RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 M0R036 132 aa10.16□□□□□ -0.78
IRF3-223ENST00000599223 NBEAP1P0C6P0 100 aa10.16□□□□□ -0.78
IRF3-223ENST00000599223 KRTAP10-2P60368 255 aa10.16□□□□□ -0.78
IRF3-223ENST00000599223 OR5I1Q13606 314 aa10.16□□□□□ -0.78
IRF3-223ENST00000599223 SPATA12Q7Z6I5 190 aa10.16□□□□□ -0.78
IRF3-223ENST00000599223 TCEAL7Q9BRU2 100 aa10.16□□□□□ -0.78
IRF3-223ENST00000599223 GAGE12BA1L429 117 aa10.15□□□□□ -0.78
IRF3-223ENST00000599223 GAGE7O76087 117 aa10.15□□□□□ -0.78
IRF3-223ENST00000599223 GAGE12FP0CL80 117 aa10.15□□□□□ -0.78
IRF3-223ENST00000599223 GAGE12GP0CL81 117 aa10.15□□□□□ -0.78
IRF3-223ENST00000599223 GAGE12IP0CL82 117 aa10.15□□□□□ -0.78
IRF3-223ENST00000599223 CT45A10P0DMU9 189 aa10.15□□□□□ -0.78
IRF3-223ENST00000599223 PYYP10082 97 aa10.15□□□□□ -0.78
IRF3-223ENST00000599223 HIST1H1EP10412 219 aaKnown RBP10.15□□□□□ -0.78
IRF3-223ENST00000599223 ADCYAP1P18509 176 aa10.15□□□□□ -0.78
IRF3-223ENST00000599223 PNRC1Q12796 327 aaPredicted RBP10.15□□□□□ -0.78
IRF3-223ENST00000599223 ZNF674Q2M3X9 581 aa10.15□□□□□ -0.78
IRF3-223ENST00000599223 OR10J6PQ8NGY7 276 aa10.15□□□□□ -0.78
IRF3-223ENST00000599223 BLNKQ8WV28 456 aa10.15□□□□□ -0.78
IRF3-223ENST00000599223 FXYD5Q96DB9 178 aa10.15□□□□□ -0.78
IRF3-223ENST00000599223 TVP23CQ96ET8 276 aa10.15□□□□□ -0.78
IRF3-223ENST00000599223 ZNF503Q96F45 646 aa10.15□□□□□ -0.78
IRF3-223ENST00000599223 SMIM7Q9BQ49 75 aa10.15□□□□□ -0.78
IRF3-223ENST00000599223 C20orf144Q9BQM9 153 aa10.15□□□□□ -0.78
IRF3-223ENST00000599223 Q9H8V8 135 aa10.15□□□□□ -0.78
IRF3-223ENST00000599223 ESRGQ1W209 222 aa10.14□□□□□ -0.79
IRF3-223ENST00000599223 Q6ZTI0 123 aa10.14□□□□□ -0.79
IRF3-223ENST00000599223 Q9H3A6 140 aa10.14□□□□□ -0.79
IRF3-223ENST00000599223 TRAV12-3A0A0B4J271 114 aa10.13□□□□□ -0.79
IRF3-223ENST00000599223 NPIPB6E9PJ23 425 aa10.13□□□□□ -0.79
IRF3-223ENST00000599223 SUMO1P63165 101 aaKnown RBP10.13□□□□□ -0.79
IRF3-223ENST00000599223 CLRN3Q8NCR9 226 aa10.13□□□□□ -0.79
IRF3-223ENST00000599223 UPK3BQ9BT76 320 aa10.13□□□□□ -0.79
IRF3-223ENST00000599223 RANP62826 216 aaKnown RBP10.12□□□□□ -0.79
IRF3-223ENST00000599223 PDE6HQ13956 83 aa10.12□□□□□ -0.79
IRF3-223ENST00000599223 RHEBQ15382 184 aa10.12□□□□□ -0.79
IRF3-223ENST00000599223 TMEM241Q24JQ0 296 aa10.12□□□□□ -0.79
IRF3-223ENST00000599223 LYPD1Q8N2G4 141 aa10.12□□□□□ -0.79
IRF3-223ENST00000599223 CMTM2Q8TAZ6 248 aa10.12□□□□□ -0.79
IRF3-223ENST00000599223 C11orf52Q96A22 123 aa10.12□□□□□ -0.79
IRF3-223ENST00000599223 VSIG2Q96IQ7 327 aa10.12□□□□□ -0.79
IRF3-223ENST00000599223 ODF3Q96PU9 254 aa10.12□□□□□ -0.79
IRF3-223ENST00000599223 PARLQ9H300 379 aa10.12□□□□□ -0.79
IRF3-223ENST00000599223 AAMDCQ9H7C9 122 aa10.12□□□□□ -0.79
IRF3-223ENST00000599223 ZNF586Q9NXT0 402 aa10.12□□□□□ -0.79
IRF3-223ENST00000599223 NAT8Q9UHE5 227 aa10.12□□□□□ -0.79
IRF3-223ENST00000599223 PRELID1Q9Y255 219 aa10.12□□□□□ -0.79
IRF3-223ENST00000599223 MRPS16Q9Y3D3 137 aaKnown RBP10.12□□□□□ -0.79
IRF3-223ENST00000599223 SCO2A0A1W2PP80 73 aa10.11□□□□□ -0.79
IRF3-223ENST00000599223 B4DEV8 164 aa10.11□□□□□ -0.79
IRF3-223ENST00000599223 M0R3E3 92 aa10.11□□□□□ -0.79
IRF3-223ENST00000599223 NDUFB4O95168 129 aa10.11□□□□□ -0.79
IRF3-223ENST00000599223 SLC25A5P05141 298 aaKnown RBP10.11□□□□□ -0.79
IRF3-223ENST00000599223 AKR1C3P42330 323 aa10.11□□□□□ -0.79
IRF3-223ENST00000599223 TTC32Q5I0X7 151 aa10.11□□□□□ -0.79
IRF3-223ENST00000599223 Q8N1X5 172 aa10.11□□□□□ -0.79
IRF3-223ENST00000599223 C11orf72Q8NBR9 251 aa10.11□□□□□ -0.79
IRF3-223ENST00000599223 HIST1H2BAQ96A08 127 aa10.11□□□□□ -0.79
IRF3-223ENST00000599223 OTORQ9NRC9 128 aa10.11□□□□□ -0.79
IRF3-223ENST00000599223 PGPA6NDG6 321 aa10.1□□□□□ -0.79
IRF3-223ENST00000599223 SNURFLB1AK76 121 aa10.1□□□□□ -0.79
IRF3-223ENST00000599223 K7EQM0 130 aa10.1□□□□□ -0.79
IRF3-223ENST00000599223 S100A9P06702 114 aaKnown RBP10.1□□□□□ -0.79
IRF3-223ENST00000599223 LEPP41159 167 aa10.1□□□□□ -0.79
IRF3-223ENST00000599223 ERCC8Q13216 396 aa10.1□□□□□ -0.79
IRF3-223ENST00000599223 C5orf17Q8NAS9 161 aa10.1□□□□□ -0.79
IRF3-223ENST00000599223 RPS10P5Q9NQ39 176 aa10.1□□□□□ -0.79
IRF3-223ENST00000599223 GSN-AS1Q9NRJ2 163 aa10.1□□□□□ -0.79
IRF3-223ENST00000599223 FAT1Q14517 4588 aa10.09□□□□□ -0.79
IRF3-223ENST00000599223 HERC1Q15751 4861 aa10.09□□□□□ -0.79
IRF3-223ENST00000599223 TRBV19A0A075B6N1 114 aa10.09□□□□□ -0.79
IRF3-223ENST00000599223 A0A096LPF7 62 aa10.09□□□□□ -0.79
IRF3-223ENST00000599223 GGTLC3B5MD39 225 aa10.09□□□□□ -0.79
IRF3-223ENST00000599223 H3BNG1 76 aa10.09□□□□□ -0.79
IRF3-223ENST00000599223 CSN1S1P47710 185 aa10.09□□□□□ -0.79
IRF3-223ENST00000599223 LINC00315P59091 139 aa10.09□□□□□ -0.79
IRF3-223ENST00000599223 UBE2G1P62253 170 aa10.09□□□□□ -0.79
IRF3-223ENST00000599223 DAZ2Q13117 558 aaKnown RBP10.09□□□□□ -0.79
IRF3-223ENST00000599223 BTN1A1Q13410 526 aa10.09□□□□□ -0.79
IRF3-223ENST00000599223 Q6ZRN7 208 aaPredicted RBP10.09□□□□□ -0.79
IRF3-223ENST00000599223 PYGO2Q9BRQ0 406 aa10.09□□□□□ -0.79
IRF3-223ENST00000599223 C7orf71A4D174 169 aa10.08□□□□□ -0.8
IRF3-223ENST00000599223 KLLNB2CW77 178 aa10.08□□□□□ -0.8
IRF3-223ENST00000599223 PEX7O00628 323 aa10.08□□□□□ -0.8
IRF3-223ENST00000599223 ZNF253O75346 499 aa10.08□□□□□ -0.8
IRF3-223ENST00000599223 FUSP35637 526 aaKnown RBP eCLIP10.08□□□□□ -0.8
IRF3-223ENST00000599223 GNG4P50150 75 aa10.08□□□□□ -0.8
IRF3-223ENST00000599223 ADIRFQ15847 76 aa10.08□□□□□ -0.8
IRF3-223ENST00000599223 PRR9Q5T870 116 aa10.08□□□□□ -0.8
IRF3-223ENST00000599223 Q6ZQT7 251 aa10.08□□□□□ -0.8
IRF3-223ENST00000599223 FAM19A4Q96LR4 140 aa10.08□□□□□ -0.8
IRF3-223ENST00000599223 SDF2L1Q9HCN8 221 aa10.08□□□□□ -0.8
IRF3-223ENST00000599223 SCRT2Q9NQ03 307 aa10.08□□□□□ -0.8
IRF3-223ENST00000599223 EPDR1Q9UM22 224 aa10.08□□□□□ -0.8
IRF3-223ENST00000599223 A0A1W2PPQ1 181 aa10.07□□□□□ -0.8
IRF3-223ENST00000599223 C7orf77A4D0Y5 90 aa10.07□□□□□ -0.8
IRF3-223ENST00000599223 C9JCJ5 164 aa10.07□□□□□ -0.8
IRF3-223ENST00000599223 MT-ND4LP03901 98 aa10.07□□□□□ -0.8
IRF3-223ENST00000599223 BTF3P20290 206 aaKnown RBP10.07□□□□□ -0.8
IRF3-223ENST00000599223 RPL35P42766 123 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms