RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 PRNTQ86SH4 94 aa11.2□□□□□ -0.62
USHBP1-206ENST00000596436 GSN-AS1Q9NRJ2 163 aa11.2□□□□□ -0.62
USHBP1-206ENST00000596436 IGLV2-18A0A075B6J9 118 aa11.19□□□□□ -0.62
USHBP1-206ENST00000596436 HTN3P15516 51 aa11.19□□□□□ -0.62
USHBP1-206ENST00000596436 RAB5CP51148 216 aa11.19□□□□□ -0.62
USHBP1-206ENST00000596436 ZNF80P51504 273 aaPredicted RBP11.19□□□□□ -0.62
USHBP1-206ENST00000596436 CST9LP1Q5W188 147 aa11.19□□□□□ -0.62
USHBP1-206ENST00000596436 ZNF575Q86XF7 245 aa11.19□□□□□ -0.62
USHBP1-206ENST00000596436 NKX6-2Q9C056 277 aaPredicted RBP11.19□□□□□ -0.62
USHBP1-206ENST00000596436 BOLA1Q9Y3E2 137 aa11.19□□□□□ -0.62
USHBP1-206ENST00000596436 ARL2-SNX15V9GYD0 113 aa11.19□□□□□ -0.62
USHBP1-206ENST00000596436 SNURFLB1AK76 121 aa11.18□□□□□ -0.62
USHBP1-206ENST00000596436 Q86TA4 180 aa11.18□□□□□ -0.62
USHBP1-206ENST00000596436 LINC00612Q8N6U2 182 aa11.18□□□□□ -0.62
USHBP1-206ENST00000596436 ZNF680Q8NEM1 530 aa11.18□□□□□ -0.62
USHBP1-206ENST00000596436 NDFIP1Q9BT67 221 aa11.18□□□□□ -0.62
USHBP1-206ENST00000596436 KLF12Q9Y4X4 402 aa11.18□□□□□ -0.62
USHBP1-206ENST00000596436 TRAV1-1A0A0B4J248 108 aa11.17□□□□□ -0.62
USHBP1-206ENST00000596436 TCL1AP56279 114 aa11.17□□□□□ -0.62
USHBP1-206ENST00000596436 DAZ2Q13117 558 aaKnown RBP11.17□□□□□ -0.62
USHBP1-206ENST00000596436 SOHLH1Q5JUK2 328 aa11.17□□□□□ -0.62
USHBP1-206ENST00000596436 IBA57Q5T440 356 aaKnown RBP11.17□□□□□ -0.62
USHBP1-206ENST00000596436 UBE2DNLQ8IWF7 75 aa11.17□□□□□ -0.62
USHBP1-206ENST00000596436 HIST1H2BAQ96A08 127 aa11.17□□□□□ -0.62
USHBP1-206ENST00000596436 NAGKQ9UJ70 344 aa11.17□□□□□ -0.62
USHBP1-206ENST00000596436 APOBP04114 4563 aaKnown RBP11.17□□□□□ -0.62
USHBP1-206ENST00000596436 TRAV21A0A0B4J279 112 aa11.16□□□□□ -0.62
USHBP1-206ENST00000596436 GAGE12BA1L429 117 aa11.16□□□□□ -0.62
USHBP1-206ENST00000596436 FBLL1A6NHQ2 334 aaKnown RBP11.16□□□□□ -0.62
USHBP1-206ENST00000596436 GAGE7O76087 117 aa11.16□□□□□ -0.62
USHBP1-206ENST00000596436 GAGE12FP0CL80 117 aa11.16□□□□□ -0.62
USHBP1-206ENST00000596436 GAGE12GP0CL81 117 aa11.16□□□□□ -0.62
USHBP1-206ENST00000596436 GAGE12IP0CL82 117 aa11.16□□□□□ -0.62
USHBP1-206ENST00000596436 ALKAL2Q6UX46 152 aa11.16□□□□□ -0.62
USHBP1-206ENST00000596436 Q6ZTI0 123 aa11.16□□□□□ -0.62
USHBP1-206ENST00000596436 C11orf21Q9P2W6 132 aa11.16□□□□□ -0.62
USHBP1-206ENST00000596436 GCGP01275 180 aa11.15□□□□□ -0.62
USHBP1-206ENST00000596436 FAM3BP58499 235 aaPredicted RBP11.15□□□□□ -0.62
USHBP1-206ENST00000596436 TMEM183BQ1AE95 376 aa11.15□□□□□ -0.62
USHBP1-206ENST00000596436 TDRG1Q3Y452 100 aa11.15□□□□□ -0.62
USHBP1-206ENST00000596436 C1orf134Q5TEV5 83 aa11.15□□□□□ -0.62
USHBP1-206ENST00000596436 FAM159AQ6UWV7 190 aa11.15□□□□□ -0.62
USHBP1-206ENST00000596436 TMEM183AQ8IXX5 376 aa11.15□□□□□ -0.62
USHBP1-206ENST00000596436 TCEAL7Q9BRU2 100 aa11.15□□□□□ -0.62
USHBP1-206ENST00000596436 MDFICQ9P1T7 246 aa11.15□□□□□ -0.62
USHBP1-206ENST00000596436 GNG13Q9P2W3 67 aa11.15□□□□□ -0.62
USHBP1-206ENST00000596436 DNAH5Q8TE73 4624 aa11.14□□□□□ -0.63
USHBP1-206ENST00000596436 SCO2A0A1W2PP80 73 aa11.14□□□□□ -0.63
USHBP1-206ENST00000596436 SPINK4O60575 86 aa11.14□□□□□ -0.63
USHBP1-206ENST00000596436 PPT1P50897 306 aa11.14□□□□□ -0.63
USHBP1-206ENST00000596436 ZNF415Q09FC8 603 aa11.14□□□□□ -0.63
USHBP1-206ENST00000596436 SMUG1Q53HV7 270 aa11.14□□□□□ -0.63
USHBP1-206ENST00000596436 SAPCD1Q5SSQ6 148 aa11.14□□□□□ -0.63
USHBP1-206ENST00000596436 TMEM88Q6PEY1 159 aa11.14□□□□□ -0.63
USHBP1-206ENST00000596436 TRBV6-1A0A0K0K1D8 114 aa11.13□□□□□ -0.63
USHBP1-206ENST00000596436 GNRH2O43555 120 aa11.13□□□□□ -0.63
USHBP1-206ENST00000596436 CDK2AP2O75956 126 aa11.13□□□□□ -0.63
USHBP1-206ENST00000596436 TYMSP04818 313 aa11.13□□□□□ -0.63
USHBP1-206ENST00000596436 ATP5G1P05496 136 aa11.13□□□□□ -0.63
USHBP1-206ENST00000596436 PFN1P07737 140 aaKnown RBP11.13□□□□□ -0.63
USHBP1-206ENST00000596436 AKR1C3P42330 323 aa11.13□□□□□ -0.63
USHBP1-206ENST00000596436 FMC1Q96HJ9 113 aa11.13□□□□□ -0.63
USHBP1-206ENST00000596436 MANBALQ9NQG1 85 aa11.13□□□□□ -0.63
USHBP1-206ENST00000596436 MRPL16Q9NX20 251 aaKnown RBP11.13□□□□□ -0.63
USHBP1-206ENST00000596436 TRGV11A0A075B6L2 103 aa11.12□□□□□ -0.63
USHBP1-206ENST00000596436 TRGV1A0A0A0MS02 117 aa11.12□□□□□ -0.63
USHBP1-206ENST00000596436 IGHV3-16A0A0C4DH30 117 aa11.12□□□□□ -0.63
USHBP1-206ENST00000596436 F5H768 121 aa11.12□□□□□ -0.63
USHBP1-206ENST00000596436 UBE2G1P62253 170 aa11.12□□□□□ -0.63
USHBP1-206ENST00000596436 C15orf53Q8NAA6 179 aa11.12□□□□□ -0.63
USHBP1-206ENST00000596436 ZC2HC1AQ96GY0 325 aa11.12□□□□□ -0.63
USHBP1-206ENST00000596436 LTAP01374 205 aa11.11□□□□□ -0.63
USHBP1-206ENST00000596436 HOXA5P20719 270 aa11.11□□□□□ -0.63
USHBP1-206ENST00000596436 CRIP1P50238 77 aa11.11□□□□□ -0.63
USHBP1-206ENST00000596436 TEX46H3BTG2 121 aa11.1□□□□□ -0.63
USHBP1-206ENST00000596436 TNP2Q05952 138 aa11.1□□□□□ -0.63
USHBP1-206ENST00000596436 COX8CQ7Z4L0 72 aa11.1□□□□□ -0.63
USHBP1-206ENST00000596436 C18orf15Q96N68 181 aa11.1□□□□□ -0.63
USHBP1-206ENST00000596436 SDF2L1Q9HCN8 221 aa11.1□□□□□ -0.63
USHBP1-206ENST00000596436 ZFP30Q9Y2G7 519 aa11.1□□□□□ -0.63
USHBP1-206ENST00000596436 NHLRC2Q8NBF2 726 aa11.09□□□□□ -0.63
USHBP1-206ENST00000596436 ZNRF2Q8NHG8 242 aa11.09□□□□□ -0.63
USHBP1-206ENST00000596436 C11orf52Q96A22 123 aa11.09□□□□□ -0.63
USHBP1-206ENST00000596436 KCNS1Q96KK3 526 aa11.09□□□□□ -0.63
USHBP1-206ENST00000596436 TRGV2A0A075B6R0 118 aa11.08□□□□□ -0.64
USHBP1-206ENST00000596436 IGKV3D-20A0A0C4DH25 116 aa11.08□□□□□ -0.64
USHBP1-206ENST00000596436 BCL2P10415 239 aa11.08□□□□□ -0.64
USHBP1-206ENST00000596436 DERL1Q9BUN8 251 aa11.08□□□□□ -0.64
USHBP1-206ENST00000596436 NBDYA0A0U1RRE5 68 aa11.07□□□□□ -0.64
USHBP1-206ENST00000596436 FABP5P3A8MUU1 101 aa11.07□□□□□ -0.64
USHBP1-206ENST00000596436 SH2D1AO60880 128 aa11.07□□□□□ -0.64
USHBP1-206ENST00000596436 MEF2BQ02080 365 aaPredicted RBP11.07□□□□□ -0.64
USHBP1-206ENST00000596436 SPXQ9BT56 116 aa11.07□□□□□ -0.64
USHBP1-206ENST00000596436 C16orf90A8MZG2 172 aa11.06□□□□□ -0.64
USHBP1-206ENST00000596436 IFNA1P01562 189 aa11.06□□□□□ -0.64
USHBP1-206ENST00000596436 IGHV3-53P01767 116 aa11.06□□□□□ -0.64
USHBP1-206ENST00000596436 S100A9P06702 114 aaKnown RBP11.06□□□□□ -0.64
USHBP1-206ENST00000596436 RPL35P42766 123 aaKnown RBP11.06□□□□□ -0.64
USHBP1-206ENST00000596436 OR5I1Q13606 314 aa11.06□□□□□ -0.64
USHBP1-206ENST00000596436 ZNF674Q2M3X9 581 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms