RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 EGR2P11161 476 aaPredicted RBP9.34□□□□□ -0.91
SCN8A-208ENST00000599343 ORMDL1Q9P0S3 153 aa9.34□□□□□ -0.91
SCN8A-208ENST00000599343 E9PQ18 207 aa9.34□□□□□ -0.91
SCN8A-208ENST00000599343 SIVA1O15304 175 aa9.34□□□□□ -0.91
SCN8A-208ENST00000599343 PI4KAP42356 2102 aa9.33□□□□□ -0.92
SCN8A-208ENST00000599343 ANK1P16157 1881 aa9.33□□□□□ -0.92
SCN8A-208ENST00000599343 TMEM258P61165 79 aa9.33□□□□□ -0.92
SCN8A-208ENST00000599343 LINC00311Q8N616 119 aa9.33□□□□□ -0.92
SCN8A-208ENST00000599343 PROK2Q9HC23 129 aa9.33□□□□□ -0.92
SCN8A-208ENST00000599343 COL6A6A6NMZ7 2263 aa9.33□□□□□ -0.92
SCN8A-208ENST00000599343 DIDO1Q9BTC0 2240 aaKnown RBP9.33□□□□□ -0.92
SCN8A-208ENST00000599343 B5MCH6 92 aa9.33□□□□□ -0.92
SCN8A-208ENST00000599343 RPL18AQ02543 176 aaKnown RBP9.33□□□□□ -0.92
SCN8A-208ENST00000599343 ZNF491Q8N8L2 437 aa9.33□□□□□ -0.92
SCN8A-208ENST00000599343 C5orf38Q86SI9 138 aa9.33□□□□□ -0.92
SCN8A-208ENST00000599343 K7EMI3 77 aa9.32□□□□□ -0.92
SCN8A-208ENST00000599343 C11orf52Q96A22 123 aa9.32□□□□□ -0.92
SCN8A-208ENST00000599343 ZNF524Q96C55 264 aa9.32□□□□□ -0.92
SCN8A-208ENST00000599343 ZNF747Q9BV97 191 aa9.32□□□□□ -0.92
SCN8A-208ENST00000599343 IGLC7A0M8Q6 106 aa9.32□□□□□ -0.92
SCN8A-208ENST00000599343 RHOHQ15669 191 aa9.32□□□□□ -0.92
SCN8A-208ENST00000599343 SPANXDQ9BXN6 97 aa9.32□□□□□ -0.92
SCN8A-208ENST00000599343 TRAV4A0A0B4J268 109 aa9.31□□□□□ -0.92
SCN8A-208ENST00000599343 SH2D6Q7Z4S9 175 aa9.31□□□□□ -0.92
SCN8A-208ENST00000599343 SLC25A29Q8N8R3 303 aa9.31□□□□□ -0.92
SCN8A-208ENST00000599343 RPL39LQ96EH5 51 aaKnown RBP9.31□□□□□ -0.92
SCN8A-208ENST00000599343 COL4A6Q14031 1691 aa9.31□□□□□ -0.92
SCN8A-208ENST00000599343 K7ENP7 123 aa9.31□□□□□ -0.92
SCN8A-208ENST00000599343 DEFB136Q30KP8 78 aa9.31□□□□□ -0.92
SCN8A-208ENST00000599343 AGPAT4-IT1Q9H0P7 198 aa9.31□□□□□ -0.92
SCN8A-208ENST00000599343 NCOR1P1Q9H4R4 102 aa9.31□□□□□ -0.92
SCN8A-208ENST00000599343 FOXI2Q6ZQN5 318 aa9.3□□□□□ -0.92
SCN8A-208ENST00000599343 ZNF493Q6ZR52 646 aa9.3□□□□□ -0.92
SCN8A-208ENST00000599343 APRG1Q8IVJ8 170 aa9.3□□□□□ -0.92
SCN8A-208ENST00000599343 IGHG2P01859 326 aa9.3□□□□□ -0.92
SCN8A-208ENST00000599343 HOXB4P17483 251 aaPredicted RBP9.3□□□□□ -0.92
SCN8A-208ENST00000599343 PRR20EP86478 221 aa9.3□□□□□ -0.92
SCN8A-208ENST00000599343 PRR20CP86479 221 aa9.3□□□□□ -0.92
SCN8A-208ENST00000599343 PRR20DP86480 221 aa9.3□□□□□ -0.92
SCN8A-208ENST00000599343 PRR20BP86481 221 aa9.3□□□□□ -0.92
SCN8A-208ENST00000599343 PRR20AP86496 221 aa9.3□□□□□ -0.92
SCN8A-208ENST00000599343 SRSF2Q01130 221 aaKnown RBP9.3□□□□□ -0.92
SCN8A-208ENST00000599343 WIPF2Q8TF74 440 aaPredicted RBP9.3□□□□□ -0.92
SCN8A-208ENST00000599343 GPR179Q6PRD1 2367 aa9.3□□□□□ -0.92
SCN8A-208ENST00000599343 ABCA4P78363 2273 aa9.3□□□□□ -0.92
SCN8A-208ENST00000599343 IGLV10-54A0A075B6I4 117 aa9.3□□□□□ -0.92
SCN8A-208ENST00000599343 BUB3O43684 328 aa9.3□□□□□ -0.92
SCN8A-208ENST00000599343 IGKV3D-7A0A0C4DH55 119 aa9.29□□□□□ -0.92
SCN8A-208ENST00000599343 DKK4Q9UBT3 224 aa9.29□□□□□ -0.92
SCN8A-208ENST00000599343 RSPO1Q2MKA7 263 aaPredicted RBP9.29□□□□□ -0.92
SCN8A-208ENST00000599343 LINC00173Q6ZV60 143 aa9.28□□□□□ -0.92
SCN8A-208ENST00000599343 COX7B2Q8TF08 81 aa9.28□□□□□ -0.92
SCN8A-208ENST00000599343 CHKB-CPT1BH3BT56 60 aa9.28□□□□□ -0.92
SCN8A-208ENST00000599343 IGHV4-59P01825 116 aa9.28□□□□□ -0.92
SCN8A-208ENST00000599343 ETDCA0A1B0GVM5 59 aa9.28□□□□□ -0.92
SCN8A-208ENST00000599343 J3QLI3 93 aa9.28□□□□□ -0.92
SCN8A-208ENST00000599343 WFDC9Q8NEX5 89 aa9.28□□□□□ -0.92
SCN8A-208ENST00000599343 WDR90Q96KV7 1748 aa9.28□□□□□ -0.92
SCN8A-208ENST00000599343 ELANEP08246 267 aa9.27□□□□□ -0.92
SCN8A-208ENST00000599343 ZFP2Q6ZN57 461 aa9.27□□□□□ -0.92
SCN8A-208ENST00000599343 IGLV1-44P01699 117 aa9.27□□□□□ -0.93
SCN8A-208ENST00000599343 DEFB112Q30KQ8 113 aa9.27□□□□□ -0.93
SCN8A-208ENST00000599343 MUSTN1Q8IVN3 82 aa9.27□□□□□ -0.93
SCN8A-208ENST00000599343 IGLL5B9A064 214 aa9.27□□□□□ -0.93
SCN8A-208ENST00000599343 ETV2O00321 342 aaPredicted RBP9.27□□□□□ -0.93
SCN8A-208ENST00000599343 IGHV3-30P01768 117 aa9.27□□□□□ -0.93
SCN8A-208ENST00000599343 IGHV3-33P01772 117 aa9.27□□□□□ -0.93
SCN8A-208ENST00000599343 IGHV3-30-3P0DP02 117 aa9.27□□□□□ -0.93
SCN8A-208ENST00000599343 IGHV3-30-5P0DP03 117 aa9.27□□□□□ -0.93
SCN8A-208ENST00000599343 TEX48A0A1B0GUV7 120 aa9.26□□□□□ -0.93
SCN8A-208ENST00000599343 PRSS47A8MTI9 375 aa9.26□□□□□ -0.93
SCN8A-208ENST00000599343 SLURP1P55000 103 aa9.26□□□□□ -0.93
SCN8A-208ENST00000599343 DAND5Q8N907 189 aa9.26□□□□□ -0.93
SCN8A-208ENST00000599343 ZMAT4Q9H898 229 aa9.26□□□□□ -0.93
SCN8A-208ENST00000599343 USF3Q68DE3 2245 aa9.26□□□□□ -0.93
SCN8A-208ENST00000599343 HERV-K104P63124 156 aa9.26□□□□□ -0.93
SCN8A-208ENST00000599343 ICOSQ9Y6W8 199 aa9.26□□□□□ -0.93
SCN8A-208ENST00000599343 TRPM7Q96QT4 1865 aa9.26□□□□□ -0.93
SCN8A-208ENST00000599343 LY6G6EA0A0G2JKS1 128 aa9.25□□□□□ -0.93
SCN8A-208ENST00000599343 CAMK2N2Q96S95 79 aa9.25□□□□□ -0.93
SCN8A-208ENST00000599343 U3KQA8 63 aa9.25□□□□□ -0.93
SCN8A-208ENST00000599343 DOCK7Q96N67 2140 aa9.25□□□□□ -0.93
SCN8A-208ENST00000599343 NCR3O14931 201 aa9.25□□□□□ -0.93
SCN8A-208ENST00000599343 FUSP35637 526 aaKnown RBP eCLIP9.25□□□□□ -0.93
SCN8A-208ENST00000599343 SPRNQ5BIV9 151 aa9.25□□□□□ -0.93
SCN8A-208ENST00000599343 TIMM17AQ99595 171 aa9.25□□□□□ -0.93
SCN8A-208ENST00000599343 C1orf43Q9BWL3 253 aa9.25□□□□□ -0.93
SCN8A-208ENST00000599343 ESM1Q9NQ30 184 aa9.25□□□□□ -0.93
SCN8A-208ENST00000599343 CCL24O00175 119 aa9.25□□□□□ -0.93
SCN8A-208ENST00000599343 GYPEP15421 78 aa9.25□□□□□ -0.93
SCN8A-208ENST00000599343 NUPR1O60356 82 aa9.25□□□□□ -0.93
SCN8A-208ENST00000599343 HIST2H2BCQ6DN03 193 aa9.25□□□□□ -0.93
SCN8A-208ENST00000599343 DEFB125Q8N687 156 aa9.25□□□□□ -0.93
SCN8A-208ENST00000599343 SND1-IT1Q9HBX3 110 aa9.25□□□□□ -0.93
SCN8A-208ENST00000599343 MSRB1Q9NZV6 116 aa9.25□□□□□ -0.93
SCN8A-208ENST00000599343 CTSZQ9UBR2 303 aa9.25□□□□□ -0.93
SCN8A-208ENST00000599343 FAM215AQ9Y5M1 114 aa9.25□□□□□ -0.93
SCN8A-208ENST00000599343 RBAKDNA6NC62 111 aa9.24□□□□□ -0.93
SCN8A-208ENST00000599343 ANKRD39Q53RE8 183 aa9.24□□□□□ -0.93
SCN8A-208ENST00000599343 ATRXP46100 2492 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms