RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 TRAV12-2A0A075B6T6 113 aa14.63□□□□□ -0.07
IRF3-221ENST00000598808 INSP01308 110 aa14.63□□□□□ -0.07
IRF3-221ENST00000598808 PRNTQ86SH4 94 aa14.63□□□□□ -0.07
IRF3-221ENST00000598808 NUDT10Q8NFP7 164 aa14.63□□□□□ -0.07
IRF3-221ENST00000598808 NUDT11Q96G61 164 aa14.63□□□□□ -0.07
IRF3-221ENST00000598808 WWC2-AS2Q96NR7 200 aa14.63□□□□□ -0.07
IRF3-221ENST00000598808 GOLT1BQ9Y3E0 138 aa14.63□□□□□ -0.07
IRF3-221ENST00000598808 STAB2Q8WWQ8 2551 aa14.63□□□□□ -0.07
IRF3-221ENST00000598808 C19orf71A6NCJ1 209 aa14.63□□□□□ -0.07
IRF3-221ENST00000598808 FAM231BA6NCW3 169 aa14.63□□□□□ -0.07
IRF3-221ENST00000598808 AMBPP02760 352 aa14.63□□□□□ -0.07
IRF3-221ENST00000598808 TMEM78Q5T7P6 136 aa14.63□□□□□ -0.07
IRF3-221ENST00000598808 NHLRC2Q8NBF2 726 aa14.63□□□□□ -0.07
IRF3-221ENST00000598808 A0A0J9YWU9 116 aa14.62□□□□□ -0.07
IRF3-221ENST00000598808 A8MTW9 85 aa14.62□□□□□ -0.07
IRF3-221ENST00000598808 NPIPB6E9PJ23 425 aa14.62□□□□□ -0.07
IRF3-221ENST00000598808 P01737 135 aa14.62□□□□□ -0.07
IRF3-221ENST00000598808 S100A6P06703 90 aa14.62□□□□□ -0.07
IRF3-221ENST00000598808 TSKUQ8WUA8 353 aa14.62□□□□□ -0.07
IRF3-221ENST00000598808 GFRA4Q9GZZ7 299 aa14.62□□□□□ -0.07
IRF3-221ENST00000598808 RPP21Q9H633 154 aaKnown RBP14.62□□□□□ -0.07
IRF3-221ENST00000598808 TRAV8-1A0A0A6YYK1 113 aa14.61□□□□□ -0.07
IRF3-221ENST00000598808 A8MWL6 223 aa14.61□□□□□ -0.07
IRF3-221ENST00000598808 DEFB4AO15263 64 aa14.61□□□□□ -0.07
IRF3-221ENST00000598808 CT45A10P0DMU9 189 aa14.61□□□□□ -0.07
IRF3-221ENST00000598808 TSPOP30536 169 aa14.61□□□□□ -0.07
IRF3-221ENST00000598808 LEPP41159 167 aa14.61□□□□□ -0.07
IRF3-221ENST00000598808 RASL11AQ6T310 242 aa14.61□□□□□ -0.07
IRF3-221ENST00000598808 CSNK1G2-AS1Q8NCQ2 148 aa14.61□□□□□ -0.07
IRF3-221ENST00000598808 NDFIP1Q9BT67 221 aa14.61□□□□□ -0.07
IRF3-221ENST00000598808 TRGC2P03986 189 aa14.6□□□□□ -0.07
IRF3-221ENST00000598808 CDKN1BP46527 198 aa14.6□□□□□ -0.07
IRF3-221ENST00000598808 VGLL1Q99990 258 aa14.6□□□□□ -0.07
IRF3-221ENST00000598808 DNAH7Q8WXX0 4024 aa14.6□□□□□ -0.07
IRF3-221ENST00000598808 MT-ND6P03923 174 aa14.59□□□□□ -0.07
IRF3-221ENST00000598808 PRR27Q6MZM9 219 aa14.59□□□□□ -0.07
IRF3-221ENST00000598808 WDR73Q6P4I2 378 aa14.59□□□□□ -0.07
IRF3-221ENST00000598808 Q8TAT8 98 aa14.59□□□□□ -0.07
IRF3-221ENST00000598808 SGK494Q96LW2 274 aa14.59□□□□□ -0.07
IRF3-221ENST00000598808 NAT8BQ9UHF3 227 aa14.59□□□□□ -0.07
IRF3-221ENST00000598808 ZFP82Q8N141 532 aa14.58□□□□□ -0.08
IRF3-221ENST00000598808 LINC00477Q96M19 166 aa14.58□□□□□ -0.08
IRF3-221ENST00000598808 AGPAT4-IT1Q9H0P7 198 aa14.58□□□□□ -0.08
IRF3-221ENST00000598808 EDA2RQ9HAV5 297 aa14.58□□□□□ -0.08
IRF3-221ENST00000598808 IGHV4-28A0A0C4DH34 117 aa14.57□□□□□ -0.08
IRF3-221ENST00000598808 PHOX2AO14813 284 aa14.57□□□□□ -0.08
IRF3-221ENST00000598808 ATP5L2Q7Z4Y8 100 aa14.57□□□□□ -0.08
IRF3-221ENST00000598808 X6R8D5 127 aa14.57□□□□□ -0.08
IRF3-221ENST00000598808 MIFP14174 115 aa14.57□□□□□ -0.08
IRF3-221ENST00000598808 C9orf47Q6ZRZ4 202 aa14.57□□□□□ -0.08
IRF3-221ENST00000598808 GNB1LQ9BYB4 327 aa14.57□□□□□ -0.08
IRF3-221ENST00000598808 LENEPQ9Y5L5 61 aa14.57□□□□□ -0.08
IRF3-221ENST00000598808 C5orf52A6NGY3 159 aa14.56□□□□□ -0.08
IRF3-221ENST00000598808 CRXO43186 299 aaPredicted RBP14.56□□□□□ -0.08
IRF3-221ENST00000598808 HTN1P15515 57 aa14.56□□□□□ -0.08
IRF3-221ENST00000598808 ZNF138P52744 262 aa14.56□□□□□ -0.08
IRF3-221ENST00000598808 KIR3DS1Q14943 382 aa14.56□□□□□ -0.08
IRF3-221ENST00000598808 C1orf158Q8N1D5 194 aa14.56□□□□□ -0.08
IRF3-221ENST00000598808 ZC2HC1AQ96GY0 325 aa14.56□□□□□ -0.08
IRF3-221ENST00000598808 ODF3Q96PU9 254 aa14.56□□□□□ -0.08
IRF3-221ENST00000598808 LINC01587Q99440 93 aa14.56□□□□□ -0.08
IRF3-221ENST00000598808 XKRY2A2RUG3 117 aa14.55□□□□□ -0.08
IRF3-221ENST00000598808 HIST1H2BKO60814 126 aa14.55□□□□□ -0.08
IRF3-221ENST00000598808 HIST1H2BJP06899 126 aa14.55□□□□□ -0.08
IRF3-221ENST00000598808 HIST1H2BOP23527 126 aa14.55□□□□□ -0.08
IRF3-221ENST00000598808 HIST1H2BBP33778 126 aa14.55□□□□□ -0.08
IRF3-221ENST00000598808 EMP1P54849 157 aa14.55□□□□□ -0.08
IRF3-221ENST00000598808 HIST1H2BDP58876 126 aa14.55□□□□□ -0.08
IRF3-221ENST00000598808 HIST1H2BCP62807 126 aa14.55□□□□□ -0.08
IRF3-221ENST00000598808 HIST2H2BEQ16778 126 aa14.55□□□□□ -0.08
IRF3-221ENST00000598808 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.55□□□□□ -0.08
IRF3-221ENST00000598808 FAM162BQ5T6X4 162 aa14.55□□□□□ -0.08
IRF3-221ENST00000598808 GFI1BQ5VTD9 330 aa14.55□□□□□ -0.08
IRF3-221ENST00000598808 Q6AWC8 147 aa14.55□□□□□ -0.08
IRF3-221ENST00000598808 ZNF705AQ6ZN79 300 aaPredicted RBP14.55□□□□□ -0.08
IRF3-221ENST00000598808 HIST1H2BHQ93079 126 aa14.55□□□□□ -0.08
IRF3-221ENST00000598808 HIST1H2BNQ99877 126 aa14.55□□□□□ -0.08
IRF3-221ENST00000598808 HIST1H2BMQ99879 126 aa14.55□□□□□ -0.08
IRF3-221ENST00000598808 TRAPPC1Q9Y5R8 145 aa14.55□□□□□ -0.08
IRF3-221ENST00000598808 TRAV12-3A0A0B4J271 114 aa14.54□□□□□ -0.08
IRF3-221ENST00000598808 GPX1P07203 203 aa14.54□□□□□ -0.08
IRF3-221ENST00000598808 SMUG1Q53HV7 270 aa14.54□□□□□ -0.08
IRF3-221ENST00000598808 Q8NAQ8 132 aa14.54□□□□□ -0.08
IRF3-221ENST00000598808 FRZBQ92765 325 aa14.54□□□□□ -0.08
IRF3-221ENST00000598808 TRGC1P0CF51 173 aa14.53□□□□□ -0.08
IRF3-221ENST00000598808 RNASE4P34096 147 aaKnown RBP14.53□□□□□ -0.08
IRF3-221ENST00000598808 FOXA3P55318 350 aaPredicted RBP14.53□□□□□ -0.08
IRF3-221ENST00000598808 RPS20P60866 119 aaKnown RBP14.53□□□□□ -0.08
IRF3-221ENST00000598808 RRN3P1Q2M238 152 aa14.53□□□□□ -0.08
IRF3-221ENST00000598808 NEU1Q99519 415 aa14.53□□□□□ -0.08
IRF3-221ENST00000598808 C11orf68Q9H3H3 251 aaKnown RBP14.53□□□□□ -0.08
IRF3-221ENST00000598808 TRBV7-9A0A0J9YWB2 115 aa14.52□□□□□ -0.08
IRF3-221ENST00000598808 HLA-DQA1P01909 254 aa14.52□□□□□ -0.08
IRF3-221ENST00000598808 RBMY1A1P0DJD3 496 aaKnown RBP14.52□□□□□ -0.08
IRF3-221ENST00000598808 RBMY1CP0DJD4 496 aa14.52□□□□□ -0.08
IRF3-221ENST00000598808 RBMY1FQ15415 496 aaKnown RBP14.52□□□□□ -0.08
IRF3-221ENST00000598808 OR2D3Q8NGH3 330 aa14.52□□□□□ -0.08
IRF3-221ENST00000598808 MUC7Q8TAX7 377 aa14.52□□□□□ -0.08
IRF3-221ENST00000598808 KMT2CQ8NEZ4 4911 aaKnown RBP14.52□□□□□ -0.09
IRF3-221ENST00000598808 C7orf71A4D174 169 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms