RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 SAPCD1Q5SSQ6 148 aa9.72□□□□□ -0.85
SHKBP1-207ENST00000595631 IBA57Q5T440 356 aaKnown RBP9.72□□□□□ -0.85
SHKBP1-207ENST00000595631 TMEM88Q6PEY1 159 aa9.72□□□□□ -0.85
SHKBP1-207ENST00000595631 MANBALQ9NQG1 85 aa9.72□□□□□ -0.85
SHKBP1-207ENST00000595631 MUC4Q99102 2169 aa9.72□□□□□ -0.85
SHKBP1-207ENST00000595631 SACSQ9NZJ4 4579 aa9.71□□□□□ -0.85
SHKBP1-207ENST00000595631 F5H768 121 aa9.71□□□□□ -0.86
SHKBP1-207ENST00000595631 SPINK4O60575 86 aa9.71□□□□□ -0.86
SHKBP1-207ENST00000595631 ATP5G1P05496 136 aa9.71□□□□□ -0.86
SHKBP1-207ENST00000595631 TDRG1Q3Y452 100 aa9.71□□□□□ -0.86
SHKBP1-207ENST00000595631 NHLRC2Q8NBF2 726 aa9.71□□□□□ -0.86
SHKBP1-207ENST00000595631 ZC2HC1AQ96GY0 325 aa9.71□□□□□ -0.86
SHKBP1-207ENST00000595631 FMC1Q96HJ9 113 aa9.71□□□□□ -0.86
SHKBP1-207ENST00000595631 TCEAL7Q9BRU2 100 aa9.71□□□□□ -0.86
SHKBP1-207ENST00000595631 TRGV11A0A075B6L2 103 aa9.7□□□□□ -0.86
SHKBP1-207ENST00000595631 IGHV3-16A0A0C4DH30 117 aa9.7□□□□□ -0.86
SHKBP1-207ENST00000595631 TEX46H3BTG2 121 aa9.7□□□□□ -0.86
SHKBP1-207ENST00000595631 PFN1P07737 140 aaKnown RBP9.7□□□□□ -0.86
SHKBP1-207ENST00000595631 CRIP1P50238 77 aa9.7□□□□□ -0.86
SHKBP1-207ENST00000595631 TRBV6-1A0A0K0K1D8 114 aa9.69□□□□□ -0.86
SHKBP1-207ENST00000595631 LTAP01374 205 aa9.69□□□□□ -0.86
SHKBP1-207ENST00000595631 HOXA5P20719 270 aa9.69□□□□□ -0.86
SHKBP1-207ENST00000595631 NDUFAF3Q9BU61 184 aa9.69□□□□□ -0.86
SHKBP1-207ENST00000595631 DERL1Q9BUN8 251 aa9.69□□□□□ -0.86
SHKBP1-207ENST00000595631 SDF2L1Q9HCN8 221 aa9.69□□□□□ -0.86
SHKBP1-207ENST00000595631 TRGV2A0A075B6R0 118 aa9.68□□□□□ -0.86
SHKBP1-207ENST00000595631 IGKV3D-20A0A0C4DH25 116 aa9.68□□□□□ -0.86
SHKBP1-207ENST00000595631 SH2D1AO60880 128 aa9.68□□□□□ -0.86
SHKBP1-207ENST00000595631 IGHV3-53P01767 116 aa9.68□□□□□ -0.86
SHKBP1-207ENST00000595631 BCL2P10415 239 aa9.68□□□□□ -0.86
SHKBP1-207ENST00000595631 TCTAP57738 103 aa9.68□□□□□ -0.86
SHKBP1-207ENST00000595631 KCNS1Q96KK3 526 aa9.68□□□□□ -0.86
SHKBP1-207ENST00000595631 ZFP30Q9Y2G7 519 aa9.68□□□□□ -0.86
SHKBP1-207ENST00000595631 FABP5P3A8MUU1 101 aa9.67□□□□□ -0.86
SHKBP1-207ENST00000595631 IFNA1P01562 189 aa9.67□□□□□ -0.86
SHKBP1-207ENST00000595631 MEF2BQ02080 365 aaPredicted RBP9.67□□□□□ -0.86
SHKBP1-207ENST00000595631 OR5I1Q13606 314 aa9.67□□□□□ -0.86
SHKBP1-207ENST00000595631 C11orf52Q96A22 123 aa9.67□□□□□ -0.86
SHKBP1-207ENST00000595631 A0A0J9YY99 117 aa9.66□□□□□ -0.86
SHKBP1-207ENST00000595631 M0R036 132 aa9.66□□□□□ -0.86
SHKBP1-207ENST00000595631 RPL35P42766 123 aaKnown RBP9.66□□□□□ -0.86
SHKBP1-207ENST00000595631 BLOC1S1P78537 153 aa9.66□□□□□ -0.86
SHKBP1-207ENST00000595631 LGALS9BQ3B8N2 356 aa9.66□□□□□ -0.86
SHKBP1-207ENST00000595631 LGALS9CQ6DKI2 356 aa9.66□□□□□ -0.86
SHKBP1-207ENST00000595631 COX8CQ7Z4L0 72 aa9.66□□□□□ -0.86
SHKBP1-207ENST00000595631 FAM210BQ96KR6 192 aa9.66□□□□□ -0.86
SHKBP1-207ENST00000595631 SPXQ9BT56 116 aa9.66□□□□□ -0.86
SHKBP1-207ENST00000595631 TRAV26-1A0A087WT03 109 aa9.65□□□□□ -0.86
SHKBP1-207ENST00000595631 RAB19A4D1S5 217 aa9.65□□□□□ -0.86
SHKBP1-207ENST00000595631 ORM1P02763 201 aa9.65□□□□□ -0.86
SHKBP1-207ENST00000595631 S100A9P06702 114 aaKnown RBP9.65□□□□□ -0.86
SHKBP1-207ENST00000595631 ZNF674Q2M3X9 581 aa9.65□□□□□ -0.86
SHKBP1-207ENST00000595631 FAM162BQ5T6X4 162 aa9.65□□□□□ -0.86
SHKBP1-207ENST00000595631 BAGE2Q86Y30 109 aa9.65□□□□□ -0.86
SHKBP1-207ENST00000595631 PCNPQ8WW12 178 aaKnown RBP9.65□□□□□ -0.86
SHKBP1-207ENST00000595631 C18orf15Q96N68 181 aa9.65□□□□□ -0.86
SHKBP1-207ENST00000595631 VAX2Q9UIW0 290 aa9.65□□□□□ -0.86
SHKBP1-207ENST00000595631 TMSB15BA0A087X1C1 80 aa9.64□□□□□ -0.87
SHKBP1-207ENST00000595631 B4DEV8 164 aa9.64□□□□□ -0.87
SHKBP1-207ENST00000595631 KRBOX1C9JBD0 128 aa9.64□□□□□ -0.87
SHKBP1-207ENST00000595631 M0R2P5 195 aa9.64□□□□□ -0.87
SHKBP1-207ENST00000595631 NUDT3O95989 172 aa9.64□□□□□ -0.87
SHKBP1-207ENST00000595631 SFTA3P0C7M3 94 aa9.64□□□□□ -0.87
SHKBP1-207ENST00000595631 RNASE3P12724 160 aaKnown RBP9.64□□□□□ -0.87
SHKBP1-207ENST00000595631 CENPWQ5EE01 88 aa9.64□□□□□ -0.87
SHKBP1-207ENST00000595631 POM121L12Q8N7R1 296 aa9.64□□□□□ -0.87
SHKBP1-207ENST00000595631 LYPD6BQ8NI32 183 aa9.64□□□□□ -0.87
SHKBP1-207ENST00000595631 C9orf85Q96MD7 179 aa9.64□□□□□ -0.87
SHKBP1-207ENST00000595631 TXNDC17Q9BRA2 123 aa9.64□□□□□ -0.87
SHKBP1-207ENST00000595631 MLST8Q9BVC4 326 aa9.64□□□□□ -0.87
SHKBP1-207ENST00000595631 VPS13DQ5THJ4 4388 aa9.64□□□□□ -0.87
SHKBP1-207ENST00000595631 GRIFINA4D1Z8 144 aa9.63□□□□□ -0.87
SHKBP1-207ENST00000595631 C9JCJ5 164 aa9.63□□□□□ -0.87
SHKBP1-207ENST00000595631 RPL19P84098 196 aaKnown RBP9.63□□□□□ -0.87
SHKBP1-207ENST00000595631 PRR27Q6MZM9 219 aa9.63□□□□□ -0.87
SHKBP1-207ENST00000595631 ZNF575Q86XF7 245 aa9.63□□□□□ -0.87
SHKBP1-207ENST00000595631 RASL10AQ92737 203 aa9.63□□□□□ -0.87
SHKBP1-207ENST00000595631 ZNF479Q96JC4 524 aa9.63□□□□□ -0.87
SHKBP1-207ENST00000595631 MED9Q9NWA0 146 aa9.63□□□□□ -0.87
SHKBP1-207ENST00000595631 RBFOX3A6NFN3 312 aa9.62□□□□□ -0.87
SHKBP1-207ENST00000595631 PGPEP1LA6NFU8 196 aa9.62□□□□□ -0.87
SHKBP1-207ENST00000595631 H3BVH4 76 aa9.62□□□□□ -0.87
SHKBP1-207ENST00000595631 PDE6DO43924 150 aa9.62□□□□□ -0.87
SHKBP1-207ENST00000595631 IGLV2-8P01709 118 aa9.62□□□□□ -0.87
SHKBP1-207ENST00000595631 FHL2Q14192 279 aa9.62□□□□□ -0.87
SHKBP1-207ENST00000595631 C15orf53Q8NAA6 179 aa9.62□□□□□ -0.87
SHKBP1-207ENST00000595631 VSIG2Q96IQ7 327 aa9.62□□□□□ -0.87
SHKBP1-207ENST00000595631 RYR3Q15413 4870 aa9.62□□□□□ -0.87
SHKBP1-207ENST00000595631 HYDINQ4G0P3 5121 aa9.62□□□□□ -0.87
SHKBP1-207ENST00000595631 TRBV20OR9-2A0A075B6H5 130 aa9.61□□□□□ -0.87
SHKBP1-207ENST00000595631 TAGLN2P37802 199 aaKnown RBP9.61□□□□□ -0.87
SHKBP1-207ENST00000595631 ASIPP42127 132 aa9.61□□□□□ -0.87
SHKBP1-207ENST00000595631 LINC01559Q495D7 138 aa9.61□□□□□ -0.87
SHKBP1-207ENST00000595631 ZNF876PQ49A33 203 aa9.61□□□□□ -0.87
SHKBP1-207ENST00000595631 TOR2AQ5JU69 321 aa9.61□□□□□ -0.87
SHKBP1-207ENST00000595631 ZNF506Q5JVG8 444 aa9.61□□□□□ -0.87
SHKBP1-207ENST00000595631 TEX261Q6UWH6 196 aa9.61□□□□□ -0.87
SHKBP1-207ENST00000595631 RYR2Q92736 4967 aa9.61□□□□□ -0.87
SHKBP1-207ENST00000595631 TRAV4A0A0B4J268 109 aa9.6□□□□□ -0.87
SHKBP1-207ENST00000595631 P0DMU3 169 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms