DH25	116 aa		15.83	■□□□□ 0.12
LTBP4-227	ENST00000600026	XKRY2	A2RUG3	117 aa		15.83	■□□□□ 0.12
LTBP4-227	ENST00000600026	MIF	P14174	115 aa		15.83	■□□□□ 0.12
LTBP4-227	ENST00000600026	TMSB15B	A0A087X1C1	80 aa		15.82	■□□□□ 0.12
LTBP4-227	ENST00000600026	IGHV4-28	A0A0C4DH34	117 aa		15.82	■□□□□ 0.12
LTBP4-227	ENST00000600026		A0A0J9YWU9	116 aa		15.82	■□□□□ 0.12
LTBP4-227	ENST00000600026	PPP1R2P9	O14990	202 aa		15.82	■□□□□ 0.12
LTBP4-227	ENST00000600026	MT-ND4L	P03901	98 aa		15.82	■□□□□ 0.12
LTBP4-227	ENST00000600026	SVBP	Q8N300	66 aa		15.82	■□□□□ 0.12
LTBP4-227	ENST00000600026	DNAH7	Q8WXX0	4024 aa		15.81	■□□□□ 0.12
LTBP4-227	ENST00000600026	TYMS	P04818	313 aa		15.81	■□□□□ 0.12
LTBP4-227	ENST00000600026	RPL19	P84098	196 aa	Known RBP	15.81	■□□□□ 0.12
LTBP4-227	ENST00000600026	GNRH2	O43555	120 aa		15.8	■□□□□ 0.12
LTBP4-227	ENST00000600026	SNAPIN	O95295	136 aa		15.8	■□□□□ 0.12
LTBP4-227	ENST00000600026	CXCL1	P09341	107 aa		15.8	■□□□□ 0.12
LTBP4-227	ENST00000600026	S100A4	P26447	101 aa	Known RBP	15.8	■□□□□ 0.12
LTBP4-227	ENST00000600026	ASIP	P42127	132 aa		15.8	■□□□□ 0.12
LTBP4-227	ENST00000600026	CT83	Q5H943	113 aa		15.8	■□□□□ 0.12
LTBP4-227	ENST00000600026	ZNF493	Q6ZR52	646 aa		15.8	■□□□□ 0.12
LTBP4-227	ENST00000600026	CLRN3	Q8NCR9	226 aa		15.8	■□□□□ 0.12
LTBP4-227	ENST00000600026	TMEM263	Q8WUH6	116 aa	Known RBP	15.8	■□□□□ 0.12
LTBP4-227	ENST00000600026	ANAPC16	Q96DE5	110 aa		15.8	■□□□□ 0.12
LTBP4-227	ENST00000600026	C16orf74	Q96GX8	76 aa		15.8	■□□□□ 0.12
LTBP4-227	ENST00000600026	C11orf68	Q9H3H3	251 aa	Known RBP	15.8	■□□□□ 0.12
LTBP4-227	ENST00000600026	TP53TG3	Q9ULZ0	132 aa		15.8	■□□□□ 0.12
LTBP4-227	ENST00000600026	GRIFIN	A4D1Z8	144 aa		15.79	■□□□□ 0.12
LTBP4-227	ENST00000600026		A8MWL6	223 aa		15.79	■□□□□ 0.12
LTBP4-227	ENST00000600026	DEFB4A	O15263	64 aa		15.79	■□□□□ 0.12
LTBP4-227	ENST00000600026	RNF212	Q495C1	297 aa		15.79	■□□□□ 0.12
LTBP4-227	ENST00000600026	PRM2	P04554	102 aa		15.78	■□□□□ 0.12
LTBP4-227	ENST00000600026	AZU1	P20160	251 aa		15.78	■□□□□ 0.12
LTBP4-227	ENST00000600026	ZNF415	Q09FC8	603 aa		15.78	■□□□□ 0.12
LTBP4-227	ENST00000600026	RHEB	Q15382	184 aa		15.78	■□□□□ 0.12
LTBP4-227	ENST00000600026	WWC2-AS2	Q96NR7	200 aa		15.78	■□□□□ 0.12
LTBP4-227	ENST00000600026		V9GYV3	84 aa		15.78	■□□□□ 0.12
LTBP4-227	ENST00000600026	IGHV3-16	A0A0C4DH30	117 aa		15.77	■□□□□ 0.12
LTBP4-227	ENST00000600026	DNLZ	Q5SXM8	178 aa		15.77	■□□□□ 0.12
LTBP4-227	ENST00000600026	STAB2	Q8WWQ8	2551 aa		15.77	■□□□□ 0.11
LTBP4-227	ENST00000600026	SNURFL	B1AK76	121 aa		15.76	■□□□□ 0.11
LTBP4-227	ENST00000600026	RNASE8	Q8TDE3	154 aa	Known RBP	15.76	■□□□□ 0.11
LTBP4-227	ENST00000600026	CTDSP1	Q9GZU7	261 aa		15.76	■□□□□ 0.11
LTBP4-227	ENST00000600026	C7orf77	A4D0Y5	90 aa		15.75	■□□□□ 0.11
LTBP4-227	ENST00000600026	GZMB	P10144	247 aa		15.75	■□□□□ 0.11
LTBP4-227	ENST00000600026	MDFIC	Q9P1T7	246 aa		15.75	■□□□□ 0.11
LTBP4-227	ENST00000600026		A0A1W2PPQ1	181 aa		15.74	■□□□□ 0.11
LTBP4-227	ENST00000600026	MED14OS	P0DP75	135 aa		15.74	■□□□□ 0.11
LTBP4-227	ENST00000600026	C11orf72	Q8NBR9	251 aa		15.74	■□□□□ 0.11
LTBP4-227	ENST00000600026	TSKU	Q8WUA8	353 aa		15.74	■□□□□ 0.11
LTBP4-227	ENST00000600026	SPX	Q9BT56	116 aa		15.74	■□□□□ 0.11
LTBP4-227	ENST00000600026	RPS10P5	Q9NQ39	176 aa		15.74	■□□□□ 0.11
LTBP4-227	ENST00000600026	GSN-AS1	Q9NRJ2	163 aa		15.74	■□□□□ 0.11
LTBP4-227	ENST00000600026	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	15.74	■□□□□ 0.11
LTBP4-227	ENST00000600026		A0A087WWC5	75 aa		15.73	■□□□□ 0.11
LTBP4-227	ENST00000600026		H3BVH4	76 aa		15.73	■□□□□ 0.11
LTBP4-227	ENST00000600026	ATP6V1G1	O75348	118 aa		15.73	■□□□□ 0.11
LTBP4-227	ENST00000600026	ARMS2	P0C7Q2	107 aa		15.73	■□□□□ 0.11
LTBP4-227	ENST00000600026	TCL1A	P56279	114 aa		15.73	■□□□□ 0.11
LTBP4-227	ENST00000600026	ZNF575	Q86XF7	245 aa		15.73	■□□□□ 0.11
LTBP4-227	ENST00000600026	FER1L6-AS1	Q8NA97	138 aa		15.73	■□□□□ 0.11
LTBP4-227	ENST00000600026	GFRA4	Q9GZZ7	299 aa		15.73	■□□□□ 0.11

Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms